RNA–Protein interactions for RNA: ENST00000397011.2

EIF3B-202, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 2,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-202ENST00000397011 LPAP08519 4548 aa9.99□□□□□ -0.81
EIF3B-202ENST00000397011 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
EIF3B-202ENST00000397011 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
EIF3B-202ENST00000397011 Q5VSD8 79 aa9.96□□□□□ -0.82
EIF3B-202ENST00000397011 KRTAP10-8P60410 259 aa9.93□□□□□ -0.82
EIF3B-202ENST00000397011 A0A0D9SG42 100 aa9.9□□□□□ -0.82
EIF3B-202ENST00000397011 KRTAP17-1Q9BYP8 105 aa9.89□□□□□ -0.83
EIF3B-202ENST00000397011 RYR1P21817 5038 aa9.88□□□□□ -0.83
EIF3B-202ENST00000397011 LRP2P98164 4655 aa9.87□□□□□ -0.83
EIF3B-202ENST00000397011 H3BS24 57 aa9.84□□□□□ -0.83
EIF3B-202ENST00000397011 KRTAP21-3Q3LHN1 58 aa9.83□□□□□ -0.84
EIF3B-202ENST00000397011 XP32Q5T750 250 aa9.82□□□□□ -0.84
EIF3B-202ENST00000397011 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
EIF3B-202ENST00000397011 RPL37P61927 97 aaKnown RBP9.77□□□□□ -0.85
EIF3B-202ENST00000397011 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.85
EIF3B-202ENST00000397011 ABCA13Q86UQ4 5058 aa9.75□□□□□ -0.85
EIF3B-202ENST00000397011 EPPK1P58107 5090 aaKnown RBP9.75□□□□□ -0.85
EIF3B-202ENST00000397011 KRTAP10-6P60371 365 aaPredicted RBP9.72□□□□□ -0.85
EIF3B-202ENST00000397011 S4R3F8 94 aa9.71□□□□□ -0.86
EIF3B-202ENST00000397011 P0C880 135 aa9.7□□□□□ -0.86
EIF3B-202ENST00000397011 K7ERS5 55 aa9.69□□□□□ -0.86
EIF3B-202ENST00000397011 KRTAP25-1Q3LHN0 102 aa9.64□□□□□ -0.87
EIF3B-202ENST00000397011 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
EIF3B-202ENST00000397011 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
EIF3B-202ENST00000397011 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
EIF3B-202ENST00000397011 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
EIF3B-202ENST00000397011 ROMO1P60602 79 aa9.48□□□□□ -0.89
EIF3B-202ENST00000397011 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
EIF3B-202ENST00000397011 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
EIF3B-202ENST00000397011 MUC2Q02817 5179 aa9.4□□□□□ -0.9
EIF3B-202ENST00000397011 TPRXLQ17RH7 258 aa9.36□□□□□ -0.91
EIF3B-202ENST00000397011 KRTAP12-1P59990 96 aa9.27□□□□□ -0.93
EIF3B-202ENST00000397011 HERC2O95714 4834 aa9.19□□□□□ -0.94
EIF3B-202ENST00000397011 M0QZ58 72 aa9.19□□□□□ -0.94
EIF3B-202ENST00000397011 R4GN34 69 aa9.12□□□□□ -0.95
EIF3B-202ENST00000397011 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
EIF3B-202ENST00000397011 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.95
EIF3B-202ENST00000397011 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
EIF3B-202ENST00000397011 J3QL48 77 aa9.04□□□□□ -0.96
EIF3B-202ENST00000397011 HERC1Q15751 4861 aa8.98□□□□□ -0.97
EIF3B-202ENST00000397011 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
EIF3B-202ENST00000397011 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
EIF3B-202ENST00000397011 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
EIF3B-202ENST00000397011 PCLOQ9Y6V0 5065 aa8.82□□□□□ -1
EIF3B-202ENST00000397011 KRTAP15-1Q3LI76 137 aa8.77□□□□□ -1.01
EIF3B-202ENST00000397011 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
EIF3B-202ENST00000397011 CAMK2N1Q7Z7J9 78 aa8.72□□□□□ -1.01
EIF3B-202ENST00000397011 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
EIF3B-202ENST00000397011 FLGP20930 4061 aaPredicted RBP8.64□□□□□ -1.03
EIF3B-202ENST00000397011 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
EIF3B-202ENST00000397011 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
EIF3B-202ENST00000397011 UBR4Q5T4S7 5183 aa8.54□□□□□ -1.04
EIF3B-202ENST00000397011 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
EIF3B-202ENST00000397011 M0R2T5 61 aa8.36□□□□□ -1.07
EIF3B-202ENST00000397011 TNP1P09430 55 aa8.22□□□□□ -1.09
EIF3B-202ENST00000397011 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
EIF3B-202ENST00000397011 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
EIF3B-202ENST00000397011 LUZP6Q538Z0 58 aa8.09□□□□□ -1.11
EIF3B-202ENST00000397011 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
EIF3B-202ENST00000397011 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
EIF3B-202ENST00000397011 MT1HP80294 61 aa8.04□□□□□ -1.12
EIF3B-202ENST00000397011 A0A0A0MQY5 61 aa8.01□□□□□ -1.13
EIF3B-202ENST00000397011 MT1FP04733 61 aa7.99□□□□□ -1.13
EIF3B-202ENST00000397011 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
EIF3B-202ENST00000397011 MT2AP02795 61 aa7.93□□□□□ -1.14
EIF3B-202ENST00000397011 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
EIF3B-202ENST00000397011 USH2AO75445 5202 aa7.87□□□□□ -1.15
EIF3B-202ENST00000397011 KRTAP9-8Q9BYQ0 159 aa7.83□□□□□ -1.16
EIF3B-202ENST00000397011 KMT2DO14686 5537 aa7.72□□□□□ -1.17
EIF3B-202ENST00000397011 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
EIF3B-202ENST00000397011 MT1BP07438 61 aa7.65□□□□□ -1.18
EIF3B-202ENST00000397011 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
EIF3B-202ENST00000397011 MT1XP80297 61 aa7.62□□□□□ -1.19
EIF3B-202ENST00000397011 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
EIF3B-202ENST00000397011 KRTAP19-8Q3LI54 63 aa7.55□□□□□ -1.2
EIF3B-202ENST00000397011 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
EIF3B-202ENST00000397011 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
EIF3B-202ENST00000397011 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
EIF3B-202ENST00000397011 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
EIF3B-202ENST00000397011 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
EIF3B-202ENST00000397011 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
EIF3B-202ENST00000397011 LCE2BO14633 110 aa7.29□□□□□ -1.24
EIF3B-202ENST00000397011 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
EIF3B-202ENST00000397011 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.25
EIF3B-202ENST00000397011 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.25
EIF3B-202ENST00000397011 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
EIF3B-202ENST00000397011 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
EIF3B-202ENST00000397011 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
EIF3B-202ENST00000397011 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
EIF3B-202ENST00000397011 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
EIF3B-202ENST00000397011 KRTAP9-6A8MVA2 160 aa6.87□□□□□ -1.31
EIF3B-202ENST00000397011 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
EIF3B-202ENST00000397011 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
EIF3B-202ENST00000397011 INE1O15225 51 aa6.77□□□□□ -1.33
EIF3B-202ENST00000397011 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
EIF3B-202ENST00000397011 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
EIF3B-202ENST00000397011 MT1LQ93083 61 aa6.56□□□□□ -1.36
EIF3B-202ENST00000397011 MT1EP04732 61 aa6.55□□□□□ -1.36
EIF3B-202ENST00000397011 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
EIF3B-202ENST00000397011 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms