RNA–Protein interactions for RNA: ENST00000401498.6

PKDCC-202, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 5

Gene PKDCC, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-202ENST00000401498 CYSTM1Q9H1C7 97 aa14.26□□□□□ -0.13
PKDCC-202ENST00000401498 CCDC179H3BU77 68 aa14.25□□□□□ -0.13
PKDCC-202ENST00000401498 KRTAP10-10P60014 251 aa14.25□□□□□ -0.13
PKDCC-202ENST00000401498 A8MUN3 132 aa14.23□□□□□ -0.13
PKDCC-202ENST00000401498 KRTAP3-3Q9BYR6 98 aa14.2□□□□□ -0.14
PKDCC-202ENST00000401498 DMAC1Q96GE9 116 aa14.19□□□□□ -0.14
PKDCC-202ENST00000401498 CSAG1Q6PB30 78 aa14.18□□□□□ -0.14
PKDCC-202ENST00000401498 NDUFC1O43677 76 aa14.16□□□□□ -0.14
PKDCC-202ENST00000401498 SPANXA2-OT1Q8N9U9 137 aa14.15□□□□□ -0.14
PKDCC-202ENST00000401498 H7BZZ5 65 aa14.14□□□□□ -0.15
PKDCC-202ENST00000401498 KRTAP9-3Q9BYQ3 159 aa14.11□□□□□ -0.15
PKDCC-202ENST00000401498 FSIP2Q5CZC0 6907 aa14.07□□□□□ -0.16
PKDCC-202ENST00000401498 ACYP2P14621 99 aa13.96□□□□□ -0.17
PKDCC-202ENST00000401498 USH2AO75445 5202 aa13.91□□□□□ -0.18
PKDCC-202ENST00000401498 LCE2BO14633 110 aa13.91□□□□□ -0.18
PKDCC-202ENST00000401498 CRCT1Q9UGL9 99 aa13.84□□□□□ -0.19
PKDCC-202ENST00000401498 KRTAP9-6A0A140TA67 174 aa13.83□□□□□ -0.19
PKDCC-202ENST00000401498 PCP4P48539 62 aa13.81□□□□□ -0.2
PKDCC-202ENST00000401498 TMEM258P61165 79 aa13.74□□□□□ -0.21
PKDCC-202ENST00000401498 H0YAA0 97 aa13.72□□□□□ -0.21
PKDCC-202ENST00000401498 ATP5EP56381 51 aaPredicted RBP13.72□□□□□ -0.21
PKDCC-202ENST00000401498 COA5Q86WW8 74 aa13.71□□□□□ -0.21
PKDCC-202ENST00000401498 CHKB-CPT1BH3BT56 60 aa13.71□□□□□ -0.22
PKDCC-202ENST00000401498 KRTAP19-1Q8IUB9 90 aa13.66□□□□□ -0.22
PKDCC-202ENST00000401498 SSPOA2VEC9 5147 aa13.66□□□□□ -0.22
PKDCC-202ENST00000401498 ADM2Q7Z4H4 148 aa13.61□□□□□ -0.23
PKDCC-202ENST00000401498 SPTSSBQ8NFR3 76 aa13.58□□□□□ -0.23
PKDCC-202ENST00000401498 SPRR2GQ9BYE4 73 aa13.56□□□□□ -0.24
PKDCC-202ENST00000401498 CRIPTQ9P021 101 aa13.52□□□□□ -0.25
PKDCC-202ENST00000401498 P0C880 135 aa13.41□□□□□ -0.26
PKDCC-202ENST00000401498 KRTAP3-2Q9BYR7 98 aa13.41□□□□□ -0.26
PKDCC-202ENST00000401498 KRTAP19-8Q3LI54 63 aa13.38□□□□□ -0.27
PKDCC-202ENST00000401498 MT1BP07438 61 aa13.32□□□□□ -0.28
PKDCC-202ENST00000401498 KRTAP19-6Q3LI70 58 aa13.3□□□□□ -0.28
PKDCC-202ENST00000401498 Q5VV11 94 aa13.29□□□□□ -0.28
PKDCC-202ENST00000401498 SERP1Q9Y6X1 66 aa13.29□□□□□ -0.28
PKDCC-202ENST00000401498 FCGBPQ9Y6R7 5405 aaPredicted RBP13.25□□□□□ -0.29
PKDCC-202ENST00000401498 R4GN34 69 aa13.2□□□□□ -0.3
PKDCC-202ENST00000401498 M0QZ58 72 aa13.12□□□□□ -0.31
PKDCC-202ENST00000401498 SEC61GP60059 68 aa13.03□□□□□ -0.32
PKDCC-202ENST00000401498 LINC01558Q9Y6Z2 57 aa12.96□□□□□ -0.33
PKDCC-202ENST00000401498 A0A1B0GU69 56 aa12.95□□□□□ -0.34
PKDCC-202ENST00000401498 RPS28P62857 69 aaKnown RBP12.94□□□□□ -0.34
PKDCC-202ENST00000401498 LINC01554Q52M75 96 aa12.9□□□□□ -0.34
PKDCC-202ENST00000401498 A6NN06 94 aa12.89□□□□□ -0.35
PKDCC-202ENST00000401498 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.86□□□□□ -0.35
PKDCC-202ENST00000401498 KRTAP10-5P60370 271 aa12.86□□□□□ -0.35
PKDCC-202ENST00000401498 SMIM26A0A096LP01 95 aa12.83□□□□□ -0.36
PKDCC-202ENST00000401498 PLAC4Q8WY50 150 aa12.82□□□□□ -0.36
PKDCC-202ENST00000401498 KRTAP13-4Q3LI77 160 aa12.81□□□□□ -0.36
PKDCC-202ENST00000401498 PRR15LQ9BU68 103 aa12.81□□□□□ -0.36
PKDCC-202ENST00000401498 A0A1B0GU33 70 aa12.77□□□□□ -0.36
PKDCC-202ENST00000401498 Q1T7F1 81 aa12.77□□□□□ -0.37
PKDCC-202ENST00000401498 V9GYY9 64 aa12.74□□□□□ -0.37
PKDCC-202ENST00000401498 MACF1Q9UPN3 7388 aaKnown RBP12.73□□□□□ -0.37
PKDCC-202ENST00000401498 SPATA8Q6RVD6 105 aa12.65□□□□□ -0.38
PKDCC-202ENST00000401498 MT1XP80297 61 aa12.63□□□□□ -0.39
PKDCC-202ENST00000401498 PSPHP1O15172 72 aa12.58□□□□□ -0.4
PKDCC-202ENST00000401498 PRO2289Q9P1D8 64 aa12.56□□□□□ -0.4
PKDCC-202ENST00000401498 SYNE2Q8WXH0 6885 aaKnown RBP12.52□□□□□ -0.41
PKDCC-202ENST00000401498 KRTAP9-7A8MTY7 169 aa12.52□□□□□ -0.41
PKDCC-202ENST00000401498 A0A0D9SG42 100 aa12.47□□□□□ -0.41
PKDCC-202ENST00000401498 UQCR11O14957 56 aa12.43□□□□□ -0.42
PKDCC-202ENST00000401498 A8MU10 97 aa12.39□□□□□ -0.43
PKDCC-202ENST00000401498 KRTAP12-1P59990 96 aa12.25□□□□□ -0.45
PKDCC-202ENST00000401498 MIR22HGQ0VDD5 57 aa12.25□□□□□ -0.45
PKDCC-202ENST00000401498 KRTAP6-3Q3LI67 103 aa12.22□□□□□ -0.45
PKDCC-202ENST00000401498 CAMK2N1Q7Z7J9 78 aa12.22□□□□□ -0.45
PKDCC-202ENST00000401498 KRTAP12-2P59991 146 aa12.2□□□□□ -0.46
PKDCC-202ENST00000401498 SPINT4Q6UDR6 99 aa12.2□□□□□ -0.46
PKDCC-202ENST00000401498 A6NED7 52 aa12.18□□□□□ -0.46
PKDCC-202ENST00000401498 KMT2DO14686 5537 aa12.14□□□□□ -0.47
PKDCC-202ENST00000401498 KRTAP10-7P60409 375 aaPredicted RBP12.08□□□□□ -0.48
PKDCC-202ENST00000401498 KRTAP10-12P60413 245 aa12□□□□□ -0.49
PKDCC-202ENST00000401498 KRTAP5-9P26371 169 aa11.93□□□□□ -0.5
PKDCC-202ENST00000401498 KRTAP4-8A0A0G2JLE6 195 aa11.92□□□□□ -0.5
PKDCC-202ENST00000401498 KRTAP4-8Q9BYQ9 185 aa11.92□□□□□ -0.5
PKDCC-202ENST00000401498 CDC42SE1Q9NRR8 79 aa11.88□□□□□ -0.51
PKDCC-202ENST00000401498 KRTAP8-1Q8IUC2 63 aa11.85□□□□□ -0.51
PKDCC-202ENST00000401498 MUC12Q9UKN1 5478 aa11.84□□□□□ -0.51
PKDCC-202ENST00000401498 K7ERS5 55 aa11.77□□□□□ -0.53
PKDCC-202ENST00000401498 SPRR2FQ96RM1 72 aa11.71□□□□□ -0.53
PKDCC-202ENST00000401498 C10orf95Q9H7T3 257 aa11.64□□□□□ -0.55
PKDCC-202ENST00000401498 NEBP20929 6669 aa11.63□□□□□ -0.55
PKDCC-202ENST00000401498 MDN1Q9NU22 5596 aa11.62□□□□□ -0.55
PKDCC-202ENST00000401498 BRK1Q8WUW1 75 aa11.54□□□□□ -0.56
PKDCC-202ENST00000401498 TNP1P09430 55 aa11.41□□□□□ -0.58
PKDCC-202ENST00000401498 SPRR2EP22531 72 aa11.39□□□□□ -0.59
PKDCC-202ENST00000401498 SPRR2BP35325 72 aa11.39□□□□□ -0.59
PKDCC-202ENST00000401498 SPRR2AP35326 72 aa11.39□□□□□ -0.59
PKDCC-202ENST00000401498 LCE1AQ5T7P2 110 aa11.35□□□□□ -0.59
PKDCC-202ENST00000401498 KRTAP19-7Q3SYF9 63 aa11.29□□□□□ -0.6
PKDCC-202ENST00000401498 ROMO1P60602 79 aa11.21□□□□□ -0.61
PKDCC-202ENST00000401498 KRTAP25-1Q3LHN0 102 aa11.2□□□□□ -0.62
PKDCC-202ENST00000401498 LCE3AQ5TA76 89 aa11.2□□□□□ -0.62
PKDCC-202ENST00000401498 KRTAP19-5Q3LI72 72 aa11.16□□□□□ -0.62
PKDCC-202ENST00000401498 MT1EP04732 61 aa11.14□□□□□ -0.63
PKDCC-202ENST00000401498 KRTAP20-1Q3LI63 56 aa11.01□□□□□ -0.65
PKDCC-202ENST00000401498 SPRR2DP22532 72 aa10.99□□□□□ -0.65
PKDCC-202ENST00000401498 PRO0628Q9UI54 55 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms