RNA–Protein interactions for RNA: ENST00000396641.6

LRRC3B-201, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-201ENST00000396641 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
LRRC3B-201ENST00000396641 FAT4Q6V0I7 4981 aa10.34□□□□□ -0.75
LRRC3B-201ENST00000396641 COA5Q86WW8 74 aa10.34□□□□□ -0.75
LRRC3B-201ENST00000396641 LCA10Q71F78 164 aa10.33□□□□□ -0.76
LRRC3B-201ENST00000396641 FLGP20930 4061 aaPredicted RBP10.32□□□□□ -0.76
LRRC3B-201ENST00000396641 CHKB-CPT1BH3BT56 60 aa10.31□□□□□ -0.76
LRRC3B-201ENST00000396641 MT1HP80294 61 aa10.28□□□□□ -0.76
LRRC3B-201ENST00000396641 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
LRRC3B-201ENST00000396641 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
LRRC3B-201ENST00000396641 CSAG1Q6PB30 78 aa10.22□□□□□ -0.77
LRRC3B-201ENST00000396641 M0R2T5 61 aa10.18□□□□□ -0.78
LRRC3B-201ENST00000396641 LCE2AQ5TA79 106 aaPredicted RBP10.12□□□□□ -0.79
LRRC3B-201ENST00000396641 SMIM26A0A096LP01 95 aa10.02□□□□□ -0.81
LRRC3B-201ENST00000396641 H0YAA0 97 aa9.99□□□□□ -0.81
LRRC3B-201ENST00000396641 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.82
LRRC3B-201ENST00000396641 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
LRRC3B-201ENST00000396641 SVIPQ8NHG7 77 aa9.89□□□□□ -0.83
LRRC3B-201ENST00000396641 SEC61GP60059 68 aa9.87□□□□□ -0.83
LRRC3B-201ENST00000396641 ADM2Q7Z4H4 148 aa9.87□□□□□ -0.83
LRRC3B-201ENST00000396641 LINC01558Q9Y6Z2 57 aa9.87□□□□□ -0.83
LRRC3B-201ENST00000396641 KRTAP9-8Q9BYQ0 159 aa9.87□□□□□ -0.83
LRRC3B-201ENST00000396641 V9GYY9 64 aa9.85□□□□□ -0.83
LRRC3B-201ENST00000396641 Q1T7F1 81 aa9.83□□□□□ -0.84
LRRC3B-201ENST00000396641 A0A1B0GU69 56 aa9.81□□□□□ -0.84
LRRC3B-201ENST00000396641 MT2AP02795 61 aa9.8□□□□□ -0.84
LRRC3B-201ENST00000396641 PRR15LQ9BU68 103 aa9.77□□□□□ -0.85
LRRC3B-201ENST00000396641 P0C880 135 aa9.75□□□□□ -0.85
LRRC3B-201ENST00000396641 MT1FP04733 61 aa9.73□□□□□ -0.85
LRRC3B-201ENST00000396641 KRTAP10-10P60014 251 aa9.73□□□□□ -0.85
LRRC3B-201ENST00000396641 CRIPTQ9P021 101 aa9.67□□□□□ -0.86
LRRC3B-201ENST00000396641 A0A1B0GU33 70 aa9.61□□□□□ -0.87
LRRC3B-201ENST00000396641 PSPHP1O15172 72 aa9.61□□□□□ -0.87
LRRC3B-201ENST00000396641 R4GN34 69 aa9.58□□□□□ -0.88
LRRC3B-201ENST00000396641 M0QZ58 72 aa9.55□□□□□ -0.88
LRRC3B-201ENST00000396641 Q5VV11 94 aa9.54□□□□□ -0.88
LRRC3B-201ENST00000396641 KRTAP9-3Q9BYQ3 159 aa9.53□□□□□ -0.88
LRRC3B-201ENST00000396641 SPRR2GQ9BYE4 73 aa9.49□□□□□ -0.89
LRRC3B-201ENST00000396641 UQCR11O14957 56 aa9.48□□□□□ -0.89
LRRC3B-201ENST00000396641 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
LRRC3B-201ENST00000396641 KRTAP13-4Q3LI77 160 aa9.45□□□□□ -0.9
LRRC3B-201ENST00000396641 SPATA8Q6RVD6 105 aa9.42□□□□□ -0.9
LRRC3B-201ENST00000396641 A6NED7 52 aa9.34□□□□□ -0.91
LRRC3B-201ENST00000396641 BRK1Q8WUW1 75 aa9.34□□□□□ -0.91
LRRC3B-201ENST00000396641 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
LRRC3B-201ENST00000396641 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
LRRC3B-201ENST00000396641 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
LRRC3B-201ENST00000396641 KRTAP19-8Q3LI54 63 aa9.29□□□□□ -0.92
LRRC3B-201ENST00000396641 LCE2BO14633 110 aa9.29□□□□□ -0.92
LRRC3B-201ENST00000396641 A0A0D9SG42 100 aa9.25□□□□□ -0.93
LRRC3B-201ENST00000396641 A6NN06 94 aa9.24□□□□□ -0.93
LRRC3B-201ENST00000396641 A8MU10 97 aa9.23□□□□□ -0.93
LRRC3B-201ENST00000396641 CDC42SE1Q9NRR8 79 aa9.16□□□□□ -0.94
LRRC3B-201ENST00000396641 MT1BP07438 61 aa9.15□□□□□ -0.94
LRRC3B-201ENST00000396641 PLAC4Q8WY50 150 aa9.13□□□□□ -0.95
LRRC3B-201ENST00000396641 KRTAP12-1P59990 96 aa9.1□□□□□ -0.95
LRRC3B-201ENST00000396641 USH2AO75445 5202 aa9.1□□□□□ -0.95
LRRC3B-201ENST00000396641 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
LRRC3B-201ENST00000396641 KRTAP9-2Q9BYQ4 174 aa9.07□□□□□ -0.96
LRRC3B-201ENST00000396641 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
LRRC3B-201ENST00000396641 K7ERS5 55 aa9□□□□□ -0.97
LRRC3B-201ENST00000396641 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.98
LRRC3B-201ENST00000396641 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
LRRC3B-201ENST00000396641 PMAIP1Q13794 54 aa8.87□□□□□ -0.99
LRRC3B-201ENST00000396641 SSPOA2VEC9 5147 aa8.85□□□□□ -0.99
LRRC3B-201ENST00000396641 KRTAP19-6Q3LI70 58 aa8.84□□□□□ -0.99
LRRC3B-201ENST00000396641 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
LRRC3B-201ENST00000396641 MT1XP80297 61 aa8.78□□□□□ -1
LRRC3B-201ENST00000396641 KRTAP10-5P60370 271 aa8.78□□□□□ -1
LRRC3B-201ENST00000396641 CRCT1Q9UGL9 99 aa8.72□□□□□ -1.01
LRRC3B-201ENST00000396641 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
LRRC3B-201ENST00000396641 KTN1-AS1Q86SY8 53 aa8.58□□□□□ -1.04
LRRC3B-201ENST00000396641 ROMO1P60602 79 aa8.53□□□□□ -1.04
LRRC3B-201ENST00000396641 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.04
LRRC3B-201ENST00000396641 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
LRRC3B-201ENST00000396641 TNP1P09430 55 aa8.46□□□□□ -1.06
LRRC3B-201ENST00000396641 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
LRRC3B-201ENST00000396641 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
LRRC3B-201ENST00000396641 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
LRRC3B-201ENST00000396641 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.06
LRRC3B-201ENST00000396641 KRTAP10-12P60413 245 aa8.37□□□□□ -1.07
LRRC3B-201ENST00000396641 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
LRRC3B-201ENST00000396641 KRTAP23-1A1A580 65 aa8.16□□□□□ -1.1
LRRC3B-201ENST00000396641 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
LRRC3B-201ENST00000396641 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
LRRC3B-201ENST00000396641 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
LRRC3B-201ENST00000396641 LCE3AQ5TA76 89 aa8.1□□□□□ -1.11
LRRC3B-201ENST00000396641 KMT2DO14686 5537 aa8.1□□□□□ -1.11
LRRC3B-201ENST00000396641 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.07□□□□□ -1.12
LRRC3B-201ENST00000396641 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
LRRC3B-201ENST00000396641 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
LRRC3B-201ENST00000396641 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
LRRC3B-201ENST00000396641 KRTAP19-5Q3LI72 72 aa7.87□□□□□ -1.15
LRRC3B-201ENST00000396641 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
LRRC3B-201ENST00000396641 KRTAP5-9P26371 169 aa7.84□□□□□ -1.15
LRRC3B-201ENST00000396641 KRTAP6-3Q3LI67 103 aa7.84□□□□□ -1.15
LRRC3B-201ENST00000396641 KRTAP12-3P60328 96 aa7.83□□□□□ -1.16
LRRC3B-201ENST00000396641 SPRR2FQ96RM1 72 aa7.79□□□□□ -1.16
LRRC3B-201ENST00000396641 MT1EP04732 61 aa7.73□□□□□ -1.17
LRRC3B-201ENST00000396641 KRTAP9-7A8MTY7 169 aa7.72□□□□□ -1.17
LRRC3B-201ENST00000396641 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms