RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 Q5VSD8 79 aa8.54□□□□□ -1.04
C11orf49-204ENST00000395460 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
C11orf49-204ENST00000395460 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
C11orf49-204ENST00000395460 HSPG2P98160 4391 aa8.48□□□□□ -1.05
C11orf49-204ENST00000395460 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
C11orf49-204ENST00000395460 KMT2CQ8NEZ4 4911 aaKnown RBP8.47□□□□□ -1.05
C11orf49-204ENST00000395460 S4R3F8 94 aa8.46□□□□□ -1.06
C11orf49-204ENST00000395460 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
C11orf49-204ENST00000395460 RYR1P21817 5038 aa8.39□□□□□ -1.07
C11orf49-204ENST00000395460 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
C11orf49-204ENST00000395460 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
C11orf49-204ENST00000395460 ROMO1P60602 79 aa8.35□□□□□ -1.07
C11orf49-204ENST00000395460 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
C11orf49-204ENST00000395460 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
C11orf49-204ENST00000395460 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
C11orf49-204ENST00000395460 KRTAP17-1Q9BYP8 105 aa8.27□□□□□ -1.09
C11orf49-204ENST00000395460 P0C880 135 aa8.26□□□□□ -1.09
C11orf49-204ENST00000395460 A0A0D9SG42 100 aa8.23□□□□□ -1.09
C11orf49-204ENST00000395460 RYR3Q15413 4870 aa8.18□□□□□ -1.1
C11orf49-204ENST00000395460 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
C11orf49-204ENST00000395460 M0QZ58 72 aa8.13□□□□□ -1.11
C11orf49-204ENST00000395460 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
C11orf49-204ENST00000395460 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
C11orf49-204ENST00000395460 KRTAP12-1P59990 96 aa8.08□□□□□ -1.12
C11orf49-204ENST00000395460 LRP2P98164 4655 aa8.03□□□□□ -1.12
C11orf49-204ENST00000395460 LPAP08519 4548 aa8.01□□□□□ -1.13
C11orf49-204ENST00000395460 SPINT4Q6UDR6 99 aa7.99□□□□□ -1.13
C11orf49-204ENST00000395460 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
C11orf49-204ENST00000395460 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
C11orf49-204ENST00000395460 EPPK1P58107 5090 aaKnown RBP7.86□□□□□ -1.15
C11orf49-204ENST00000395460 H3BS24 57 aa7.85□□□□□ -1.15
C11orf49-204ENST00000395460 R4GN34 69 aa7.84□□□□□ -1.16
C11orf49-204ENST00000395460 ABCA13Q86UQ4 5058 aa7.82□□□□□ -1.16
C11orf49-204ENST00000395460 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
C11orf49-204ENST00000395460 MUC17Q685J3 4493 aa7.77□□□□□ -1.16
C11orf49-204ENST00000395460 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
C11orf49-204ENST00000395460 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
C11orf49-204ENST00000395460 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
C11orf49-204ENST00000395460 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
C11orf49-204ENST00000395460 J3QL48 77 aa7.66□□□□□ -1.18
C11orf49-204ENST00000395460 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
C11orf49-204ENST00000395460 HERC2O95714 4834 aa7.52□□□□□ -1.2
C11orf49-204ENST00000395460 PP632Q6XCG6 107 aa7.46□□□□□ -1.21
C11orf49-204ENST00000395460 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.22
C11orf49-204ENST00000395460 NDUFAF8A1L188 74 aa7.46□□□□□ -1.22
C11orf49-204ENST00000395460 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
C11orf49-204ENST00000395460 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
C11orf49-204ENST00000395460 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
C11orf49-204ENST00000395460 HERC1Q15751 4861 aa7.32□□□□□ -1.24
C11orf49-204ENST00000395460 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
C11orf49-204ENST00000395460 MUC2Q02817 5179 aa7.23□□□□□ -1.25
C11orf49-204ENST00000395460 TNP1P09430 55 aa7.21□□□□□ -1.25
C11orf49-204ENST00000395460 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
C11orf49-204ENST00000395460 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
C11orf49-204ENST00000395460 A0A0A0MQY5 61 aa7.15□□□□□ -1.26
C11orf49-204ENST00000395460 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.27
C11orf49-204ENST00000395460 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
C11orf49-204ENST00000395460 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
C11orf49-204ENST00000395460 MT1HP80294 61 aa6.96□□□□□ -1.3
C11orf49-204ENST00000395460 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
C11orf49-204ENST00000395460 M0R2T5 61 aa6.93□□□□□ -1.3
C11orf49-204ENST00000395460 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.31
C11orf49-204ENST00000395460 MT2AP02795 61 aa6.88□□□□□ -1.31
C11orf49-204ENST00000395460 MT1FP04733 61 aa6.86□□□□□ -1.31
C11orf49-204ENST00000395460 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.32
C11orf49-204ENST00000395460 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
C11orf49-204ENST00000395460 KRTAP10-10P60014 251 aa6.83□□□□□ -1.32
C11orf49-204ENST00000395460 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
C11orf49-204ENST00000395460 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
C11orf49-204ENST00000395460 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
C11orf49-204ENST00000395460 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
C11orf49-204ENST00000395460 MT1BP07438 61 aa6.68□□□□□ -1.34
C11orf49-204ENST00000395460 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
C11orf49-204ENST00000395460 MT1XP80297 61 aa6.63□□□□□ -1.35
C11orf49-204ENST00000395460 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
C11orf49-204ENST00000395460 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
C11orf49-204ENST00000395460 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
C11orf49-204ENST00000395460 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
C11orf49-204ENST00000395460 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.39
C11orf49-204ENST00000395460 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
C11orf49-204ENST00000395460 LCE2BO14633 110 aa6.23□□□□□ -1.41
C11orf49-204ENST00000395460 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
C11orf49-204ENST00000395460 INE1O15225 51 aa6.17□□□□□ -1.42
C11orf49-204ENST00000395460 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
C11orf49-204ENST00000395460 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
C11orf49-204ENST00000395460 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
C11orf49-204ENST00000395460 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
C11orf49-204ENST00000395460 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
C11orf49-204ENST00000395460 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
C11orf49-204ENST00000395460 KRTAP19-7Q3SYF9 63 aa5.92□□□□□ -1.46
C11orf49-204ENST00000395460 USH2AO75445 5202 aa5.91□□□□□ -1.46
C11orf49-204ENST00000395460 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.48
C11orf49-204ENST00000395460 KMT2DO14686 5537 aa5.83□□□□□ -1.48
C11orf49-204ENST00000395460 MT1EP04732 61 aa5.76□□□□□ -1.49
C11orf49-204ENST00000395460 MT1LQ93083 61 aa5.76□□□□□ -1.49
C11orf49-204ENST00000395460 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
C11orf49-204ENST00000395460 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
C11orf49-204ENST00000395460 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
C11orf49-204ENST00000395460 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
C11orf49-204ENST00000395460 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms