RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 SPANXA2-OT1Q8N9U9 137 aa7.78□□□□□ -1.16
PPP3CA-202ENST00000394853 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.17
PPP3CA-202ENST00000394853 RYR1P21817 5038 aa7.75□□□□□ -1.17
PPP3CA-202ENST00000394853 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
PPP3CA-202ENST00000394853 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
PPP3CA-202ENST00000394853 UQCR11O14957 56 aa7.73□□□□□ -1.17
PPP3CA-202ENST00000394853 KRTAP10-8P60410 259 aa7.73□□□□□ -1.17
PPP3CA-202ENST00000394853 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
PPP3CA-202ENST00000394853 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
PPP3CA-202ENST00000394853 HRES1P13985 223 aa7.69□□□□□ -1.18
PPP3CA-202ENST00000394853 TNXBP22105 4242 aa7.66□□□□□ -1.18
PPP3CA-202ENST00000394853 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
PPP3CA-202ENST00000394853 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
PPP3CA-202ENST00000394853 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
PPP3CA-202ENST00000394853 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
PPP3CA-202ENST00000394853 MT1HL1P0DM35 61 aa7.57□□□□□ -1.2
PPP3CA-202ENST00000394853 ACYP2P14621 99 aa7.56□□□□□ -1.2
PPP3CA-202ENST00000394853 XP32Q5T750 250 aa7.45□□□□□ -1.22
PPP3CA-202ENST00000394853 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
PPP3CA-202ENST00000394853 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
PPP3CA-202ENST00000394853 ABCA13Q86UQ4 5058 aa7.4□□□□□ -1.23
PPP3CA-202ENST00000394853 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
PPP3CA-202ENST00000394853 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
PPP3CA-202ENST00000394853 LPAP08519 4548 aa7.35□□□□□ -1.23
PPP3CA-202ENST00000394853 LRP2P98164 4655 aa7.35□□□□□ -1.23
PPP3CA-202ENST00000394853 HERC2O95714 4834 aa7.35□□□□□ -1.23
PPP3CA-202ENST00000394853 M0R2T5 61 aa7.34□□□□□ -1.23
PPP3CA-202ENST00000394853 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
PPP3CA-202ENST00000394853 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
PPP3CA-202ENST00000394853 C10orf95Q9H7T3 257 aa7.15□□□□□ -1.27
PPP3CA-202ENST00000394853 S4R3F8 94 aa7.13□□□□□ -1.27
PPP3CA-202ENST00000394853 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
PPP3CA-202ENST00000394853 HERC1Q15751 4861 aa7.03□□□□□ -1.28
PPP3CA-202ENST00000394853 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
PPP3CA-202ENST00000394853 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
PPP3CA-202ENST00000394853 MUC2Q02817 5179 aa6.99□□□□□ -1.29
PPP3CA-202ENST00000394853 A0A1B0GU33 70 aa6.97□□□□□ -1.29
PPP3CA-202ENST00000394853 R4GN34 69 aa6.96□□□□□ -1.3
PPP3CA-202ENST00000394853 H0YAA0 97 aa6.93□□□□□ -1.3
PPP3CA-202ENST00000394853 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
PPP3CA-202ENST00000394853 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
PPP3CA-202ENST00000394853 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
PPP3CA-202ENST00000394853 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
PPP3CA-202ENST00000394853 A0A0D9SG42 100 aa6.86□□□□□ -1.31
PPP3CA-202ENST00000394853 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
PPP3CA-202ENST00000394853 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
PPP3CA-202ENST00000394853 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
PPP3CA-202ENST00000394853 M0QZ58 72 aa6.74□□□□□ -1.33
PPP3CA-202ENST00000394853 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
PPP3CA-202ENST00000394853 RNF213Q63HN8 5207 aa6.68□□□□□ -1.34
PPP3CA-202ENST00000394853 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
PPP3CA-202ENST00000394853 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
PPP3CA-202ENST00000394853 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
PPP3CA-202ENST00000394853 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
PPP3CA-202ENST00000394853 KRTAP19-2Q3LHN2 52 aa6.63□□□□□ -1.35
PPP3CA-202ENST00000394853 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
PPP3CA-202ENST00000394853 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
PPP3CA-202ENST00000394853 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
PPP3CA-202ENST00000394853 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
PPP3CA-202ENST00000394853 MT1HP80294 61 aa6.42□□□□□ -1.38
PPP3CA-202ENST00000394853 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
PPP3CA-202ENST00000394853 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
PPP3CA-202ENST00000394853 MT2AP02795 61 aa6.18□□□□□ -1.42
PPP3CA-202ENST00000394853 MT1FP04733 61 aa6.14□□□□□ -1.43
PPP3CA-202ENST00000394853 INE1O15225 51 aa6.11□□□□□ -1.43
PPP3CA-202ENST00000394853 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
PPP3CA-202ENST00000394853 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
PPP3CA-202ENST00000394853 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
PPP3CA-202ENST00000394853 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
PPP3CA-202ENST00000394853 TNP1P09430 55 aa5.99□□□□□ -1.45
PPP3CA-202ENST00000394853 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
PPP3CA-202ENST00000394853 USH2AO75445 5202 aa5.84□□□□□ -1.47
PPP3CA-202ENST00000394853 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
PPP3CA-202ENST00000394853 MT1BP07438 61 aa5.8□□□□□ -1.48
PPP3CA-202ENST00000394853 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
PPP3CA-202ENST00000394853 LCE2BO14633 110 aa5.73□□□□□ -1.49
PPP3CA-202ENST00000394853 MT1XP80297 61 aa5.69□□□□□ -1.5
PPP3CA-202ENST00000394853 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
PPP3CA-202ENST00000394853 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
PPP3CA-202ENST00000394853 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
PPP3CA-202ENST00000394853 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
PPP3CA-202ENST00000394853 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
PPP3CA-202ENST00000394853 KMT2DO14686 5537 aa5.56□□□□□ -1.52
PPP3CA-202ENST00000394853 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
PPP3CA-202ENST00000394853 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
PPP3CA-202ENST00000394853 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
PPP3CA-202ENST00000394853 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
PPP3CA-202ENST00000394853 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
PPP3CA-202ENST00000394853 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
PPP3CA-202ENST00000394853 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
PPP3CA-202ENST00000394853 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
PPP3CA-202ENST00000394853 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
PPP3CA-202ENST00000394853 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
PPP3CA-202ENST00000394853 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
PPP3CA-202ENST00000394853 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
PPP3CA-202ENST00000394853 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
PPP3CA-202ENST00000394853 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
PPP3CA-202ENST00000394853 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
PPP3CA-202ENST00000394853 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
PPP3CA-202ENST00000394853 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms