RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 TPRXLQ17RH7 258 aa11.71□□□□□ -0.54
RARA-202ENST00000394081 BIRC6Q9NR09 4857 aa11.69□□□□□ -0.54
RARA-202ENST00000394081 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
RARA-202ENST00000394081 PKHD1P08F94 4074 aa11.66□□□□□ -0.54
RARA-202ENST00000394081 SPINT4Q6UDR6 99 aa11.66□□□□□ -0.54
RARA-202ENST00000394081 SMR3BP02814 79 aaPredicted RBP11.65□□□□□ -0.55
RARA-202ENST00000394081 A0A0D9SG42 100 aa11.63□□□□□ -0.55
RARA-202ENST00000394081 APOBP04114 4563 aaKnown RBP11.62□□□□□ -0.55
RARA-202ENST00000394081 S4R3F8 94 aa11.6□□□□□ -0.55
RARA-202ENST00000394081 KRTAP15-1Q3LI76 137 aa11.51□□□□□ -0.57
RARA-202ENST00000394081 C10orf95Q9H7T3 257 aa11.47□□□□□ -0.57
RARA-202ENST00000394081 DYNC1H1Q14204 4646 aaKnown RBP11.45□□□□□ -0.58
RARA-202ENST00000394081 KRTAP12-2P59991 146 aa11.42□□□□□ -0.58
RARA-202ENST00000394081 A0A1B0GVY2 172 aa11.41□□□□□ -0.58
RARA-202ENST00000394081 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
RARA-202ENST00000394081 KRTAP10-8P60410 259 aa11.39□□□□□ -0.59
RARA-202ENST00000394081 FAT1Q14517 4588 aa11.36□□□□□ -0.59
RARA-202ENST00000394081 KRTAP12-1P59990 96 aa11.35□□□□□ -0.59
RARA-202ENST00000394081 XP32Q5T750 250 aa11.33□□□□□ -0.6
RARA-202ENST00000394081 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
RARA-202ENST00000394081 NDUFAF8A1L188 74 aa11.32□□□□□ -0.6
RARA-202ENST00000394081 KIAA1109Q2LD37 5005 aa11.29□□□□□ -0.6
RARA-202ENST00000394081 M0QZ58 72 aa11.28□□□□□ -0.6
RARA-202ENST00000394081 HERC2O95714 4834 aa11.28□□□□□ -0.6
RARA-202ENST00000394081 LRP1Q07954 4544 aaKnown RBP11.27□□□□□ -0.6
RARA-202ENST00000394081 KRTAP17-1Q9BYP8 105 aa11.26□□□□□ -0.61
RARA-202ENST00000394081 TNXBP22105 4242 aa11.25□□□□□ -0.61
RARA-202ENST00000394081 PCLOQ9Y6V0 5065 aa11.2□□□□□ -0.62
RARA-202ENST00000394081 HSPG2P98160 4391 aa11.13□□□□□ -0.63
RARA-202ENST00000394081 RYR1P21817 5038 aa11.06□□□□□ -0.64
RARA-202ENST00000394081 ABCA13Q86UQ4 5058 aa11□□□□□ -0.65
RARA-202ENST00000394081 KRTAP4-5Q9BYR2 181 aa10.96□□□□□ -0.65
RARA-202ENST00000394081 Q5VSD8 79 aa10.9□□□□□ -0.66
RARA-202ENST00000394081 R4GN34 69 aa10.78□□□□□ -0.68
RARA-202ENST00000394081 MYCBP2O75592 4640 aa10.78□□□□□ -0.68
RARA-202ENST00000394081 PLAC4Q8WY50 150 aa10.75□□□□□ -0.69
RARA-202ENST00000394081 MT1HL1P0DM35 61 aa10.73□□□□□ -0.69
RARA-202ENST00000394081 HERC1Q15751 4861 aa10.62□□□□□ -0.71
RARA-202ENST00000394081 PP632Q6XCG6 107 aa10.6□□□□□ -0.71
RARA-202ENST00000394081 LPAP08519 4548 aa10.55□□□□□ -0.72
RARA-202ENST00000394081 LRP2P98164 4655 aa10.48□□□□□ -0.73
RARA-202ENST00000394081 LUZP6Q538Z0 58 aa10.43□□□□□ -0.74
RARA-202ENST00000394081 LORP23490 312 aaPredicted RBP10.42□□□□□ -0.74
RARA-202ENST00000394081 SEC61BP60468 96 aaKnown RBP10.34□□□□□ -0.75
RARA-202ENST00000394081 CAMK2N1Q7Z7J9 78 aa10.27□□□□□ -0.76
RARA-202ENST00000394081 A0A0A0MQY5 61 aa10.27□□□□□ -0.77
RARA-202ENST00000394081 J3QL48 77 aa10.22□□□□□ -0.77
RARA-202ENST00000394081 KRTAP23-1A1A580 65 aa10.19□□□□□ -0.78
RARA-202ENST00000394081 MUC17Q685J3 4493 aa10.16□□□□□ -0.78
RARA-202ENST00000394081 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
RARA-202ENST00000394081 KRTAP19-2Q3LHN2 52 aa10.07□□□□□ -0.8
RARA-202ENST00000394081 KRTAP4-1Q9BYQ7 146 aa10.05□□□□□ -0.8
RARA-202ENST00000394081 UBR4Q5T4S7 5183 aa10.05□□□□□ -0.8
RARA-202ENST00000394081 SPRR5A0A1B0GTR4 108 aa10.04□□□□□ -0.8
RARA-202ENST00000394081 TNP1P09430 55 aa10.03□□□□□ -0.8
RARA-202ENST00000394081 RNF213Q63HN8 5207 aa9.77□□□□□ -0.84
RARA-202ENST00000394081 FLGP20930 4061 aaPredicted RBP9.7□□□□□ -0.86
RARA-202ENST00000394081 SPRR2GQ9BYE4 73 aa9.5□□□□□ -0.89
RARA-202ENST00000394081 MUC2Q02817 5179 aa9.43□□□□□ -0.9
RARA-202ENST00000394081 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
RARA-202ENST00000394081 LCE3AQ5TA76 89 aa9.34□□□□□ -0.91
RARA-202ENST00000394081 KRTAP19-1Q8IUB9 90 aa9.34□□□□□ -0.91
RARA-202ENST00000394081 INE1O15225 51 aa9.3□□□□□ -0.92
RARA-202ENST00000394081 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
RARA-202ENST00000394081 LCE2CQ5TA81 110 aa9.2□□□□□ -0.94
RARA-202ENST00000394081 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
RARA-202ENST00000394081 KRTAP19-8Q3LI54 63 aa9.01□□□□□ -0.97
RARA-202ENST00000394081 M0R2T5 61 aa8.95□□□□□ -0.98
RARA-202ENST00000394081 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
RARA-202ENST00000394081 KRTAP12-3P60328 96 aa8.93□□□□□ -0.98
RARA-202ENST00000394081 MT2AP02795 61 aa8.92□□□□□ -0.98
RARA-202ENST00000394081 MT1FP04733 61 aa8.92□□□□□ -0.98
RARA-202ENST00000394081 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
RARA-202ENST00000394081 MT1HP80294 61 aa8.91□□□□□ -0.98
RARA-202ENST00000394081 KRTAP9-2Q9BYQ4 174 aa8.88□□□□□ -0.99
RARA-202ENST00000394081 KRTAP10-5P60370 271 aa8.87□□□□□ -0.99
RARA-202ENST00000394081 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
RARA-202ENST00000394081 MT1XP80297 61 aa8.84□□□□□ -0.99
RARA-202ENST00000394081 KRTAP9-8Q9BYQ0 159 aa8.81□□□□□ -1
RARA-202ENST00000394081 MT1BP07438 61 aa8.78□□□□□ -1
RARA-202ENST00000394081 KRTAP9-6A0A140TA67 174 aa8.6□□□□□ -1.03
RARA-202ENST00000394081 FSIP2Q5CZC0 6907 aa8.58□□□□□ -1.04
RARA-202ENST00000394081 KRTAP10-7P60409 375 aaPredicted RBP8.57□□□□□ -1.04
RARA-202ENST00000394081 LCE3CQ5T5A8 94 aa8.45□□□□□ -1.06
RARA-202ENST00000394081 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
RARA-202ENST00000394081 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
RARA-202ENST00000394081 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
RARA-202ENST00000394081 KRTAP19-5Q3LI72 72 aa8.33□□□□□ -1.08
RARA-202ENST00000394081 KRTAP2-3P0C7H8 128 aa8.14□□□□□ -1.11
RARA-202ENST00000394081 KRTAP2-4Q9BYR9 128 aa8.14□□□□□ -1.11
RARA-202ENST00000394081 KRTAP2-1Q9BYU5 128 aa8.14□□□□□ -1.11
RARA-202ENST00000394081 KRTAP19-4Q3LI73 84 aa8.12□□□□□ -1.11
RARA-202ENST00000394081 KRTAP9-6A8MVA2 160 aa8.1□□□□□ -1.11
RARA-202ENST00000394081 USH2AO75445 5202 aa7.99□□□□□ -1.13
RARA-202ENST00000394081 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
RARA-202ENST00000394081 LCE2BO14633 110 aa7.94□□□□□ -1.14
RARA-202ENST00000394081 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
RARA-202ENST00000394081 KRTAP4-8A0A0G2JLE6 195 aa7.86□□□□□ -1.15
RARA-202ENST00000394081 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
RARA-202ENST00000394081 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms