RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 TP53AIP1Q9HCN2 124 aa3.78□□□□□ -1.8
CEACAM1-207ENST00000403444 FAT1Q14517 4588 aa3.78□□□□□ -1.8
CEACAM1-207ENST00000403444 K7ERS5 55 aa3.77□□□□□ -1.81
CEACAM1-207ENST00000403444 SPRR1BP22528 89 aa3.77□□□□□ -1.81
CEACAM1-207ENST00000403444 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
CEACAM1-207ENST00000403444 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
CEACAM1-207ENST00000403444 KRTAP13-1Q8IUC0 172 aa3.76□□□□□ -1.81
CEACAM1-207ENST00000403444 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
CEACAM1-207ENST00000403444 LINC00304Q8N9R0 145 aa3.76□□□□□ -1.81
CEACAM1-207ENST00000403444 HERC2O95714 4834 aa3.75□□□□□ -1.81
CEACAM1-207ENST00000403444 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
CEACAM1-207ENST00000403444 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
CEACAM1-207ENST00000403444 BIRC6Q9NR09 4857 aa3.74□□□□□ -1.81
CEACAM1-207ENST00000403444 KRTAP17-1Q9BYP8 105 aa3.73□□□□□ -1.81
CEACAM1-207ENST00000403444 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.81
CEACAM1-207ENST00000403444 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.82
CEACAM1-207ENST00000403444 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
CEACAM1-207ENST00000403444 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
CEACAM1-207ENST00000403444 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
CEACAM1-207ENST00000403444 H0YAA0 97 aa3.62□□□□□ -1.83
CEACAM1-207ENST00000403444 A0A0D9SG42 100 aa3.6□□□□□ -1.83
CEACAM1-207ENST00000403444 LRP1Q07954 4544 aaKnown RBP3.6□□□□□ -1.83
CEACAM1-207ENST00000403444 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.83
CEACAM1-207ENST00000403444 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
CEACAM1-207ENST00000403444 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
CEACAM1-207ENST00000403444 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
CEACAM1-207ENST00000403444 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
CEACAM1-207ENST00000403444 A0A1B0GU33 70 aa3.56□□□□□ -1.84
CEACAM1-207ENST00000403444 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
CEACAM1-207ENST00000403444 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
CEACAM1-207ENST00000403444 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
CEACAM1-207ENST00000403444 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
CEACAM1-207ENST00000403444 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
CEACAM1-207ENST00000403444 HMCN2Q8NDA2 5059 aa3.46□□□□□ -1.86
CEACAM1-207ENST00000403444 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
CEACAM1-207ENST00000403444 Q5VSD8 79 aa3.43□□□□□ -1.86
CEACAM1-207ENST00000403444 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
CEACAM1-207ENST00000403444 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
CEACAM1-207ENST00000403444 KRTAP3-1Q9BYR8 98 aa3.41□□□□□ -1.86
CEACAM1-207ENST00000403444 LPAP08519 4548 aa3.39□□□□□ -1.87
CEACAM1-207ENST00000403444 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
CEACAM1-207ENST00000403444 HERC1Q15751 4861 aa3.37□□□□□ -1.87
CEACAM1-207ENST00000403444 S4R3F8 94 aa3.35□□□□□ -1.87
CEACAM1-207ENST00000403444 XP32Q5T750 250 aa3.32□□□□□ -1.88
CEACAM1-207ENST00000403444 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
CEACAM1-207ENST00000403444 LRP2P98164 4655 aa3.31□□□□□ -1.88
CEACAM1-207ENST00000403444 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
CEACAM1-207ENST00000403444 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
CEACAM1-207ENST00000403444 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
CEACAM1-207ENST00000403444 M0QZ58 72 aa3.25□□□□□ -1.89
CEACAM1-207ENST00000403444 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
CEACAM1-207ENST00000403444 KRTAP12-2P59991 146 aa3.22□□□□□ -1.89
CEACAM1-207ENST00000403444 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
CEACAM1-207ENST00000403444 R4GN34 69 aa3.22□□□□□ -1.89
CEACAM1-207ENST00000403444 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
CEACAM1-207ENST00000403444 MUC2Q02817 5179 aa3.21□□□□□ -1.89
CEACAM1-207ENST00000403444 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
CEACAM1-207ENST00000403444 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
CEACAM1-207ENST00000403444 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
CEACAM1-207ENST00000403444 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
CEACAM1-207ENST00000403444 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
CEACAM1-207ENST00000403444 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
CEACAM1-207ENST00000403444 KRTAP12-1P59990 96 aa3.12□□□□□ -1.91
CEACAM1-207ENST00000403444 M0R2T5 61 aa3.08□□□□□ -1.92
CEACAM1-207ENST00000403444 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
CEACAM1-207ENST00000403444 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
CEACAM1-207ENST00000403444 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
CEACAM1-207ENST00000403444 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
CEACAM1-207ENST00000403444 INE1O15225 51 aa3□□□□□ -1.93
CEACAM1-207ENST00000403444 KRTAP9-2Q9BYQ4 174 aa2.98□□□□□ -1.93
CEACAM1-207ENST00000403444 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
CEACAM1-207ENST00000403444 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
CEACAM1-207ENST00000403444 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
CEACAM1-207ENST00000403444 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
CEACAM1-207ENST00000403444 PP632Q6XCG6 107 aa2.93□□□□□ -1.94
CEACAM1-207ENST00000403444 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
CEACAM1-207ENST00000403444 MT1HP80294 61 aa2.92□□□□□ -1.94
CEACAM1-207ENST00000403444 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
CEACAM1-207ENST00000403444 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
CEACAM1-207ENST00000403444 TNP1P09430 55 aa2.86□□□□□ -1.95
CEACAM1-207ENST00000403444 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
CEACAM1-207ENST00000403444 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
CEACAM1-207ENST00000403444 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
CEACAM1-207ENST00000403444 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
CEACAM1-207ENST00000403444 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
CEACAM1-207ENST00000403444 USH2AO75445 5202 aa2.77□□□□□ -1.97
CEACAM1-207ENST00000403444 MT2AP02795 61 aa2.77□□□□□ -1.97
CEACAM1-207ENST00000403444 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
CEACAM1-207ENST00000403444 MT1FP04733 61 aa2.75□□□□□ -1.97
CEACAM1-207ENST00000403444 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
CEACAM1-207ENST00000403444 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
CEACAM1-207ENST00000403444 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
CEACAM1-207ENST00000403444 LCE3AQ5TA76 89 aa2.71□□□□□ -1.97
CEACAM1-207ENST00000403444 KMT2DO14686 5537 aa2.71□□□□□ -1.98
CEACAM1-207ENST00000403444 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
CEACAM1-207ENST00000403444 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
CEACAM1-207ENST00000403444 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
CEACAM1-207ENST00000403444 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
CEACAM1-207ENST00000403444 MT1BP07438 61 aa2.64□□□□□ -1.99
CEACAM1-207ENST00000403444 KRTAP4-7Q9BYR0 210 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms