RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
UBE2D3-207ENST00000394801 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
UBE2D3-207ENST00000394801 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
UBE2D3-207ENST00000394801 ABCA13Q86UQ4 5058 aa8.11□□□□□ -1.11
UBE2D3-207ENST00000394801 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-207ENST00000394801 COX6B2Q6YFQ2 88 aa8.06□□□□□ -1.12
UBE2D3-207ENST00000394801 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
UBE2D3-207ENST00000394801 RPL37P61927 97 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-207ENST00000394801 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
UBE2D3-207ENST00000394801 XP32Q5T750 250 aa8.02□□□□□ -1.13
UBE2D3-207ENST00000394801 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
UBE2D3-207ENST00000394801 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
UBE2D3-207ENST00000394801 H0YAA0 97 aa7.89□□□□□ -1.15
UBE2D3-207ENST00000394801 HERC1Q15751 4861 aa7.88□□□□□ -1.15
UBE2D3-207ENST00000394801 A0A1B0GU33 70 aa7.84□□□□□ -1.15
UBE2D3-207ENST00000394801 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
UBE2D3-207ENST00000394801 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
UBE2D3-207ENST00000394801 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
UBE2D3-207ENST00000394801 LRP2P98164 4655 aa7.79□□□□□ -1.16
UBE2D3-207ENST00000394801 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
UBE2D3-207ENST00000394801 S4R3F8 94 aa7.75□□□□□ -1.17
UBE2D3-207ENST00000394801 LPAP08519 4548 aa7.74□□□□□ -1.17
UBE2D3-207ENST00000394801 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
UBE2D3-207ENST00000394801 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
UBE2D3-207ENST00000394801 H3BS24 57 aa7.67□□□□□ -1.18
UBE2D3-207ENST00000394801 K7ERS5 55 aa7.67□□□□□ -1.18
UBE2D3-207ENST00000394801 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
UBE2D3-207ENST00000394801 ROMO1P60602 79 aa7.61□□□□□ -1.19
UBE2D3-207ENST00000394801 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
UBE2D3-207ENST00000394801 P0C880 135 aa7.54□□□□□ -1.2
UBE2D3-207ENST00000394801 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-207ENST00000394801 MUC17Q685J3 4493 aa7.51□□□□□ -1.21
UBE2D3-207ENST00000394801 J3QL48 77 aa7.5□□□□□ -1.21
UBE2D3-207ENST00000394801 CRIPTQ9P021 101 aa7.5□□□□□ -1.21
UBE2D3-207ENST00000394801 HMCN2Q8NDA2 5059 aa7.44□□□□□ -1.22
UBE2D3-207ENST00000394801 A0A0D9SG42 100 aa7.41□□□□□ -1.22
UBE2D3-207ENST00000394801 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.23
UBE2D3-207ENST00000394801 M0QZ58 72 aa7.36□□□□□ -1.23
UBE2D3-207ENST00000394801 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
UBE2D3-207ENST00000394801 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
UBE2D3-207ENST00000394801 KRTAP12-1P59990 96 aa7.27□□□□□ -1.24
UBE2D3-207ENST00000394801 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
UBE2D3-207ENST00000394801 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
UBE2D3-207ENST00000394801 R4GN34 69 aa7.17□□□□□ -1.26
UBE2D3-207ENST00000394801 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
UBE2D3-207ENST00000394801 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
UBE2D3-207ENST00000394801 MUC2Q02817 5179 aa7.14□□□□□ -1.27
UBE2D3-207ENST00000394801 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-207ENST00000394801 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-207ENST00000394801 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
UBE2D3-207ENST00000394801 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
UBE2D3-207ENST00000394801 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
UBE2D3-207ENST00000394801 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
UBE2D3-207ENST00000394801 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
UBE2D3-207ENST00000394801 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
UBE2D3-207ENST00000394801 MT1HP80294 61 aa6.73□□□□□ -1.33
UBE2D3-207ENST00000394801 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
UBE2D3-207ENST00000394801 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
UBE2D3-207ENST00000394801 M0R2T5 61 aa6.66□□□□□ -1.34
UBE2D3-207ENST00000394801 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
UBE2D3-207ENST00000394801 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
UBE2D3-207ENST00000394801 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
UBE2D3-207ENST00000394801 MT2AP02795 61 aa6.58□□□□□ -1.36
UBE2D3-207ENST00000394801 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
UBE2D3-207ENST00000394801 MT1FP04733 61 aa6.55□□□□□ -1.36
UBE2D3-207ENST00000394801 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
UBE2D3-207ENST00000394801 TNP1P09430 55 aa6.53□□□□□ -1.36
UBE2D3-207ENST00000394801 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
UBE2D3-207ENST00000394801 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-207ENST00000394801 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
UBE2D3-207ENST00000394801 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
UBE2D3-207ENST00000394801 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
UBE2D3-207ENST00000394801 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
UBE2D3-207ENST00000394801 A0A0A0MQY5 61 aa6.33□□□□□ -1.4
UBE2D3-207ENST00000394801 MT1BP07438 61 aa6.32□□□□□ -1.4
UBE2D3-207ENST00000394801 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
UBE2D3-207ENST00000394801 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
UBE2D3-207ENST00000394801 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
UBE2D3-207ENST00000394801 MT1XP80297 61 aa6.22□□□□□ -1.41
UBE2D3-207ENST00000394801 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
UBE2D3-207ENST00000394801 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
UBE2D3-207ENST00000394801 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
UBE2D3-207ENST00000394801 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
UBE2D3-207ENST00000394801 LCE2BO14633 110 aa6.06□□□□□ -1.44
UBE2D3-207ENST00000394801 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
UBE2D3-207ENST00000394801 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
UBE2D3-207ENST00000394801 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
UBE2D3-207ENST00000394801 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
UBE2D3-207ENST00000394801 USH2AO75445 5202 aa5.86□□□□□ -1.47
UBE2D3-207ENST00000394801 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
UBE2D3-207ENST00000394801 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
UBE2D3-207ENST00000394801 INE1O15225 51 aa5.72□□□□□ -1.49
UBE2D3-207ENST00000394801 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
UBE2D3-207ENST00000394801 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-207ENST00000394801 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-207ENST00000394801 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
UBE2D3-207ENST00000394801 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
UBE2D3-207ENST00000394801 KMT2DO14686 5537 aa5.65□□□□□ -1.51
UBE2D3-207ENST00000394801 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
UBE2D3-207ENST00000394801 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms