RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 LAMA5O15230 3695 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 SZT2Q5T011 3432 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 USP34Q70CQ2 3546 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 KRTAP9-8Q9BYQ0 159 aa1.24□□□□□ -2.21
PHF3-202ENST00000393387 DNAH12Q6ZR08 3092 aa1.24□□□□□ -2.21
PHF3-202ENST00000393387 DNAH9Q9NYC9 4486 aa1.24□□□□□ -2.21
PHF3-202ENST00000393387 DSPP15924 2871 aaKnown RBP1.24□□□□□ -2.21
PHF3-202ENST00000393387 FBN1P35555 2871 aaKnown RBP1.24□□□□□ -2.21
PHF3-202ENST00000393387 CELSR3Q9NYQ7 3312 aa1.24□□□□□ -2.21
PHF3-202ENST00000393387 LCE3CQ5T5A8 94 aa1.24□□□□□ -2.21
PHF3-202ENST00000393387 LRBAP50851 2863 aa1.24□□□□□ -2.21
PHF3-202ENST00000393387 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
PHF3-202ENST00000393387 DCHS1Q96JQ0 3298 aa1.23□□□□□ -2.21
PHF3-202ENST00000393387 DNAH14Q0VDD8 3507 aa1.23□□□□□ -2.21
PHF3-202ENST00000393387 AKAP13Q12802 2813 aa1.23□□□□□ -2.21
PHF3-202ENST00000393387 PLECQ15149 4684 aaKnown RBP1.23□□□□□ -2.21
PHF3-202ENST00000393387 MUC3AQ02505 3323 aa1.23□□□□□ -2.21
PHF3-202ENST00000393387 LAMA1P25391 3075 aa1.23□□□□□ -2.21
PHF3-202ENST00000393387 ANK3Q12955 4377 aaKnown RBP1.22□□□□□ -2.21
PHF3-202ENST00000393387 ZNF469Q96JG9 3925 aaPredicted RBP1.22□□□□□ -2.21
PHF3-202ENST00000393387 UTP20O75691 2785 aaKnown RBP1.22□□□□□ -2.21
PHF3-202ENST00000393387 KALRNO60229 2985 aa1.22□□□□□ -2.21
PHF3-202ENST00000393387 FBN2P35556 2912 aa1.22□□□□□ -2.21
PHF3-202ENST00000393387 XIRP2A4UGR9 3374 aa1.21□□□□□ -2.22
PHF3-202ENST00000393387 TEP1Q99973 2627 aaKnown RBP1.21□□□□□ -2.22
PHF3-202ENST00000393387 NIPBLQ6KC79 2804 aaeCLIP1.21□□□□□ -2.225e-6■■□□□ 12.2
PHF3-202ENST00000393387 MT1HL1P0DM35 61 aa1.21□□□□□ -2.22
PHF3-202ENST00000393387 ZZEF1O43149 2961 aa1.21□□□□□ -2.22
PHF3-202ENST00000393387 HIVEP1P15822 2718 aa1.21□□□□□ -2.22
PHF3-202ENST00000393387 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
PHF3-202ENST00000393387 TEX15Q9BXT5 2789 aa1.2□□□□□ -2.22
PHF3-202ENST00000393387 FRYQ5TBA9 3013 aa1.2□□□□□ -2.22
PHF3-202ENST00000393387 DNAH5Q8TE73 4624 aa1.19□□□□□ -2.22
PHF3-202ENST00000393387 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
PHF3-202ENST00000393387 TENM2Q9NT68 2774 aa1.19□□□□□ -2.22
PHF3-202ENST00000393387 MT1GP13640 62 aa1.19□□□□□ -2.22
PHF3-202ENST00000393387 DNAH1Q9P2D7 4330 aa1.19□□□□□ -2.22
PHF3-202ENST00000393387 PRUNE2Q8WUY3 3088 aa1.18□□□□□ -2.22
PHF3-202ENST00000393387 DYNC1H1Q14204 4646 aaKnown RBP1.18□□□□□ -2.22
PHF3-202ENST00000393387 VPS13AQ96RL7 3174 aa1.18□□□□□ -2.22
PHF3-202ENST00000393387 CELSR2Q9HCU4 2923 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 PRM1P04553 51 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 FAT1Q14517 4588 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 CSMD1Q96PZ7 3565 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 STARD9Q9P2P6 4700 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 NEBP20929 6669 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 CRYBG3Q68DQ2 2970 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 MXRA5Q9NR99 2828 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 DMXL2Q8TDJ6 3036 aa1.17□□□□□ -2.22
PHF3-202ENST00000393387 KMT2AQ03164 3969 aa1.16□□□□□ -2.22
PHF3-202ENST00000393387 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
PHF3-202ENST00000393387 SACSQ9NZJ4 4579 aa1.16□□□□□ -2.22
PHF3-202ENST00000393387 DNAH2Q9P225 4427 aa1.16□□□□□ -2.22
PHF3-202ENST00000393387 DNAH6Q9C0G6 4158 aa1.16□□□□□ -2.22
PHF3-202ENST00000393387 SRRM2Q9UQ35 2752 aaKnown RBP1.16□□□□□ -2.22
PHF3-202ENST00000393387 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
PHF3-202ENST00000393387 OTOGQ6ZRI0 2925 aa1.16□□□□□ -2.22
PHF3-202ENST00000393387 LCE3EQ5T5B0 92 aa1.15□□□□□ -2.22
PHF3-202ENST00000393387 MYO15AQ9UKN7 3530 aa1.15□□□□□ -2.23
PHF3-202ENST00000393387 FAT2Q9NYQ8 4349 aa1.15□□□□□ -2.23
PHF3-202ENST00000393387 TENM3Q9P273 2699 aa1.15□□□□□ -2.23
PHF3-202ENST00000393387 COL12A1Q99715 3063 aa1.15□□□□□ -2.23
PHF3-202ENST00000393387 HSPG2P98160 4391 aa1.14□□□□□ -2.23
PHF3-202ENST00000393387 CUBNO60494 3623 aa1.14□□□□□ -2.23
PHF3-202ENST00000393387 ATMQ13315 3056 aa1.14□□□□□ -2.23
PHF3-202ENST00000393387 LCE3DQ9BYE3 92 aa1.14□□□□□ -2.23
PHF3-202ENST00000393387 CDH23Q9H251 3354 aa1.14□□□□□ -2.23
PHF3-202ENST00000393387 LAMA3Q16787 3333 aa1.14□□□□□ -2.23
PHF3-202ENST00000393387 LYSTQ99698 3801 aa1.13□□□□□ -2.23
PHF3-202ENST00000393387 LOC400499M0QZD8 3231 aa1.13□□□□□ -2.23
PHF3-202ENST00000393387 FRYLO94915 3013 aa1.13□□□□□ -2.23
PHF3-202ENST00000393387 ASPMQ8IZT6 3477 aa1.13□□□□□ -2.23
PHF3-202ENST00000393387 DCHS2Q6V1P9 2916 aa1.13□□□□□ -2.23
PHF3-202ENST00000393387 VPS13BQ7Z7G8 4022 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 DNAH7Q8WXX0 4024 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 TENM4Q6N022 2769 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 BRCA2P51587 3418 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 WDFY3Q8IZQ1 3526 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 DNAH8Q96JB1 4490 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 DMXL1Q9Y485 3027 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 NF1P21359 2839 aa1.12□□□□□ -2.23
PHF3-202ENST00000393387 SPRR2EP22531 72 aa1.11□□□□□ -2.23
PHF3-202ENST00000393387 SPRR2BP35325 72 aa1.11□□□□□ -2.23
PHF3-202ENST00000393387 SPRR2AP35326 72 aa1.11□□□□□ -2.23
PHF3-202ENST00000393387 SPEGQ15772 3267 aa1.11□□□□□ -2.23
PHF3-202ENST00000393387 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
PHF3-202ENST00000393387 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
PHF3-202ENST00000393387 MT1FP04733 61 aa1.1□□□□□ -2.23
PHF3-202ENST00000393387 MT1HP80294 61 aa1.1□□□□□ -2.23
PHF3-202ENST00000393387 CSMD2Q7Z408 3487 aa1.1□□□□□ -2.23
PHF3-202ENST00000393387 MT2AP02795 61 aa1.09□□□□□ -2.23
PHF3-202ENST00000393387 PDZD2O15018 2839 aa1.09□□□□□ -2.23
PHF3-202ENST00000393387 VCANP13611 3396 aa1.09□□□□□ -2.23
PHF3-202ENST00000393387 AKAP9Q99996 3911 aa1.09□□□□□ -2.23
PHF3-202ENST00000393387 ITPR2Q14571 2701 aa1.09□□□□□ -2.23
PHF3-202ENST00000393387 COL7A1Q02388 2944 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms