RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MIR22HGQ0VDD5 57 aa13.2□□□□□ -0.3
SMARCD3-203ENST00000392811 A6NN06 94 aa13.18□□□□□ -0.3
SMARCD3-203ENST00000392811 TPRXLQ17RH7 258 aa13.14□□□□□ -0.31
SMARCD3-203ENST00000392811 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
SMARCD3-203ENST00000392811 LRP2P98164 4655 aa12.98□□□□□ -0.33
SMARCD3-203ENST00000392811 ABCA13Q86UQ4 5058 aa12.97□□□□□ -0.33
SMARCD3-203ENST00000392811 KTN1-AS1Q86SY8 53 aa12.96□□□□□ -0.33
SMARCD3-203ENST00000392811 A0A1B0GU33 70 aa12.96□□□□□ -0.34
SMARCD3-203ENST00000392811 H1FX-AS1Q4G0G2 97 aa12.94□□□□□ -0.34
SMARCD3-203ENST00000392811 S4R3F8 94 aa12.94□□□□□ -0.34
SMARCD3-203ENST00000392811 H0YAA0 97 aa12.93□□□□□ -0.34
SMARCD3-203ENST00000392811 LPAP08519 4548 aa12.91□□□□□ -0.34
SMARCD3-203ENST00000392811 J3QL48 77 aa12.79□□□□□ -0.36
SMARCD3-203ENST00000392811 KRTAP10-6P60371 365 aaPredicted RBP12.76□□□□□ -0.37
SMARCD3-203ENST00000392811 RBM12B-AS1Q9P1G2 102 aa12.76□□□□□ -0.37
SMARCD3-203ENST00000392811 KRTAP3-2Q9BYR7 98 aa12.72□□□□□ -0.37
SMARCD3-203ENST00000392811 HERC2O95714 4834 aa12.72□□□□□ -0.37
SMARCD3-203ENST00000392811 SEC61BP60468 96 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-203ENST00000392811 BIRC6Q9NR09 4857 aa12.63□□□□□ -0.39
SMARCD3-203ENST00000392811 P0C880 135 aa12.57□□□□□ -0.4
SMARCD3-203ENST00000392811 ADM2Q7Z4H4 148 aa12.56□□□□□ -0.4
SMARCD3-203ENST00000392811 KRTAP13-4Q3LI77 160 aa12.55□□□□□ -0.4
SMARCD3-203ENST00000392811 CSAG1Q6PB30 78 aa12.54□□□□□ -0.4
SMARCD3-203ENST00000392811 PRAC1Q96KF2 57 aa12.52□□□□□ -0.4
SMARCD3-203ENST00000392811 KRTAP4-1Q9BYQ7 146 aa12.49□□□□□ -0.41
SMARCD3-203ENST00000392811 MUC17Q685J3 4493 aa12.48□□□□□ -0.41
SMARCD3-203ENST00000392811 K7ERS5 55 aa12.4□□□□□ -0.42
SMARCD3-203ENST00000392811 A0A0D9SG42 100 aa12.38□□□□□ -0.43
SMARCD3-203ENST00000392811 KRTAP19-2Q3LHN2 52 aa12.23□□□□□ -0.45
SMARCD3-203ENST00000392811 M0QZ58 72 aa12.17□□□□□ -0.46
SMARCD3-203ENST00000392811 PCLOQ9Y6V0 5065 aa12.13□□□□□ -0.47
SMARCD3-203ENST00000392811 KRTAP12-2P59991 146 aa12.1□□□□□ -0.47
SMARCD3-203ENST00000392811 HERC1Q15751 4861 aa12.07□□□□□ -0.48
SMARCD3-203ENST00000392811 ROMO1P60602 79 aa12.06□□□□□ -0.48
SMARCD3-203ENST00000392811 KRTAP12-1P59990 96 aa12.06□□□□□ -0.48
SMARCD3-203ENST00000392811 HMCN2Q8NDA2 5059 aa12.02□□□□□ -0.48
SMARCD3-203ENST00000392811 SPINT4Q6UDR6 99 aa12.01□□□□□ -0.49
SMARCD3-203ENST00000392811 MUC2Q02817 5179 aa11.97□□□□□ -0.49
SMARCD3-203ENST00000392811 R4GN34 69 aa11.97□□□□□ -0.49
SMARCD3-203ENST00000392811 KRTAP25-1Q3LHN0 102 aa11.96□□□□□ -0.49
SMARCD3-203ENST00000392811 LORP23490 312 aaPredicted RBP11.93□□□□□ -0.5
SMARCD3-203ENST00000392811 LINC01554Q52M75 96 aa11.93□□□□□ -0.5
SMARCD3-203ENST00000392811 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
SMARCD3-203ENST00000392811 FLGP20930 4061 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-203ENST00000392811 LCE2CQ5TA81 110 aa11.67□□□□□ -0.54
SMARCD3-203ENST00000392811 C10orf95Q9H7T3 257 aa11.59□□□□□ -0.55
SMARCD3-203ENST00000392811 FAT4Q6V0I7 4981 aa11.46□□□□□ -0.57
SMARCD3-203ENST00000392811 RNF213Q63HN8 5207 aa11.45□□□□□ -0.58
SMARCD3-203ENST00000392811 UBR4Q5T4S7 5183 aa11.43□□□□□ -0.58
SMARCD3-203ENST00000392811 MT1HP80294 61 aa11.37□□□□□ -0.59
SMARCD3-203ENST00000392811 M0R2T5 61 aa11.34□□□□□ -0.59
SMARCD3-203ENST00000392811 CAMK2N1Q7Z7J9 78 aa11.3□□□□□ -0.6
SMARCD3-203ENST00000392811 SPRR2GQ9BYE4 73 aa11.16□□□□□ -0.62
SMARCD3-203ENST00000392811 KRTAP19-1Q8IUB9 90 aa11.13□□□□□ -0.63
SMARCD3-203ENST00000392811 MT2AP02795 61 aa11.1□□□□□ -0.63
SMARCD3-203ENST00000392811 MT1FP04733 61 aa11.08□□□□□ -0.64
SMARCD3-203ENST00000392811 KRTAP9-8Q9BYQ0 159 aa11.06□□□□□ -0.64
SMARCD3-203ENST00000392811 KRTAP10-10P60014 251 aa11.04□□□□□ -0.64
SMARCD3-203ENST00000392811 PLAC4Q8WY50 150 aa10.94□□□□□ -0.66
SMARCD3-203ENST00000392811 PP632Q6XCG6 107 aa10.84□□□□□ -0.67
SMARCD3-203ENST00000392811 TNP1P09430 55 aa10.84□□□□□ -0.67
SMARCD3-203ENST00000392811 KRTAP15-1Q3LI76 137 aa10.8□□□□□ -0.68
SMARCD3-203ENST00000392811 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
SMARCD3-203ENST00000392811 KRTAP23-1A1A580 65 aa10.62□□□□□ -0.71
SMARCD3-203ENST00000392811 MT1BP07438 61 aa10.62□□□□□ -0.71
SMARCD3-203ENST00000392811 KRTAP9-3Q9BYQ3 159 aa10.62□□□□□ -0.71
SMARCD3-203ENST00000392811 KRTAP10-5P60370 271 aa10.44□□□□□ -0.74
SMARCD3-203ENST00000392811 MT1XP80297 61 aa10.43□□□□□ -0.74
SMARCD3-203ENST00000392811 LCE2AQ5TA79 106 aaPredicted RBP10.4□□□□□ -0.75
SMARCD3-203ENST00000392811 LCE3AQ5TA76 89 aa10.33□□□□□ -0.76
SMARCD3-203ENST00000392811 NDUFAF8A1L188 74 aa10.31□□□□□ -0.76
SMARCD3-203ENST00000392811 LCE2BO14633 110 aa10.25□□□□□ -0.77
SMARCD3-203ENST00000392811 H3BS24 57 aa10.19□□□□□ -0.78
SMARCD3-203ENST00000392811 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
SMARCD3-203ENST00000392811 KRTAP10-7P60409 375 aaPredicted RBP10.09□□□□□ -0.79
SMARCD3-203ENST00000392811 KRTAP10-12P60413 245 aa10.09□□□□□ -0.79
SMARCD3-203ENST00000392811 KRTAP8-1Q8IUC2 63 aa10.09□□□□□ -0.79
SMARCD3-203ENST00000392811 SPRR5A0A1B0GTR4 108 aa9.95□□□□□ -0.82
SMARCD3-203ENST00000392811 LUZP6Q538Z0 58 aa9.93□□□□□ -0.82
SMARCD3-203ENST00000392811 USH2AO75445 5202 aa9.89□□□□□ -0.83
SMARCD3-203ENST00000392811 KRTAP12-3P60328 96 aa9.86□□□□□ -0.83
SMARCD3-203ENST00000392811 KRTAP19-5Q3LI72 72 aa9.6□□□□□ -0.87
SMARCD3-203ENST00000392811 KRTAP4-8A0A0G2JLE6 195 aa9.56□□□□□ -0.88
SMARCD3-203ENST00000392811 KRTAP4-8Q9BYQ9 185 aa9.56□□□□□ -0.88
SMARCD3-203ENST00000392811 KMT2DO14686 5537 aa9.5□□□□□ -0.89
SMARCD3-203ENST00000392811 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
SMARCD3-203ENST00000392811 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
SMARCD3-203ENST00000392811 KRTAP19-7Q3SYF9 63 aa9.31□□□□□ -0.92
SMARCD3-203ENST00000392811 LCE3CQ5T5A8 94 aa9.26□□□□□ -0.93
SMARCD3-203ENST00000392811 FSIP2Q5CZC0 6907 aa9.15□□□□□ -0.94
SMARCD3-203ENST00000392811 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
SMARCD3-203ENST00000392811 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
SMARCD3-203ENST00000392811 MT1EP04732 61 aa9.07□□□□□ -0.96
SMARCD3-203ENST00000392811 MT1LQ93083 61 aa9□□□□□ -0.97
SMARCD3-203ENST00000392811 KRTAP4-7Q9BYR0 210 aa8.94□□□□□ -0.98
SMARCD3-203ENST00000392811 KRTAP19-4Q3LI73 84 aa8.93□□□□□ -0.98
SMARCD3-203ENST00000392811 KRTAP9-6A8MVA2 160 aa8.88□□□□□ -0.99
SMARCD3-203ENST00000392811 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
SMARCD3-203ENST00000392811 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
SMARCD3-203ENST00000392811 MUC12Q9UKN1 5478 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms