RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
MKS1-203ENST00000393120 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
MKS1-203ENST00000393120 A6NN06 94 aa7.37□□□□□ -1.23
MKS1-203ENST00000393120 EPPK1P58107 5090 aaKnown RBP7.33□□□□□ -1.24
MKS1-203ENST00000393120 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
MKS1-203ENST00000393120 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
MKS1-203ENST00000393120 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
MKS1-203ENST00000393120 A0A1B0GU33 70 aa7.25□□□□□ -1.25
MKS1-203ENST00000393120 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
MKS1-203ENST00000393120 S4R3F8 94 aa7.23□□□□□ -1.25
MKS1-203ENST00000393120 H0YAA0 97 aa7.2□□□□□ -1.26
MKS1-203ENST00000393120 H3BS24 57 aa7.2□□□□□ -1.26
MKS1-203ENST00000393120 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
MKS1-203ENST00000393120 J3QL48 77 aa7.12□□□□□ -1.27
MKS1-203ENST00000393120 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
MKS1-203ENST00000393120 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
MKS1-203ENST00000393120 ABCA13Q86UQ4 5058 aa7.08□□□□□ -1.28
MKS1-203ENST00000393120 LRP2P98164 4655 aa7.06□□□□□ -1.28
MKS1-203ENST00000393120 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
MKS1-203ENST00000393120 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
MKS1-203ENST00000393120 P0C880 135 aa6.99□□□□□ -1.29
MKS1-203ENST00000393120 LPAP08519 4548 aa6.99□□□□□ -1.29
MKS1-203ENST00000393120 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
MKS1-203ENST00000393120 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
MKS1-203ENST00000393120 K7ERS5 55 aa6.96□□□□□ -1.3
MKS1-203ENST00000393120 HERC2O95714 4834 aa6.96□□□□□ -1.3
MKS1-203ENST00000393120 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
MKS1-203ENST00000393120 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
MKS1-203ENST00000393120 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
MKS1-203ENST00000393120 M0QZ58 72 aa6.86□□□□□ -1.31
MKS1-203ENST00000393120 A0A0D9SG42 100 aa6.85□□□□□ -1.31
MKS1-203ENST00000393120 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
MKS1-203ENST00000393120 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
MKS1-203ENST00000393120 ROMO1P60602 79 aa6.76□□□□□ -1.33
MKS1-203ENST00000393120 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
MKS1-203ENST00000393120 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
MKS1-203ENST00000393120 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
MKS1-203ENST00000393120 R4GN34 69 aa6.68□□□□□ -1.34
MKS1-203ENST00000393120 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
MKS1-203ENST00000393120 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
MKS1-203ENST00000393120 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
MKS1-203ENST00000393120 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
MKS1-203ENST00000393120 HERC1Q15751 4861 aa6.55□□□□□ -1.36
MKS1-203ENST00000393120 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
MKS1-203ENST00000393120 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
MKS1-203ENST00000393120 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
MKS1-203ENST00000393120 MUC2Q02817 5179 aa6.5□□□□□ -1.37
MKS1-203ENST00000393120 A0A0A0MQY5 61 aa6.46□□□□□ -1.38
MKS1-203ENST00000393120 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
MKS1-203ENST00000393120 MT1HP80294 61 aa6.35□□□□□ -1.39
MKS1-203ENST00000393120 M0R2T5 61 aa6.29□□□□□ -1.4
MKS1-203ENST00000393120 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
MKS1-203ENST00000393120 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
MKS1-203ENST00000393120 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
MKS1-203ENST00000393120 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
MKS1-203ENST00000393120 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
MKS1-203ENST00000393120 MT2AP02795 61 aa6.19□□□□□ -1.42
MKS1-203ENST00000393120 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
MKS1-203ENST00000393120 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
MKS1-203ENST00000393120 MT1FP04733 61 aa6.16□□□□□ -1.42
MKS1-203ENST00000393120 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
MKS1-203ENST00000393120 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
MKS1-203ENST00000393120 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
MKS1-203ENST00000393120 TNP1P09430 55 aa6.07□□□□□ -1.44
MKS1-203ENST00000393120 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
MKS1-203ENST00000393120 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
MKS1-203ENST00000393120 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
MKS1-203ENST00000393120 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
MKS1-203ENST00000393120 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
MKS1-203ENST00000393120 MT1BP07438 61 aa5.93□□□□□ -1.46
MKS1-203ENST00000393120 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
MKS1-203ENST00000393120 KRTAP10-5P60370 271 aa5.84□□□□□ -1.48
MKS1-203ENST00000393120 LCE2AQ5TA79 106 aaPredicted RBP5.83□□□□□ -1.48
MKS1-203ENST00000393120 MT1XP80297 61 aa5.82□□□□□ -1.48
MKS1-203ENST00000393120 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
MKS1-203ENST00000393120 LCE2BO14633 110 aa5.7□□□□□ -1.5
MKS1-203ENST00000393120 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
MKS1-203ENST00000393120 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
MKS1-203ENST00000393120 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
MKS1-203ENST00000393120 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
MKS1-203ENST00000393120 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
MKS1-203ENST00000393120 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
MKS1-203ENST00000393120 USH2AO75445 5202 aa5.39□□□□□ -1.55
MKS1-203ENST00000393120 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
MKS1-203ENST00000393120 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
MKS1-203ENST00000393120 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
MKS1-203ENST00000393120 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
MKS1-203ENST00000393120 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
MKS1-203ENST00000393120 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
MKS1-203ENST00000393120 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
MKS1-203ENST00000393120 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
MKS1-203ENST00000393120 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
MKS1-203ENST00000393120 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
MKS1-203ENST00000393120 KMT2DO14686 5537 aa5.12□□□□□ -1.59
MKS1-203ENST00000393120 MT1EP04732 61 aa5.07□□□□□ -1.6
MKS1-203ENST00000393120 INE1O15225 51 aa5.04□□□□□ -1.6
MKS1-203ENST00000393120 MT1LQ93083 61 aa5.03□□□□□ -1.6
MKS1-203ENST00000393120 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
MKS1-203ENST00000393120 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
MKS1-203ENST00000393120 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms