RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
CCHCR1-202ENST00000396263 TNXBP22105 4242 aa8.54□□□□□ -1.04
CCHCR1-202ENST00000396263 ROMO1P60602 79 aa8.54□□□□□ -1.04
CCHCR1-202ENST00000396263 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
CCHCR1-202ENST00000396263 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
CCHCR1-202ENST00000396263 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CCHCR1-202ENST00000396263 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
CCHCR1-202ENST00000396263 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
CCHCR1-202ENST00000396263 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
CCHCR1-202ENST00000396263 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
CCHCR1-202ENST00000396263 P0C880 135 aa8.37□□□□□ -1.07
CCHCR1-202ENST00000396263 A0A1B0GU33 70 aa8.36□□□□□ -1.07
CCHCR1-202ENST00000396263 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
CCHCR1-202ENST00000396263 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
CCHCR1-202ENST00000396263 HERC2O95714 4834 aa8.34□□□□□ -1.07
CCHCR1-202ENST00000396263 MT1HL1P0DM35 61 aa8.34□□□□□ -1.08
CCHCR1-202ENST00000396263 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
CCHCR1-202ENST00000396263 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
CCHCR1-202ENST00000396263 XP32Q5T750 250 aa8.24□□□□□ -1.09
CCHCR1-202ENST00000396263 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
CCHCR1-202ENST00000396263 K7ERS5 55 aa8.16□□□□□ -1.1
CCHCR1-202ENST00000396263 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
CCHCR1-202ENST00000396263 S4R3F8 94 aa8.11□□□□□ -1.11
CCHCR1-202ENST00000396263 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
CCHCR1-202ENST00000396263 TPRXLQ17RH7 258 aa8.09□□□□□ -1.11
CCHCR1-202ENST00000396263 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
CCHCR1-202ENST00000396263 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
CCHCR1-202ENST00000396263 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
CCHCR1-202ENST00000396263 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
CCHCR1-202ENST00000396263 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
CCHCR1-202ENST00000396263 LPAP08519 4548 aa8.01□□□□□ -1.13
CCHCR1-202ENST00000396263 J3QL48 77 aa8.01□□□□□ -1.13
CCHCR1-202ENST00000396263 NDUFAF8A1L188 74 aa7.99□□□□□ -1.13
CCHCR1-202ENST00000396263 A0A0D9SG42 100 aa7.97□□□□□ -1.13
CCHCR1-202ENST00000396263 LRP2P98164 4655 aa7.97□□□□□ -1.13
CCHCR1-202ENST00000396263 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
CCHCR1-202ENST00000396263 HERC1Q15751 4861 aa7.88□□□□□ -1.15
CCHCR1-202ENST00000396263 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.16
CCHCR1-202ENST00000396263 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
CCHCR1-202ENST00000396263 M0QZ58 72 aa7.74□□□□□ -1.17
CCHCR1-202ENST00000396263 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
CCHCR1-202ENST00000396263 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
CCHCR1-202ENST00000396263 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
CCHCR1-202ENST00000396263 MUC2Q02817 5179 aa7.62□□□□□ -1.19
CCHCR1-202ENST00000396263 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
CCHCR1-202ENST00000396263 R4GN34 69 aa7.52□□□□□ -1.21
CCHCR1-202ENST00000396263 KRTAP19-2Q3LHN2 52 aa7.44□□□□□ -1.22
CCHCR1-202ENST00000396263 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
CCHCR1-202ENST00000396263 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
CCHCR1-202ENST00000396263 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
CCHCR1-202ENST00000396263 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
CCHCR1-202ENST00000396263 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
CCHCR1-202ENST00000396263 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
CCHCR1-202ENST00000396263 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
CCHCR1-202ENST00000396263 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
CCHCR1-202ENST00000396263 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
CCHCR1-202ENST00000396263 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
CCHCR1-202ENST00000396263 MT1HP80294 61 aa7.02□□□□□ -1.29
CCHCR1-202ENST00000396263 M0R2T5 61 aa6.92□□□□□ -1.3
CCHCR1-202ENST00000396263 TNP1P09430 55 aa6.88□□□□□ -1.31
CCHCR1-202ENST00000396263 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
CCHCR1-202ENST00000396263 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
CCHCR1-202ENST00000396263 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
CCHCR1-202ENST00000396263 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
CCHCR1-202ENST00000396263 MT2AP02795 61 aa6.75□□□□□ -1.33
CCHCR1-202ENST00000396263 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
CCHCR1-202ENST00000396263 MT1FP04733 61 aa6.73□□□□□ -1.33
CCHCR1-202ENST00000396263 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
CCHCR1-202ENST00000396263 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
CCHCR1-202ENST00000396263 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
CCHCR1-202ENST00000396263 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
CCHCR1-202ENST00000396263 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
CCHCR1-202ENST00000396263 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
CCHCR1-202ENST00000396263 MT1BP07438 61 aa6.46□□□□□ -1.38
CCHCR1-202ENST00000396263 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
CCHCR1-202ENST00000396263 MT1XP80297 61 aa6.41□□□□□ -1.38
CCHCR1-202ENST00000396263 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
CCHCR1-202ENST00000396263 USH2AO75445 5202 aa6.36□□□□□ -1.39
CCHCR1-202ENST00000396263 LCE2BO14633 110 aa6.35□□□□□ -1.39
CCHCR1-202ENST00000396263 KRTAP10-12P60413 245 aa6.27□□□□□ -1.4
CCHCR1-202ENST00000396263 INE1O15225 51 aa6.26□□□□□ -1.41
CCHCR1-202ENST00000396263 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
CCHCR1-202ENST00000396263 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
CCHCR1-202ENST00000396263 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
CCHCR1-202ENST00000396263 SSPOA2VEC9 5147 aa6.09□□□□□ -1.44
CCHCR1-202ENST00000396263 KMT2DO14686 5537 aa6□□□□□ -1.45
CCHCR1-202ENST00000396263 LCE2DQ5TA82 110 aaPredicted RBP6□□□□□ -1.45
CCHCR1-202ENST00000396263 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
CCHCR1-202ENST00000396263 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
CCHCR1-202ENST00000396263 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
CCHCR1-202ENST00000396263 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
CCHCR1-202ENST00000396263 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CCHCR1-202ENST00000396263 KRTAP9-2Q9BYQ4 174 aa5.79□□□□□ -1.48
CCHCR1-202ENST00000396263 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
CCHCR1-202ENST00000396263 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.49
CCHCR1-202ENST00000396263 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
CCHCR1-202ENST00000396263 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
CCHCR1-202ENST00000396263 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
CCHCR1-202ENST00000396263 MT1EP04732 61 aa5.55□□□□□ -1.52
CCHCR1-202ENST00000396263 MT1LQ93083 61 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms