RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 HECTD4Q9Y4D8 3996 aa3.69□□□□□ -1.82
CHD2-201ENST00000394196 ZNF469Q96JG9 3925 aaPredicted RBP3.67□□□□□ -1.82
CHD2-201ENST00000394196 ANK2Q01484 3957 aa3.63□□□□□ -1.83
CHD2-201ENST00000394196 CSMD3Q7Z407 3707 aa3.59□□□□□ -1.84
CHD2-201ENST00000394196 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
CHD2-201ENST00000394196 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
CHD2-201ENST00000394196 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
CHD2-201ENST00000394196 DNAH7Q8WXX0 4024 aa3.52□□□□□ -1.85
CHD2-201ENST00000394196 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
CHD2-201ENST00000394196 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
CHD2-201ENST00000394196 CMYA5Q8N3K9 4069 aa3.46□□□□□ -1.85
CHD2-201ENST00000394196 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
CHD2-201ENST00000394196 LORP23490 312 aaPredicted RBP3.45□□□□□ -1.86
CHD2-201ENST00000394196 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
CHD2-201ENST00000394196 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
CHD2-201ENST00000394196 DNAH2Q9P225 4427 aa3.41□□□□□ -1.86
CHD2-201ENST00000394196 HUWE1Q7Z6Z7 4374 aaKnown RBP3.38□□□□□ -1.87
CHD2-201ENST00000394196 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
CHD2-201ENST00000394196 DNAH1Q9P2D7 4330 aa3.34□□□□□ -1.87
CHD2-201ENST00000394196 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.88
CHD2-201ENST00000394196 FRAS1Q86XX4 4008 aa3.31□□□□□ -1.88
CHD2-201ENST00000394196 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
CHD2-201ENST00000394196 DNAH6Q9C0G6 4158 aa3.28□□□□□ -1.88
CHD2-201ENST00000394196 DNAH8Q96JB1 4490 aa3.23□□□□□ -1.89
CHD2-201ENST00000394196 KMT2AQ03164 3969 aa3.23□□□□□ -1.89
CHD2-201ENST00000394196 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.9
CHD2-201ENST00000394196 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
CHD2-201ENST00000394196 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
CHD2-201ENST00000394196 DNAH10Q8IVF4 4471 aa3.17□□□□□ -1.9
CHD2-201ENST00000394196 MT1HP80294 61 aa3.15□□□□□ -1.9
CHD2-201ENST00000394196 MT2AP02795 61 aa3.15□□□□□ -1.91
CHD2-201ENST00000394196 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
CHD2-201ENST00000394196 DNAH11Q96DT5 4516 aa3.11□□□□□ -1.91
CHD2-201ENST00000394196 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
CHD2-201ENST00000394196 LCE3BQ5TA77 95 aa3.09□□□□□ -1.92
CHD2-201ENST00000394196 DNAH17Q9UFH2 4485 aa3.08□□□□□ -1.92
CHD2-201ENST00000394196 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
CHD2-201ENST00000394196 PRKDCP78527 4128 aaKnown RBP3.06□□□□□ -1.92
CHD2-201ENST00000394196 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
CHD2-201ENST00000394196 MT1FP04733 61 aa3.03□□□□□ -1.92
CHD2-201ENST00000394196 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.92
CHD2-201ENST00000394196 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.93
CHD2-201ENST00000394196 DYNC2H1Q8NCM8 4307 aaKnown RBP3.02□□□□□ -1.93
CHD2-201ENST00000394196 VPS13DQ5THJ4 4388 aa3.01□□□□□ -1.93
CHD2-201ENST00000394196 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
CHD2-201ENST00000394196 MT1GP13640 62 aa3□□□□□ -1.93
CHD2-201ENST00000394196 PRM1P04553 51 aa2.96□□□□□ -1.94
CHD2-201ENST00000394196 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
CHD2-201ENST00000394196 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
CHD2-201ENST00000394196 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
CHD2-201ENST00000394196 MT1LQ93083 61 aa2.95□□□□□ -1.94
CHD2-201ENST00000394196 MT1XP80297 61 aa2.94□□□□□ -1.94
CHD2-201ENST00000394196 LCE2BO14633 110 aa2.91□□□□□ -1.94
CHD2-201ENST00000394196 SPRR2EP22531 72 aa2.89□□□□□ -1.95
CHD2-201ENST00000394196 SPRR2BP35325 72 aa2.89□□□□□ -1.95
CHD2-201ENST00000394196 SPRR2AP35326 72 aa2.89□□□□□ -1.95
CHD2-201ENST00000394196 FAT1Q14517 4588 aa2.89□□□□□ -1.95
CHD2-201ENST00000394196 DNAH5Q8TE73 4624 aa2.86□□□□□ -1.95
CHD2-201ENST00000394196 SACSQ9NZJ4 4579 aa2.83□□□□□ -1.96
CHD2-201ENST00000394196 SPRR2DP22532 72 aa2.82□□□□□ -1.96
CHD2-201ENST00000394196 PLECQ15149 4684 aaKnown RBP2.81□□□□□ -1.96
CHD2-201ENST00000394196 MT1EP04732 61 aa2.8□□□□□ -1.96
CHD2-201ENST00000394196 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
CHD2-201ENST00000394196 MT1BP07438 61 aa2.79□□□□□ -1.96
CHD2-201ENST00000394196 DYNC1H1Q14204 4646 aaKnown RBP2.79□□□□□ -1.96
CHD2-201ENST00000394196 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
CHD2-201ENST00000394196 HSPG2P98160 4391 aa2.75□□□□□ -1.97
CHD2-201ENST00000394196 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
CHD2-201ENST00000394196 PKHD1L1Q86WI1 4243 aa2.74□□□□□ -1.97
CHD2-201ENST00000394196 PKD1P98161 4303 aa2.73□□□□□ -1.97
CHD2-201ENST00000394196 STARD9Q9P2P6 4700 aa2.73□□□□□ -1.97
CHD2-201ENST00000394196 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
CHD2-201ENST00000394196 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
CHD2-201ENST00000394196 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
CHD2-201ENST00000394196 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
CHD2-201ENST00000394196 TNXBP22105 4242 aa2.69□□□□□ -1.98
CHD2-201ENST00000394196 LCE2CQ5TA81 110 aa2.68□□□□□ -1.98
CHD2-201ENST00000394196 MT1AP04731 61 aa2.68□□□□□ -1.98
CHD2-201ENST00000394196 HYDINQ4G0P3 5121 aa2.66□□□□□ -1.98
CHD2-201ENST00000394196 KRTAP4-8A0A0G2JLE6 195 aa2.66□□□□□ -1.98
CHD2-201ENST00000394196 KRTAP4-8Q9BYQ9 185 aa2.66□□□□□ -1.98
CHD2-201ENST00000394196 FAT3Q8TDW7 4589 aa2.66□□□□□ -1.98
CHD2-201ENST00000394196 KRTAP9-3Q9BYQ3 159 aa2.64□□□□□ -1.99
CHD2-201ENST00000394196 MT1MQ8N339 61 aa2.64□□□□□ -1.99
CHD2-201ENST00000394196 MYCBP2O75592 4640 aa2.63□□□□□ -1.99
CHD2-201ENST00000394196 DNHD1Q96M86 4753 aa2.62□□□□□ -1.99
CHD2-201ENST00000394196 LCE2DQ5TA82 110 aaPredicted RBP2.6□□□□□ -1.99
CHD2-201ENST00000394196 LPAP08519 4548 aa2.57□□□□□ -2
CHD2-201ENST00000394196 KRTAP4-7Q9BYR0 210 aa2.52□□□□□ -2.01
CHD2-201ENST00000394196 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
CHD2-201ENST00000394196 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
CHD2-201ENST00000394196 RYR1P21817 5038 aa2.49□□□□□ -2.01
CHD2-201ENST00000394196 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CHD2-201ENST00000394196 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
CHD2-201ENST00000394196 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
CHD2-201ENST00000394196 LOC100996750A0A140TA64 210 aa2.42□□□□□ -2.02
CHD2-201ENST00000394196 MT4P47944 62 aa2.39□□□□□ -2.03
CHD2-201ENST00000394196 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
CHD2-201ENST00000394196 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
CHD2-201ENST00000394196 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms