RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 P0C880 135 aa8.6□□□□□ -1.03
CNP-201ENST00000393888 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
CNP-201ENST00000393888 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
CNP-201ENST00000393888 APOBP04114 4563 aaKnown RBP8.53□□□□□ -1.04
CNP-201ENST00000393888 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
CNP-201ENST00000393888 RPL37P61927 97 aaKnown RBP8.52□□□□□ -1.05
CNP-201ENST00000393888 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
CNP-201ENST00000393888 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
CNP-201ENST00000393888 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
CNP-201ENST00000393888 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
CNP-201ENST00000393888 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
CNP-201ENST00000393888 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
CNP-201ENST00000393888 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
CNP-201ENST00000393888 HSPG2P98160 4391 aa8.41□□□□□ -1.06
CNP-201ENST00000393888 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
CNP-201ENST00000393888 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
CNP-201ENST00000393888 KRTAP17-1Q9BYP8 105 aa8.38□□□□□ -1.07
CNP-201ENST00000393888 RYR1P21817 5038 aa8.38□□□□□ -1.07
CNP-201ENST00000393888 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
CNP-201ENST00000393888 S4R3F8 94 aa8.33□□□□□ -1.08
CNP-201ENST00000393888 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
CNP-201ENST00000393888 MYCBP2O75592 4640 aa8.31□□□□□ -1.08
CNP-201ENST00000393888 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
CNP-201ENST00000393888 NDUFAF8A1L188 74 aa8.24□□□□□ -1.09
CNP-201ENST00000393888 Q5VSD8 79 aa8.24□□□□□ -1.09
CNP-201ENST00000393888 TNXBP22105 4242 aa8.24□□□□□ -1.09
CNP-201ENST00000393888 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.09
CNP-201ENST00000393888 XP32Q5T750 250 aa8.18□□□□□ -1.1
CNP-201ENST00000393888 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
CNP-201ENST00000393888 HERC2O95714 4834 aa8.17□□□□□ -1.1
CNP-201ENST00000393888 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
CNP-201ENST00000393888 LPAP08519 4548 aa8.15□□□□□ -1.11
CNP-201ENST00000393888 ABCA13Q86UQ4 5058 aa8.08□□□□□ -1.12
CNP-201ENST00000393888 LRP2P98164 4655 aa7.94□□□□□ -1.14
CNP-201ENST00000393888 PCLOQ9Y6V0 5065 aa7.94□□□□□ -1.14
CNP-201ENST00000393888 M0QZ58 72 aa7.93□□□□□ -1.14
CNP-201ENST00000393888 MT1HL1P0DM35 61 aa7.9□□□□□ -1.15
CNP-201ENST00000393888 R4GN34 69 aa7.78□□□□□ -1.16
CNP-201ENST00000393888 J3QL48 77 aa7.76□□□□□ -1.17
CNP-201ENST00000393888 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
CNP-201ENST00000393888 PLAC4Q8WY50 150 aa7.71□□□□□ -1.17
CNP-201ENST00000393888 HERC1Q15751 4861 aa7.7□□□□□ -1.18
CNP-201ENST00000393888 MUC17Q685J3 4493 aa7.51□□□□□ -1.21
CNP-201ENST00000393888 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
CNP-201ENST00000393888 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
CNP-201ENST00000393888 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
CNP-201ENST00000393888 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
CNP-201ENST00000393888 KRTAP4-1Q9BYQ7 146 aa7.43□□□□□ -1.22
CNP-201ENST00000393888 MUC2Q02817 5179 aa7.35□□□□□ -1.23
CNP-201ENST00000393888 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
CNP-201ENST00000393888 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
CNP-201ENST00000393888 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
CNP-201ENST00000393888 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
CNP-201ENST00000393888 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
CNP-201ENST00000393888 TNP1P09430 55 aa7.14□□□□□ -1.27
CNP-201ENST00000393888 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
CNP-201ENST00000393888 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
CNP-201ENST00000393888 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
CNP-201ENST00000393888 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
CNP-201ENST00000393888 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
CNP-201ENST00000393888 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
CNP-201ENST00000393888 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
CNP-201ENST00000393888 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
CNP-201ENST00000393888 MT1HP80294 61 aa6.67□□□□□ -1.34
CNP-201ENST00000393888 M0R2T5 61 aa6.65□□□□□ -1.34
CNP-201ENST00000393888 LCE2AQ5TA79 106 aaPredicted RBP6.59□□□□□ -1.35
CNP-201ENST00000393888 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
CNP-201ENST00000393888 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
CNP-201ENST00000393888 MT1FP04733 61 aa6.53□□□□□ -1.36
CNP-201ENST00000393888 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
CNP-201ENST00000393888 MT2AP02795 61 aa6.48□□□□□ -1.37
CNP-201ENST00000393888 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
CNP-201ENST00000393888 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
CNP-201ENST00000393888 INE1O15225 51 aa6.41□□□□□ -1.38
CNP-201ENST00000393888 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.39
CNP-201ENST00000393888 MT1XP80297 61 aa6.39□□□□□ -1.39
CNP-201ENST00000393888 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
CNP-201ENST00000393888 MT1BP07438 61 aa6.35□□□□□ -1.39
CNP-201ENST00000393888 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
CNP-201ENST00000393888 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
CNP-201ENST00000393888 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
CNP-201ENST00000393888 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
CNP-201ENST00000393888 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
CNP-201ENST00000393888 KMT2DO14686 5537 aa6.15□□□□□ -1.43
CNP-201ENST00000393888 USH2AO75445 5202 aa6.11□□□□□ -1.43
CNP-201ENST00000393888 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
CNP-201ENST00000393888 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
CNP-201ENST00000393888 LCE2BO14633 110 aa6.08□□□□□ -1.44
CNP-201ENST00000393888 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
CNP-201ENST00000393888 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
CNP-201ENST00000393888 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
CNP-201ENST00000393888 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
CNP-201ENST00000393888 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
CNP-201ENST00000393888 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
CNP-201ENST00000393888 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
CNP-201ENST00000393888 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
CNP-201ENST00000393888 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
CNP-201ENST00000393888 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
CNP-201ENST00000393888 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
CNP-201ENST00000393888 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms