RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 ROMO1P60602 79 aa8.93□□□□□ -0.98
SNRNP70-202ENST00000401730 FAT3Q8TDW7 4589 aa8.93□□□□□ -0.98
SNRNP70-202ENST00000401730 K7ERS5 55 aa8.91□□□□□ -0.98
SNRNP70-202ENST00000401730 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
SNRNP70-202ENST00000401730 Q5VSD8 79 aa8.9□□□□□ -0.98
SNRNP70-202ENST00000401730 KIAA1109Q2LD37 5005 aa8.89□□□□□ -0.99
SNRNP70-202ENST00000401730 A0A0D9SG42 100 aa8.89□□□□□ -0.99
SNRNP70-202ENST00000401730 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
SNRNP70-202ENST00000401730 TNXBP22105 4242 aa8.85□□□□□ -0.99
SNRNP70-202ENST00000401730 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
SNRNP70-202ENST00000401730 RYR3Q15413 4870 aa8.84□□□□□ -0.99
SNRNP70-202ENST00000401730 LPAP08519 4548 aa8.81□□□□□ -1
SNRNP70-202ENST00000401730 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
SNRNP70-202ENST00000401730 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
SNRNP70-202ENST00000401730 XP32Q5T750 250 aa8.76□□□□□ -1.01
SNRNP70-202ENST00000401730 LRP2P98164 4655 aa8.73□□□□□ -1.01
SNRNP70-202ENST00000401730 RYR1P21817 5038 aa8.72□□□□□ -1.01
SNRNP70-202ENST00000401730 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.01
SNRNP70-202ENST00000401730 P0C880 135 aa8.71□□□□□ -1.01
SNRNP70-202ENST00000401730 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.01
SNRNP70-202ENST00000401730 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
SNRNP70-202ENST00000401730 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
SNRNP70-202ENST00000401730 S4R3F8 94 aa8.66□□□□□ -1.02
SNRNP70-202ENST00000401730 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
SNRNP70-202ENST00000401730 EPPK1P58107 5090 aaKnown RBP8.59□□□□□ -1.04
SNRNP70-202ENST00000401730 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
SNRNP70-202ENST00000401730 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SNRNP70-202ENST00000401730 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
SNRNP70-202ENST00000401730 MT1HL1P0DM35 61 aa8.56□□□□□ -1.04
SNRNP70-202ENST00000401730 NDUFAF8A1L188 74 aa8.51□□□□□ -1.05
SNRNP70-202ENST00000401730 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
SNRNP70-202ENST00000401730 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
SNRNP70-202ENST00000401730 MUC2Q02817 5179 aa8.27□□□□□ -1.09
SNRNP70-202ENST00000401730 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
SNRNP70-202ENST00000401730 KRTAP15-1Q3LI76 137 aa8.24□□□□□ -1.09
SNRNP70-202ENST00000401730 M0QZ58 72 aa8.22□□□□□ -1.09
SNRNP70-202ENST00000401730 R4GN34 69 aa8.14□□□□□ -1.11
SNRNP70-202ENST00000401730 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
SNRNP70-202ENST00000401730 J3QL48 77 aa8.13□□□□□ -1.11
SNRNP70-202ENST00000401730 KRTAP4-1Q9BYQ7 146 aa8.12□□□□□ -1.11
SNRNP70-202ENST00000401730 HERC2O95714 4834 aa8.11□□□□□ -1.11
SNRNP70-202ENST00000401730 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
SNRNP70-202ENST00000401730 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
SNRNP70-202ENST00000401730 HERC1Q15751 4861 aa7.89□□□□□ -1.15
SNRNP70-202ENST00000401730 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
SNRNP70-202ENST00000401730 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
SNRNP70-202ENST00000401730 CAMK2N1Q7Z7J9 78 aa7.8□□□□□ -1.16
SNRNP70-202ENST00000401730 PCLOQ9Y6V0 5065 aa7.74□□□□□ -1.17
SNRNP70-202ENST00000401730 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
SNRNP70-202ENST00000401730 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
SNRNP70-202ENST00000401730 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
SNRNP70-202ENST00000401730 A0A0A0MQY5 61 aa7.67□□□□□ -1.18
SNRNP70-202ENST00000401730 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
SNRNP70-202ENST00000401730 BIRC6Q9NR09 4857 aa7.58□□□□□ -1.2
SNRNP70-202ENST00000401730 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
SNRNP70-202ENST00000401730 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
SNRNP70-202ENST00000401730 M0R2T5 61 aa7.5□□□□□ -1.21
SNRNP70-202ENST00000401730 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
SNRNP70-202ENST00000401730 TNP1P09430 55 aa7.34□□□□□ -1.24
SNRNP70-202ENST00000401730 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
SNRNP70-202ENST00000401730 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
SNRNP70-202ENST00000401730 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
SNRNP70-202ENST00000401730 MT1HP80294 61 aa7.17□□□□□ -1.26
SNRNP70-202ENST00000401730 MT1FP04733 61 aa7.14□□□□□ -1.27
SNRNP70-202ENST00000401730 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
SNRNP70-202ENST00000401730 MT2AP02795 61 aa7.08□□□□□ -1.28
SNRNP70-202ENST00000401730 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
SNRNP70-202ENST00000401730 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
SNRNP70-202ENST00000401730 USH2AO75445 5202 aa6.94□□□□□ -1.3
SNRNP70-202ENST00000401730 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
SNRNP70-202ENST00000401730 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
SNRNP70-202ENST00000401730 MT1BP07438 61 aa6.82□□□□□ -1.32
SNRNP70-202ENST00000401730 KMT2DO14686 5537 aa6.82□□□□□ -1.32
SNRNP70-202ENST00000401730 KRTAP10-5P60370 271 aa6.79□□□□□ -1.32
SNRNP70-202ENST00000401730 MT1XP80297 61 aa6.79□□□□□ -1.32
SNRNP70-202ENST00000401730 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
SNRNP70-202ENST00000401730 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
SNRNP70-202ENST00000401730 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
SNRNP70-202ENST00000401730 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
SNRNP70-202ENST00000401730 KRTAP12-3P60328 96 aa6.65□□□□□ -1.35
SNRNP70-202ENST00000401730 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
SNRNP70-202ENST00000401730 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
SNRNP70-202ENST00000401730 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
SNRNP70-202ENST00000401730 LCE2BO14633 110 aa6.51□□□□□ -1.37
SNRNP70-202ENST00000401730 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
SNRNP70-202ENST00000401730 INE1O15225 51 aa6.45□□□□□ -1.38
SNRNP70-202ENST00000401730 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
SNRNP70-202ENST00000401730 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
SNRNP70-202ENST00000401730 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
SNRNP70-202ENST00000401730 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
SNRNP70-202ENST00000401730 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
SNRNP70-202ENST00000401730 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
SNRNP70-202ENST00000401730 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
SNRNP70-202ENST00000401730 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
SNRNP70-202ENST00000401730 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
SNRNP70-202ENST00000401730 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
SNRNP70-202ENST00000401730 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
SNRNP70-202ENST00000401730 MT1LQ93083 61 aa5.85□□□□□ -1.47
SNRNP70-202ENST00000401730 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
SNRNP70-202ENST00000401730 MT1EP04732 61 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms