RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
PPP1CB-203ENST00000395366 TNP1P09430 55 aa7.15□□□□□ -1.27
PPP1CB-203ENST00000395366 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
PPP1CB-203ENST00000395366 DYNC1H1Q14204 4646 aaKnown RBP7.11□□□□□ -1.27
PPP1CB-203ENST00000395366 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
PPP1CB-203ENST00000395366 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
PPP1CB-203ENST00000395366 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.28
PPP1CB-203ENST00000395366 FAT1Q14517 4588 aa7.07□□□□□ -1.28
PPP1CB-203ENST00000395366 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
PPP1CB-203ENST00000395366 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
PPP1CB-203ENST00000395366 DYNC2H1Q8NCM8 4307 aaKnown RBP7.01□□□□□ -1.29
PPP1CB-203ENST00000395366 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
PPP1CB-203ENST00000395366 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
PPP1CB-203ENST00000395366 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
PPP1CB-203ENST00000395366 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
PPP1CB-203ENST00000395366 PP632Q6XCG6 107 aa6.96□□□□□ -1.29
PPP1CB-203ENST00000395366 LYSTQ99698 3801 aa6.94□□□□□ -1.3
PPP1CB-203ENST00000395366 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
PPP1CB-203ENST00000395366 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.31
PPP1CB-203ENST00000395366 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
PPP1CB-203ENST00000395366 DNAH7Q8WXX0 4024 aa6.86□□□□□ -1.31
PPP1CB-203ENST00000395366 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
PPP1CB-203ENST00000395366 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
PPP1CB-203ENST00000395366 RYR1P21817 5038 aa6.82□□□□□ -1.32
PPP1CB-203ENST00000395366 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
PPP1CB-203ENST00000395366 DNAH6Q9C0G6 4158 aa6.78□□□□□ -1.32
PPP1CB-203ENST00000395366 KIAA1109Q2LD37 5005 aa6.78□□□□□ -1.32
PPP1CB-203ENST00000395366 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
PPP1CB-203ENST00000395366 HYDINQ4G0P3 5121 aa6.71□□□□□ -1.34
PPP1CB-203ENST00000395366 RYR3Q15413 4870 aa6.71□□□□□ -1.34
PPP1CB-203ENST00000395366 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
PPP1CB-203ENST00000395366 RYR2Q92736 4967 aa6.66□□□□□ -1.34
PPP1CB-203ENST00000395366 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
PPP1CB-203ENST00000395366 MYCBP2O75592 4640 aa6.62□□□□□ -1.35
PPP1CB-203ENST00000395366 INE1O15225 51 aa6.61□□□□□ -1.35
PPP1CB-203ENST00000395366 LRP1Q07954 4544 aaKnown RBP6.61□□□□□ -1.35
PPP1CB-203ENST00000395366 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
PPP1CB-203ENST00000395366 PKHD1P08F94 4074 aa6.56□□□□□ -1.36
PPP1CB-203ENST00000395366 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
PPP1CB-203ENST00000395366 PKD1P98161 4303 aa6.44□□□□□ -1.38
PPP1CB-203ENST00000395366 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
PPP1CB-203ENST00000395366 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
PPP1CB-203ENST00000395366 HSPG2P98160 4391 aa6.39□□□□□ -1.39
PPP1CB-203ENST00000395366 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
PPP1CB-203ENST00000395366 HERC2O95714 4834 aa6.34□□□□□ -1.39
PPP1CB-203ENST00000395366 MT1HP80294 61 aa6.28□□□□□ -1.4
PPP1CB-203ENST00000395366 LRP2P98164 4655 aa6.25□□□□□ -1.41
PPP1CB-203ENST00000395366 KRTAP10-12P60413 245 aa6.21□□□□□ -1.41
PPP1CB-203ENST00000395366 BIRC6Q9NR09 4857 aa6.21□□□□□ -1.42
PPP1CB-203ENST00000395366 MT2AP02795 61 aa6.17□□□□□ -1.42
PPP1CB-203ENST00000395366 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
PPP1CB-203ENST00000395366 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
PPP1CB-203ENST00000395366 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
PPP1CB-203ENST00000395366 MT1FP04733 61 aa6.09□□□□□ -1.43
PPP1CB-203ENST00000395366 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
PPP1CB-203ENST00000395366 TNXBP22105 4242 aa6.07□□□□□ -1.44
PPP1CB-203ENST00000395366 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
PPP1CB-203ENST00000395366 LPAP08519 4548 aa6.04□□□□□ -1.44
PPP1CB-203ENST00000395366 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
PPP1CB-203ENST00000395366 HERC1Q15751 4861 aa5.97□□□□□ -1.45
PPP1CB-203ENST00000395366 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
PPP1CB-203ENST00000395366 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
PPP1CB-203ENST00000395366 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
PPP1CB-203ENST00000395366 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
PPP1CB-203ENST00000395366 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
PPP1CB-203ENST00000395366 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
PPP1CB-203ENST00000395366 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
PPP1CB-203ENST00000395366 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
PPP1CB-203ENST00000395366 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
PPP1CB-203ENST00000395366 MT1BP07438 61 aa5.66□□□□□ -1.5
PPP1CB-203ENST00000395366 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
PPP1CB-203ENST00000395366 MT1XP80297 61 aa5.62□□□□□ -1.51
PPP1CB-203ENST00000395366 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
PPP1CB-203ENST00000395366 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
PPP1CB-203ENST00000395366 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
PPP1CB-203ENST00000395366 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
PPP1CB-203ENST00000395366 RNF213Q63HN8 5207 aa5.53□□□□□ -1.52
PPP1CB-203ENST00000395366 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
PPP1CB-203ENST00000395366 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
PPP1CB-203ENST00000395366 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
PPP1CB-203ENST00000395366 MUC2Q02817 5179 aa5.44□□□□□ -1.54
PPP1CB-203ENST00000395366 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
PPP1CB-203ENST00000395366 LCE2BO14633 110 aa5.4□□□□□ -1.55
PPP1CB-203ENST00000395366 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
PPP1CB-203ENST00000395366 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
PPP1CB-203ENST00000395366 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
PPP1CB-203ENST00000395366 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
PPP1CB-203ENST00000395366 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
PPP1CB-203ENST00000395366 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
PPP1CB-203ENST00000395366 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.58
PPP1CB-203ENST00000395366 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
PPP1CB-203ENST00000395366 MT1GP13640 62 aa5.03□□□□□ -1.6
PPP1CB-203ENST00000395366 MT1EP04732 61 aa4.99□□□□□ -1.61
PPP1CB-203ENST00000395366 SPRR2EP22531 72 aa4.99□□□□□ -1.61
PPP1CB-203ENST00000395366 SPRR2BP35325 72 aa4.99□□□□□ -1.61
PPP1CB-203ENST00000395366 SPRR2AP35326 72 aa4.99□□□□□ -1.61
PPP1CB-203ENST00000395366 MT1LQ93083 61 aa4.98□□□□□ -1.61
PPP1CB-203ENST00000395366 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
PPP1CB-203ENST00000395366 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
PPP1CB-203ENST00000395366 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms