RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 CRIPTQ9P021 101 aa10.15□□□□□ -0.78
COL13A1-205ENST00000398978 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
COL13A1-205ENST00000398978 Q5VSD8 79 aa10.08□□□□□ -0.8
COL13A1-205ENST00000398978 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
COL13A1-205ENST00000398978 LPAP08519 4548 aa10.05□□□□□ -0.8
COL13A1-205ENST00000398978 KRTAP17-1Q9BYP8 105 aa10.05□□□□□ -0.8
COL13A1-205ENST00000398978 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
COL13A1-205ENST00000398978 RYR3Q15413 4870 aa10.04□□□□□ -0.8
COL13A1-205ENST00000398978 A0A0D9SG42 100 aa10.03□□□□□ -0.8
COL13A1-205ENST00000398978 XP32Q5T750 250 aa10.01□□□□□ -0.81
COL13A1-205ENST00000398978 KRTAP13-4Q3LI77 160 aa10□□□□□ -0.81
COL13A1-205ENST00000398978 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
COL13A1-205ENST00000398978 KIAA1109Q2LD37 5005 aa9.99□□□□□ -0.81
COL13A1-205ENST00000398978 KRTAP10-6P60371 365 aaPredicted RBP9.98□□□□□ -0.81
COL13A1-205ENST00000398978 RYR1P21817 5038 aa9.96□□□□□ -0.82
COL13A1-205ENST00000398978 KRTAP25-1Q3LHN0 102 aa9.94□□□□□ -0.82
COL13A1-205ENST00000398978 LRP2P98164 4655 aa9.92□□□□□ -0.82
COL13A1-205ENST00000398978 S4R3F8 94 aa9.91□□□□□ -0.82
COL13A1-205ENST00000398978 K7ERS5 55 aa9.91□□□□□ -0.82
COL13A1-205ENST00000398978 KRTAP3-2Q9BYR7 98 aa9.9□□□□□ -0.82
COL13A1-205ENST00000398978 P0C880 135 aa9.89□□□□□ -0.83
COL13A1-205ENST00000398978 ROMO1P60602 79 aa9.88□□□□□ -0.83
COL13A1-205ENST00000398978 MT1HL1P0DM35 61 aa9.77□□□□□ -0.84
COL13A1-205ENST00000398978 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.86
COL13A1-205ENST00000398978 EPPK1P58107 5090 aaKnown RBP9.7□□□□□ -0.86
COL13A1-205ENST00000398978 A0A0A0MQY5 61 aa9.68□□□□□ -0.86
COL13A1-205ENST00000398978 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
COL13A1-205ENST00000398978 KRTAP12-2P59991 146 aa9.66□□□□□ -0.86
COL13A1-205ENST00000398978 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
COL13A1-205ENST00000398978 TPRXLQ17RH7 258 aa9.62□□□□□ -0.87
COL13A1-205ENST00000398978 NDUFAF8A1L188 74 aa9.53□□□□□ -0.88
COL13A1-205ENST00000398978 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
COL13A1-205ENST00000398978 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
COL13A1-205ENST00000398978 M0QZ58 72 aa9.34□□□□□ -0.91
COL13A1-205ENST00000398978 MUC17Q685J3 4493 aa9.29□□□□□ -0.92
COL13A1-205ENST00000398978 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
COL13A1-205ENST00000398978 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
COL13A1-205ENST00000398978 R4GN34 69 aa9.25□□□□□ -0.93
COL13A1-205ENST00000398978 MUC2Q02817 5179 aa9.24□□□□□ -0.93
COL13A1-205ENST00000398978 HERC2O95714 4834 aa9.15□□□□□ -0.95
COL13A1-205ENST00000398978 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
COL13A1-205ENST00000398978 J3QL48 77 aa9.08□□□□□ -0.96
COL13A1-205ENST00000398978 KRTAP15-1Q3LI76 137 aa9.08□□□□□ -0.96
COL13A1-205ENST00000398978 LUZP6Q538Z0 58 aa8.95□□□□□ -0.98
COL13A1-205ENST00000398978 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
COL13A1-205ENST00000398978 HERC1Q15751 4861 aa8.84□□□□□ -0.99
COL13A1-205ENST00000398978 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
COL13A1-205ENST00000398978 PCLOQ9Y6V0 5065 aa8.81□□□□□ -1
COL13A1-205ENST00000398978 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
COL13A1-205ENST00000398978 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
COL13A1-205ENST00000398978 BIRC6Q9NR09 4857 aa8.72□□□□□ -1.01
COL13A1-205ENST00000398978 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
COL13A1-205ENST00000398978 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
COL13A1-205ENST00000398978 RNF213Q63HN8 5207 aa8.52□□□□□ -1.05
COL13A1-205ENST00000398978 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
COL13A1-205ENST00000398978 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
COL13A1-205ENST00000398978 TNP1P09430 55 aa8.39□□□□□ -1.07
COL13A1-205ENST00000398978 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
COL13A1-205ENST00000398978 M0R2T5 61 aa8.37□□□□□ -1.07
COL13A1-205ENST00000398978 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
COL13A1-205ENST00000398978 SPRR2GQ9BYE4 73 aa8.19□□□□□ -1.1
COL13A1-205ENST00000398978 MT1HP80294 61 aa8.18□□□□□ -1.1
COL13A1-205ENST00000398978 KRTAP10-10P60014 251 aa8.15□□□□□ -1.11
COL13A1-205ENST00000398978 MT1FP04733 61 aa8.14□□□□□ -1.11
COL13A1-205ENST00000398978 MT2AP02795 61 aa8.08□□□□□ -1.12
COL13A1-205ENST00000398978 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
COL13A1-205ENST00000398978 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
COL13A1-205ENST00000398978 KRTAP9-8Q9BYQ0 159 aa7.99□□□□□ -1.13
COL13A1-205ENST00000398978 SPRR5A0A1B0GTR4 108 aa7.92□□□□□ -1.14
COL13A1-205ENST00000398978 MT1BP07438 61 aa7.83□□□□□ -1.16
COL13A1-205ENST00000398978 KRTAP10-5P60370 271 aa7.8□□□□□ -1.16
COL13A1-205ENST00000398978 MT1XP80297 61 aa7.8□□□□□ -1.16
COL13A1-205ENST00000398978 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
COL13A1-205ENST00000398978 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
COL13A1-205ENST00000398978 USH2AO75445 5202 aa7.68□□□□□ -1.18
COL13A1-205ENST00000398978 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
COL13A1-205ENST00000398978 KRTAP10-12P60413 245 aa7.65□□□□□ -1.18
COL13A1-205ENST00000398978 KRTAP9-3Q9BYQ3 159 aa7.63□□□□□ -1.19
COL13A1-205ENST00000398978 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
COL13A1-205ENST00000398978 KMT2DO14686 5537 aa7.61□□□□□ -1.19
COL13A1-205ENST00000398978 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
COL13A1-205ENST00000398978 LCE2BO14633 110 aa7.41□□□□□ -1.22
COL13A1-205ENST00000398978 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
COL13A1-205ENST00000398978 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
COL13A1-205ENST00000398978 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
COL13A1-205ENST00000398978 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
COL13A1-205ENST00000398978 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
COL13A1-205ENST00000398978 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
COL13A1-205ENST00000398978 INE1O15225 51 aa7.04□□□□□ -1.28
COL13A1-205ENST00000398978 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
COL13A1-205ENST00000398978 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
COL13A1-205ENST00000398978 KRTAP19-7Q3SYF9 63 aa6.94□□□□□ -1.3
COL13A1-205ENST00000398978 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
COL13A1-205ENST00000398978 MT1LQ93083 61 aa6.73□□□□□ -1.33
COL13A1-205ENST00000398978 MT1EP04732 61 aa6.71□□□□□ -1.34
COL13A1-205ENST00000398978 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
COL13A1-205ENST00000398978 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
COL13A1-205ENST00000398978 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
COL13A1-205ENST00000398978 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
COL13A1-205ENST00000398978 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms