RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
ITSN1-211ENST00000399355 Q5VSD8 79 aa6.23□□□□□ -1.41
ITSN1-211ENST00000399355 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
ITSN1-211ENST00000399355 J3QL48 77 aa6.21□□□□□ -1.42
ITSN1-211ENST00000399355 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
ITSN1-211ENST00000399355 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
ITSN1-211ENST00000399355 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
ITSN1-211ENST00000399355 A8MUU9 505 aa6.15□□□□□ -1.42
ITSN1-211ENST00000399355 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
ITSN1-211ENST00000399355 H0YAA0 97 aa6.15□□□□□ -1.42
ITSN1-211ENST00000399355 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.43
ITSN1-211ENST00000399355 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
ITSN1-211ENST00000399355 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
ITSN1-211ENST00000399355 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
ITSN1-211ENST00000399355 UQCR11O14957 56 aa6.13□□□□□ -1.43
ITSN1-211ENST00000399355 HERC1Q15751 4861 aa6.12□□□□□ -1.43
ITSN1-211ENST00000399355 A0A0D9SG42 100 aa6.09□□□□□ -1.43
ITSN1-211ENST00000399355 HERC2O95714 4834 aa6.08□□□□□ -1.44
ITSN1-211ENST00000399355 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
ITSN1-211ENST00000399355 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
ITSN1-211ENST00000399355 XP32Q5T750 250 aa6.06□□□□□ -1.44
ITSN1-211ENST00000399355 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
ITSN1-211ENST00000399355 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
ITSN1-211ENST00000399355 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
ITSN1-211ENST00000399355 A0A1B0GU33 70 aa6.02□□□□□ -1.45
ITSN1-211ENST00000399355 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
ITSN1-211ENST00000399355 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
ITSN1-211ENST00000399355 P0C880 135 aa6□□□□□ -1.45
ITSN1-211ENST00000399355 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
ITSN1-211ENST00000399355 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
ITSN1-211ENST00000399355 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
ITSN1-211ENST00000399355 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
ITSN1-211ENST00000399355 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
ITSN1-211ENST00000399355 S4R3F8 94 aa5.85□□□□□ -1.47
ITSN1-211ENST00000399355 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
ITSN1-211ENST00000399355 MUC17Q685J3 4493 aa5.84□□□□□ -1.48
ITSN1-211ENST00000399355 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
ITSN1-211ENST00000399355 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
ITSN1-211ENST00000399355 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
ITSN1-211ENST00000399355 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
ITSN1-211ENST00000399355 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
ITSN1-211ENST00000399355 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
ITSN1-211ENST00000399355 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
ITSN1-211ENST00000399355 ROMO1P60602 79 aa5.63□□□□□ -1.51
ITSN1-211ENST00000399355 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
ITSN1-211ENST00000399355 M0QZ58 72 aa5.59□□□□□ -1.51
ITSN1-211ENST00000399355 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.52
ITSN1-211ENST00000399355 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
ITSN1-211ENST00000399355 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
ITSN1-211ENST00000399355 R4GN34 69 aa5.52□□□□□ -1.53
ITSN1-211ENST00000399355 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
ITSN1-211ENST00000399355 USH2AO75445 5202 aa5.46□□□□□ -1.54
ITSN1-211ENST00000399355 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
ITSN1-211ENST00000399355 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
ITSN1-211ENST00000399355 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
ITSN1-211ENST00000399355 LCE2BO14633 110 aa5.37□□□□□ -1.55
ITSN1-211ENST00000399355 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
ITSN1-211ENST00000399355 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
ITSN1-211ENST00000399355 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
ITSN1-211ENST00000399355 KMT2DO14686 5537 aa5.28□□□□□ -1.56
ITSN1-211ENST00000399355 M0R2T5 61 aa5.23□□□□□ -1.57
ITSN1-211ENST00000399355 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
ITSN1-211ENST00000399355 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
ITSN1-211ENST00000399355 MT1HP80294 61 aa5.06□□□□□ -1.6
ITSN1-211ENST00000399355 MT1FP04733 61 aa5.05□□□□□ -1.6
ITSN1-211ENST00000399355 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
ITSN1-211ENST00000399355 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
ITSN1-211ENST00000399355 MT2AP02795 61 aa4.97□□□□□ -1.61
ITSN1-211ENST00000399355 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
ITSN1-211ENST00000399355 TNP1P09430 55 aa4.88□□□□□ -1.63
ITSN1-211ENST00000399355 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
ITSN1-211ENST00000399355 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
ITSN1-211ENST00000399355 MT1BP07438 61 aa4.78□□□□□ -1.64
ITSN1-211ENST00000399355 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
ITSN1-211ENST00000399355 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
ITSN1-211ENST00000399355 MT1XP80297 61 aa4.74□□□□□ -1.65
ITSN1-211ENST00000399355 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
ITSN1-211ENST00000399355 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
ITSN1-211ENST00000399355 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
ITSN1-211ENST00000399355 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
ITSN1-211ENST00000399355 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
ITSN1-211ENST00000399355 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
ITSN1-211ENST00000399355 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
ITSN1-211ENST00000399355 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
ITSN1-211ENST00000399355 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
ITSN1-211ENST00000399355 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
ITSN1-211ENST00000399355 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
ITSN1-211ENST00000399355 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
ITSN1-211ENST00000399355 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
ITSN1-211ENST00000399355 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
ITSN1-211ENST00000399355 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
ITSN1-211ENST00000399355 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.69
ITSN1-211ENST00000399355 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
ITSN1-211ENST00000399355 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.7
ITSN1-211ENST00000399355 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
ITSN1-211ENST00000399355 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
ITSN1-211ENST00000399355 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
ITSN1-211ENST00000399355 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
ITSN1-211ENST00000399355 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
ITSN1-211ENST00000399355 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms