RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
CCDC47-202ENST00000403162 FAT3Q8TDW7 4589 aa10.64□□□□□ -0.71
CCDC47-202ENST00000403162 H0YAA0 97 aa10.63□□□□□ -0.71
CCDC47-202ENST00000403162 MYCBP2O75592 4640 aa10.61□□□□□ -0.71
CCDC47-202ENST00000403162 ABCA13Q86UQ4 5058 aa10.59□□□□□ -0.71
CCDC47-202ENST00000403162 CSAG1Q6PB30 78 aa10.59□□□□□ -0.71
CCDC47-202ENST00000403162 TNXBP22105 4242 aa10.57□□□□□ -0.72
CCDC47-202ENST00000403162 MT1HL1P0DM35 61 aa10.56□□□□□ -0.72
CCDC47-202ENST00000403162 A0A1B0GU33 70 aa10.56□□□□□ -0.72
CCDC47-202ENST00000403162 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.72
CCDC47-202ENST00000403162 COX6B2Q6YFQ2 88 aa10.46□□□□□ -0.74
CCDC47-202ENST00000403162 J3QL48 77 aa10.43□□□□□ -0.74
CCDC47-202ENST00000403162 DMBT1Q9UGM3 2413 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-202ENST00000403162 PCLOQ9Y6V0 5065 aa10.34□□□□□ -0.75
CCDC47-202ENST00000403162 KRTAP25-1Q3LHN0 102 aa10.32□□□□□ -0.76
CCDC47-202ENST00000403162 K7ERS5 55 aa10.28□□□□□ -0.76
CCDC47-202ENST00000403162 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
CCDC47-202ENST00000403162 KRTAP10-6P60371 365 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-202ENST00000403162 RPL37P61927 97 aaKnown RBP10.16□□□□□ -0.78
CCDC47-202ENST00000403162 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
CCDC47-202ENST00000403162 ROMO1P60602 79 aa10.08□□□□□ -0.8
CCDC47-202ENST00000403162 KRTAP13-4Q3LI77 160 aa10.07□□□□□ -0.8
CCDC47-202ENST00000403162 S4R3F8 94 aa10.07□□□□□ -0.8
CCDC47-202ENST00000403162 XP32Q5T750 250 aa10.06□□□□□ -0.8
CCDC47-202ENST00000403162 HERC1Q15751 4861 aa10.03□□□□□ -0.8
CCDC47-202ENST00000403162 TPRXLQ17RH7 258 aa10.02□□□□□ -0.81
CCDC47-202ENST00000403162 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
CCDC47-202ENST00000403162 A0A0D9SG42 100 aa9.97□□□□□ -0.81
CCDC47-202ENST00000403162 LPAP08519 4548 aa9.94□□□□□ -0.82
CCDC47-202ENST00000403162 P0C880 135 aa9.92□□□□□ -0.82
CCDC47-202ENST00000403162 H3BS24 57 aa9.88□□□□□ -0.83
CCDC47-202ENST00000403162 HMCN2Q8NDA2 5059 aa9.86□□□□□ -0.83
CCDC47-202ENST00000403162 LRP2P98164 4655 aa9.81□□□□□ -0.84
CCDC47-202ENST00000403162 KRTAP12-2P59991 146 aa9.76□□□□□ -0.85
CCDC47-202ENST00000403162 KRTAP12-1P59990 96 aa9.71□□□□□ -0.86
CCDC47-202ENST00000403162 SEC61BP60468 96 aaKnown RBP9.7□□□□□ -0.86
CCDC47-202ENST00000403162 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
CCDC47-202ENST00000403162 M0QZ58 72 aa9.65□□□□□ -0.86
CCDC47-202ENST00000403162 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
CCDC47-202ENST00000403162 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
CCDC47-202ENST00000403162 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
CCDC47-202ENST00000403162 KRTAP15-1Q3LI76 137 aa9.46□□□□□ -0.89
CCDC47-202ENST00000403162 UBR4Q5T4S7 5183 aa9.44□□□□□ -0.9
CCDC47-202ENST00000403162 MUC2Q02817 5179 aa9.35□□□□□ -0.91
CCDC47-202ENST00000403162 R4GN34 69 aa9.33□□□□□ -0.92
CCDC47-202ENST00000403162 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
CCDC47-202ENST00000403162 NDUFAF8A1L188 74 aa9.23□□□□□ -0.93
CCDC47-202ENST00000403162 KRTAP19-2Q3LHN2 52 aa9.17□□□□□ -0.94
CCDC47-202ENST00000403162 LORP23490 312 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-202ENST00000403162 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
CCDC47-202ENST00000403162 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
CCDC47-202ENST00000403162 FLGP20930 4061 aaPredicted RBP8.96□□□□□ -0.97
CCDC47-202ENST00000403162 PLAC4Q8WY50 150 aa8.96□□□□□ -0.98
CCDC47-202ENST00000403162 MT1HP80294 61 aa8.92□□□□□ -0.98
CCDC47-202ENST00000403162 PP632Q6XCG6 107 aa8.9□□□□□ -0.98
CCDC47-202ENST00000403162 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
CCDC47-202ENST00000403162 M0R2T5 61 aa8.86□□□□□ -0.99
CCDC47-202ENST00000403162 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
CCDC47-202ENST00000403162 KRTAP23-1A1A580 65 aa8.61□□□□□ -1.03
CCDC47-202ENST00000403162 TNP1P09430 55 aa8.59□□□□□ -1.03
CCDC47-202ENST00000403162 LUZP6Q538Z0 58 aa8.58□□□□□ -1.04
CCDC47-202ENST00000403162 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
CCDC47-202ENST00000403162 MT2AP02795 61 aa8.51□□□□□ -1.05
CCDC47-202ENST00000403162 KRTAP10-10P60014 251 aa8.47□□□□□ -1.05
CCDC47-202ENST00000403162 MT1FP04733 61 aa8.46□□□□□ -1.05
CCDC47-202ENST00000403162 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
CCDC47-202ENST00000403162 SPRR5A0A1B0GTR4 108 aa8.38□□□□□ -1.07
CCDC47-202ENST00000403162 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
CCDC47-202ENST00000403162 A0A0A0MQY5 61 aa8.26□□□□□ -1.09
CCDC47-202ENST00000403162 KRTAP9-3Q9BYQ3 159 aa8.25□□□□□ -1.09
CCDC47-202ENST00000403162 LCE3AQ5TA76 89 aa8.11□□□□□ -1.11
CCDC47-202ENST00000403162 LCE2BO14633 110 aa8.06□□□□□ -1.12
CCDC47-202ENST00000403162 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
CCDC47-202ENST00000403162 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
CCDC47-202ENST00000403162 MT1BP07438 61 aa7.95□□□□□ -1.14
CCDC47-202ENST00000403162 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
CCDC47-202ENST00000403162 USH2AO75445 5202 aa7.89□□□□□ -1.15
CCDC47-202ENST00000403162 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
CCDC47-202ENST00000403162 MT1XP80297 61 aa7.84□□□□□ -1.15
CCDC47-202ENST00000403162 KRTAP9-2Q9BYQ4 174 aa7.81□□□□□ -1.16
CCDC47-202ENST00000403162 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
CCDC47-202ENST00000403162 FSIP2Q5CZC0 6907 aa7.74□□□□□ -1.17
CCDC47-202ENST00000403162 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
CCDC47-202ENST00000403162 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
CCDC47-202ENST00000403162 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
CCDC47-202ENST00000403162 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
CCDC47-202ENST00000403162 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
CCDC47-202ENST00000403162 INE1O15225 51 aa7.51□□□□□ -1.21
CCDC47-202ENST00000403162 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
CCDC47-202ENST00000403162 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
CCDC47-202ENST00000403162 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
CCDC47-202ENST00000403162 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
CCDC47-202ENST00000403162 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
CCDC47-202ENST00000403162 KMT2DO14686 5537 aa7.13□□□□□ -1.27
CCDC47-202ENST00000403162 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
CCDC47-202ENST00000403162 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
CCDC47-202ENST00000403162 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
CCDC47-202ENST00000403162 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
CCDC47-202ENST00000403162 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
CCDC47-202ENST00000403162 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms