RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
CCNF-202ENST00000397066 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
CCNF-202ENST00000397066 P0C880 135 aa7.51□□□□□ -1.21
CCNF-202ENST00000397066 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
CCNF-202ENST00000397066 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
CCNF-202ENST00000397066 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
CCNF-202ENST00000397066 XP32Q5T750 250 aa7.49□□□□□ -1.21
CCNF-202ENST00000397066 Q5VSD8 79 aa7.47□□□□□ -1.21
CCNF-202ENST00000397066 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
CCNF-202ENST00000397066 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
CCNF-202ENST00000397066 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
CCNF-202ENST00000397066 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
CCNF-202ENST00000397066 PKHD1L1Q86WI1 4243 aa7.36□□□□□ -1.23
CCNF-202ENST00000397066 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
CCNF-202ENST00000397066 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
CCNF-202ENST00000397066 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
CCNF-202ENST00000397066 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
CCNF-202ENST00000397066 M0QZ58 72 aa7.27□□□□□ -1.25
CCNF-202ENST00000397066 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
CCNF-202ENST00000397066 HSPG2P98160 4391 aa7.22□□□□□ -1.25
CCNF-202ENST00000397066 R4GN34 69 aa7.22□□□□□ -1.25
CCNF-202ENST00000397066 RYR2Q92736 4967 aa7.13□□□□□ -1.27
CCNF-202ENST00000397066 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
CCNF-202ENST00000397066 TNXBP22105 4242 aa7.11□□□□□ -1.27
CCNF-202ENST00000397066 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
CCNF-202ENST00000397066 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
CCNF-202ENST00000397066 J3QL48 77 aa7.04□□□□□ -1.28
CCNF-202ENST00000397066 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
CCNF-202ENST00000397066 KRTAP17-1Q9BYP8 105 aa6.97□□□□□ -1.29
CCNF-202ENST00000397066 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
CCNF-202ENST00000397066 LRP2P98164 4655 aa6.95□□□□□ -1.3
CCNF-202ENST00000397066 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
CCNF-202ENST00000397066 LPAP08519 4548 aa6.92□□□□□ -1.3
CCNF-202ENST00000397066 RYR1P21817 5038 aa6.91□□□□□ -1.3
CCNF-202ENST00000397066 KIAA1109Q2LD37 5005 aa6.91□□□□□ -1.3
CCNF-202ENST00000397066 RYR3Q15413 4870 aa6.9□□□□□ -1.31
CCNF-202ENST00000397066 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
CCNF-202ENST00000397066 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
CCNF-202ENST00000397066 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
CCNF-202ENST00000397066 KRTAP4-5Q9BYR2 181 aa6.72□□□□□ -1.33
CCNF-202ENST00000397066 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
CCNF-202ENST00000397066 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
CCNF-202ENST00000397066 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
CCNF-202ENST00000397066 TNP1P09430 55 aa6.6□□□□□ -1.35
CCNF-202ENST00000397066 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
CCNF-202ENST00000397066 BIRC6Q9NR09 4857 aa6.5□□□□□ -1.37
CCNF-202ENST00000397066 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
CCNF-202ENST00000397066 M0R2T5 61 aa6.43□□□□□ -1.38
CCNF-202ENST00000397066 HERC2O95714 4834 aa6.41□□□□□ -1.38
CCNF-202ENST00000397066 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
CCNF-202ENST00000397066 MUC2Q02817 5179 aa6.33□□□□□ -1.4
CCNF-202ENST00000397066 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CCNF-202ENST00000397066 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
CCNF-202ENST00000397066 KRTAP10-10P60014 251 aa6.15□□□□□ -1.42
CCNF-202ENST00000397066 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
CCNF-202ENST00000397066 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
CCNF-202ENST00000397066 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
CCNF-202ENST00000397066 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
CCNF-202ENST00000397066 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
CCNF-202ENST00000397066 HERC1Q15751 4861 aa6.05□□□□□ -1.44
CCNF-202ENST00000397066 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
CCNF-202ENST00000397066 LCE2CQ5TA81 110 aa6□□□□□ -1.45
CCNF-202ENST00000397066 MT1HP80294 61 aa5.94□□□□□ -1.46
CCNF-202ENST00000397066 MT1FP04733 61 aa5.92□□□□□ -1.46
CCNF-202ENST00000397066 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
CCNF-202ENST00000397066 MT2AP02795 61 aa5.91□□□□□ -1.46
CCNF-202ENST00000397066 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
CCNF-202ENST00000397066 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
CCNF-202ENST00000397066 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.48
CCNF-202ENST00000397066 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
CCNF-202ENST00000397066 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
CCNF-202ENST00000397066 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
CCNF-202ENST00000397066 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
CCNF-202ENST00000397066 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
CCNF-202ENST00000397066 MT1XP80297 61 aa5.74□□□□□ -1.49
CCNF-202ENST00000397066 INE1O15225 51 aa5.73□□□□□ -1.49
CCNF-202ENST00000397066 MT1BP07438 61 aa5.71□□□□□ -1.5
CCNF-202ENST00000397066 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
CCNF-202ENST00000397066 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
CCNF-202ENST00000397066 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
CCNF-202ENST00000397066 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
CCNF-202ENST00000397066 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
CCNF-202ENST00000397066 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
CCNF-202ENST00000397066 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
CCNF-202ENST00000397066 LCE2BO14633 110 aa5.29□□□□□ -1.56
CCNF-202ENST00000397066 KMT2DO14686 5537 aa5.28□□□□□ -1.56
CCNF-202ENST00000397066 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
CCNF-202ENST00000397066 USH2AO75445 5202 aa5.25□□□□□ -1.57
CCNF-202ENST00000397066 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
CCNF-202ENST00000397066 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
CCNF-202ENST00000397066 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
CCNF-202ENST00000397066 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
CCNF-202ENST00000397066 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
CCNF-202ENST00000397066 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
CCNF-202ENST00000397066 MT1LQ93083 61 aa4.99□□□□□ -1.61
CCNF-202ENST00000397066 MT1EP04732 61 aa4.95□□□□□ -1.62
CCNF-202ENST00000397066 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
CCNF-202ENST00000397066 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
CCNF-202ENST00000397066 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
CCNF-202ENST00000397066 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms