RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 LCA10Q71F78 164 aa9.55□□□□□ -0.88
AC008060.1-201ENST00000401499 CHKB-CPT1BH3BT56 60 aa9.54□□□□□ -0.88
AC008060.1-201ENST00000401499 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
AC008060.1-201ENST00000401499 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
AC008060.1-201ENST00000401499 RPS28P62857 69 aaKnown RBP9.5□□□□□ -0.89
AC008060.1-201ENST00000401499 MT1HP80294 61 aa9.4□□□□□ -0.9
AC008060.1-201ENST00000401499 SPTSSBQ8NFR3 76 aa9.37□□□□□ -0.91
AC008060.1-201ENST00000401499 CSAG1Q6PB30 78 aa9.33□□□□□ -0.92
AC008060.1-201ENST00000401499 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
AC008060.1-201ENST00000401499 M0R2T5 61 aa9.23□□□□□ -0.93
AC008060.1-201ENST00000401499 LINC01558Q9Y6Z2 57 aa9.21□□□□□ -0.93
AC008060.1-201ENST00000401499 Q1T7F1 81 aa9.2□□□□□ -0.94
AC008060.1-201ENST00000401499 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
AC008060.1-201ENST00000401499 H0YAA0 97 aa9.14□□□□□ -0.95
AC008060.1-201ENST00000401499 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
AC008060.1-201ENST00000401499 V9GYY9 64 aa9.14□□□□□ -0.95
AC008060.1-201ENST00000401499 A0A1B0GU69 56 aa9.12□□□□□ -0.95
AC008060.1-201ENST00000401499 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
AC008060.1-201ENST00000401499 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
AC008060.1-201ENST00000401499 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
AC008060.1-201ENST00000401499 P0C880 135 aa9.07□□□□□ -0.96
AC008060.1-201ENST00000401499 SEC61GP60059 68 aa9.07□□□□□ -0.96
AC008060.1-201ENST00000401499 PSPHP1O15172 72 aa9.07□□□□□ -0.96
AC008060.1-201ENST00000401499 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
AC008060.1-201ENST00000401499 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
AC008060.1-201ENST00000401499 Q5VV11 94 aa9□□□□□ -0.97
AC008060.1-201ENST00000401499 MT2AP02795 61 aa8.99□□□□□ -0.97
AC008060.1-201ENST00000401499 MT1FP04733 61 aa8.94□□□□□ -0.98
AC008060.1-201ENST00000401499 A0A1B0GU33 70 aa8.9□□□□□ -0.99
AC008060.1-201ENST00000401499 KRTAP10-10P60014 251 aa8.86□□□□□ -0.99
AC008060.1-201ENST00000401499 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
AC008060.1-201ENST00000401499 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
AC008060.1-201ENST00000401499 UQCR11O14957 56 aa8.79□□□□□ -1
AC008060.1-201ENST00000401499 R4GN34 69 aa8.78□□□□□ -1
AC008060.1-201ENST00000401499 M0QZ58 72 aa8.78□□□□□ -1
AC008060.1-201ENST00000401499 CRIPTQ9P021 101 aa8.78□□□□□ -1
AC008060.1-201ENST00000401499 A6NED7 52 aa8.77□□□□□ -1.01
AC008060.1-201ENST00000401499 KRTAP19-1Q8IUB9 90 aa8.71□□□□□ -1.02
AC008060.1-201ENST00000401499 KRTAP9-3Q9BYQ3 159 aa8.7□□□□□ -1.02
AC008060.1-201ENST00000401499 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
AC008060.1-201ENST00000401499 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
AC008060.1-201ENST00000401499 A8MU10 97 aa8.66□□□□□ -1.02
AC008060.1-201ENST00000401499 A0A0D9SG42 100 aa8.62□□□□□ -1.03
AC008060.1-201ENST00000401499 LINC01554Q52M75 96 aa8.62□□□□□ -1.03
AC008060.1-201ENST00000401499 CDC42SE1Q9NRR8 79 aa8.6□□□□□ -1.03
AC008060.1-201ENST00000401499 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
AC008060.1-201ENST00000401499 LCE2BO14633 110 aa8.51□□□□□ -1.05
AC008060.1-201ENST00000401499 KRTAP19-8Q3LI54 63 aa8.5□□□□□ -1.05
AC008060.1-201ENST00000401499 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
AC008060.1-201ENST00000401499 A6NN06 94 aa8.46□□□□□ -1.06
AC008060.1-201ENST00000401499 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
AC008060.1-201ENST00000401499 MT1BP07438 61 aa8.43□□□□□ -1.06
AC008060.1-201ENST00000401499 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
AC008060.1-201ENST00000401499 USH2AO75445 5202 aa8.39□□□□□ -1.07
AC008060.1-201ENST00000401499 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
AC008060.1-201ENST00000401499 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
AC008060.1-201ENST00000401499 K7ERS5 55 aa8.27□□□□□ -1.09
AC008060.1-201ENST00000401499 SVIPQ8NHG7 77 aa8.24□□□□□ -1.09
AC008060.1-201ENST00000401499 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
AC008060.1-201ENST00000401499 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
AC008060.1-201ENST00000401499 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
AC008060.1-201ENST00000401499 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
AC008060.1-201ENST00000401499 SSPOA2VEC9 5147 aa8.15□□□□□ -1.11
AC008060.1-201ENST00000401499 MT1XP80297 61 aa8.1□□□□□ -1.11
AC008060.1-201ENST00000401499 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
AC008060.1-201ENST00000401499 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
AC008060.1-201ENST00000401499 C10orf95Q9H7T3 257 aa8.04□□□□□ -1.12
AC008060.1-201ENST00000401499 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
AC008060.1-201ENST00000401499 ROMO1P60602 79 aa7.96□□□□□ -1.14
AC008060.1-201ENST00000401499 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.14
AC008060.1-201ENST00000401499 CRCT1Q9UGL9 99 aa7.82□□□□□ -1.16
AC008060.1-201ENST00000401499 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
AC008060.1-201ENST00000401499 KRTAP10-7P60409 375 aaPredicted RBP7.78□□□□□ -1.16
AC008060.1-201ENST00000401499 TNP1P09430 55 aa7.76□□□□□ -1.17
AC008060.1-201ENST00000401499 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
AC008060.1-201ENST00000401499 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
AC008060.1-201ENST00000401499 KTN1-AS1Q86SY8 53 aa7.67□□□□□ -1.18
AC008060.1-201ENST00000401499 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
AC008060.1-201ENST00000401499 KMT2DO14686 5537 aa7.57□□□□□ -1.2
AC008060.1-201ENST00000401499 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
AC008060.1-201ENST00000401499 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
AC008060.1-201ENST00000401499 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
AC008060.1-201ENST00000401499 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.21
AC008060.1-201ENST00000401499 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
AC008060.1-201ENST00000401499 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
AC008060.1-201ENST00000401499 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
AC008060.1-201ENST00000401499 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
AC008060.1-201ENST00000401499 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
AC008060.1-201ENST00000401499 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
AC008060.1-201ENST00000401499 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
AC008060.1-201ENST00000401499 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
AC008060.1-201ENST00000401499 H3BS24 57 aa7.22□□□□□ -1.25
AC008060.1-201ENST00000401499 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
AC008060.1-201ENST00000401499 MT1EP04732 61 aa7.12□□□□□ -1.27
AC008060.1-201ENST00000401499 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
AC008060.1-201ENST00000401499 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
AC008060.1-201ENST00000401499 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
AC008060.1-201ENST00000401499 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
AC008060.1-201ENST00000401499 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
AC008060.1-201ENST00000401499 MT1LQ93083 61 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms