RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
HERPUD2-202ENST00000396081 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
HERPUD2-202ENST00000396081 S4R3F8 94 aa9.3□□□□□ -0.92
HERPUD2-202ENST00000396081 DYNC1H1Q14204 4646 aaKnown RBP9.29□□□□□ -0.92
HERPUD2-202ENST00000396081 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
HERPUD2-202ENST00000396081 NDUFAF8A1L188 74 aa9.23□□□□□ -0.93
HERPUD2-202ENST00000396081 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
HERPUD2-202ENST00000396081 PKHD1L1Q86WI1 4243 aa9.21□□□□□ -0.94
HERPUD2-202ENST00000396081 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
HERPUD2-202ENST00000396081 MYCBP2O75592 4640 aa9.13□□□□□ -0.95
HERPUD2-202ENST00000396081 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-202ENST00000396081 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
HERPUD2-202ENST00000396081 HSPG2P98160 4391 aa9.08□□□□□ -0.96
HERPUD2-202ENST00000396081 XP32Q5T750 250 aa9.08□□□□□ -0.96
HERPUD2-202ENST00000396081 LRP1Q07954 4544 aaKnown RBP9.08□□□□□ -0.96
HERPUD2-202ENST00000396081 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
HERPUD2-202ENST00000396081 A0A0A0MQY5 61 aa9.05□□□□□ -0.96
HERPUD2-202ENST00000396081 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
HERPUD2-202ENST00000396081 FAT3Q8TDW7 4589 aa9.02□□□□□ -0.96
HERPUD2-202ENST00000396081 J3QL48 77 aa8.99□□□□□ -0.97
HERPUD2-202ENST00000396081 M0QZ58 72 aa8.86□□□□□ -0.99
HERPUD2-202ENST00000396081 Q5VSD8 79 aa8.86□□□□□ -0.99
HERPUD2-202ENST00000396081 TNXBP22105 4242 aa8.84□□□□□ -0.99
HERPUD2-202ENST00000396081 LPAP08519 4548 aa8.75□□□□□ -1.01
HERPUD2-202ENST00000396081 R4GN34 69 aa8.73□□□□□ -1.01
HERPUD2-202ENST00000396081 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
HERPUD2-202ENST00000396081 LRP2P98164 4655 aa8.69□□□□□ -1.02
HERPUD2-202ENST00000396081 RYR2Q92736 4967 aa8.65□□□□□ -1.02
HERPUD2-202ENST00000396081 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
HERPUD2-202ENST00000396081 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
HERPUD2-202ENST00000396081 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
HERPUD2-202ENST00000396081 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
HERPUD2-202ENST00000396081 LUZP6Q538Z0 58 aa8.48□□□□□ -1.05
HERPUD2-202ENST00000396081 KIAA1109Q2LD37 5005 aa8.46□□□□□ -1.06
HERPUD2-202ENST00000396081 KRTAP21-3Q3LHN1 58 aa8.45□□□□□ -1.06
HERPUD2-202ENST00000396081 RYR1P21817 5038 aa8.45□□□□□ -1.06
HERPUD2-202ENST00000396081 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.06
HERPUD2-202ENST00000396081 RYR3Q15413 4870 aa8.37□□□□□ -1.07
HERPUD2-202ENST00000396081 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
HERPUD2-202ENST00000396081 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
HERPUD2-202ENST00000396081 PP632Q6XCG6 107 aa8.24□□□□□ -1.09
HERPUD2-202ENST00000396081 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
HERPUD2-202ENST00000396081 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
HERPUD2-202ENST00000396081 MUC17Q685J3 4493 aa8.06□□□□□ -1.12
HERPUD2-202ENST00000396081 TNP1P09430 55 aa8.02□□□□□ -1.13
HERPUD2-202ENST00000396081 EPPK1P58107 5090 aaKnown RBP7.95□□□□□ -1.14
HERPUD2-202ENST00000396081 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
HERPUD2-202ENST00000396081 MUC2Q02817 5179 aa7.89□□□□□ -1.15
HERPUD2-202ENST00000396081 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
HERPUD2-202ENST00000396081 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
HERPUD2-202ENST00000396081 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.18
HERPUD2-202ENST00000396081 HERC2O95714 4834 aa7.63□□□□□ -1.19
HERPUD2-202ENST00000396081 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
HERPUD2-202ENST00000396081 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
HERPUD2-202ENST00000396081 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
HERPUD2-202ENST00000396081 HERC1Q15751 4861 aa7.51□□□□□ -1.21
HERPUD2-202ENST00000396081 M0R2T5 61 aa7.5□□□□□ -1.21
HERPUD2-202ENST00000396081 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
HERPUD2-202ENST00000396081 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
HERPUD2-202ENST00000396081 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
HERPUD2-202ENST00000396081 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.22
HERPUD2-202ENST00000396081 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
HERPUD2-202ENST00000396081 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
HERPUD2-202ENST00000396081 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
HERPUD2-202ENST00000396081 MT1FP04733 61 aa7.2□□□□□ -1.26
HERPUD2-202ENST00000396081 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
HERPUD2-202ENST00000396081 INE1O15225 51 aa7.18□□□□□ -1.26
HERPUD2-202ENST00000396081 MT2AP02795 61 aa7.16□□□□□ -1.26
HERPUD2-202ENST00000396081 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
HERPUD2-202ENST00000396081 MT1HP80294 61 aa7.15□□□□□ -1.27
HERPUD2-202ENST00000396081 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
HERPUD2-202ENST00000396081 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
HERPUD2-202ENST00000396081 UBR4Q5T4S7 5183 aa7.07□□□□□ -1.28
HERPUD2-202ENST00000396081 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
HERPUD2-202ENST00000396081 MT1XP80297 61 aa7.05□□□□□ -1.28
HERPUD2-202ENST00000396081 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
HERPUD2-202ENST00000396081 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
HERPUD2-202ENST00000396081 MT1BP07438 61 aa7□□□□□ -1.29
HERPUD2-202ENST00000396081 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
HERPUD2-202ENST00000396081 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
HERPUD2-202ENST00000396081 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
HERPUD2-202ENST00000396081 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
HERPUD2-202ENST00000396081 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
HERPUD2-202ENST00000396081 KMT2DO14686 5537 aa6.65□□□□□ -1.34
HERPUD2-202ENST00000396081 USH2AO75445 5202 aa6.55□□□□□ -1.36
HERPUD2-202ENST00000396081 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
HERPUD2-202ENST00000396081 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
HERPUD2-202ENST00000396081 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
HERPUD2-202ENST00000396081 LCE2AQ5TA79 106 aaPredicted RBP6.49□□□□□ -1.37
HERPUD2-202ENST00000396081 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
HERPUD2-202ENST00000396081 LCE2BO14633 110 aa6.43□□□□□ -1.38
HERPUD2-202ENST00000396081 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
HERPUD2-202ENST00000396081 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
HERPUD2-202ENST00000396081 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
HERPUD2-202ENST00000396081 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
HERPUD2-202ENST00000396081 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
HERPUD2-202ENST00000396081 MT1LQ93083 61 aa6.12□□□□□ -1.43
HERPUD2-202ENST00000396081 MT1EP04732 61 aa6.06□□□□□ -1.44
HERPUD2-202ENST00000396081 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
HERPUD2-202ENST00000396081 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms