RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 DMBT1Q9UGM3 2413 aaPredicted RBP10.13□□□□□ -0.79
TUBA4A-202ENST00000392088 KRTAP13-4Q3LI77 160 aa10.08□□□□□ -0.8
TUBA4A-202ENST00000392088 K7ERS5 55 aa10.08□□□□□ -0.8
TUBA4A-202ENST00000392088 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
TUBA4A-202ENST00000392088 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
TUBA4A-202ENST00000392088 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
TUBA4A-202ENST00000392088 RPL37P61927 97 aaKnown RBP10.04□□□□□ -0.8
TUBA4A-202ENST00000392088 KMT2CQ8NEZ4 4911 aaKnown RBP10.03□□□□□ -0.8
TUBA4A-202ENST00000392088 XP32Q5T750 250 aa9.99□□□□□ -0.81
TUBA4A-202ENST00000392088 A0A0D9SG42 100 aa9.99□□□□□ -0.81
TUBA4A-202ENST00000392088 KRTAP21-3Q3LHN1 58 aa9.97□□□□□ -0.81
TUBA4A-202ENST00000392088 ROMO1P60602 79 aa9.96□□□□□ -0.82
TUBA4A-202ENST00000392088 S4R3F8 94 aa9.96□□□□□ -0.82
TUBA4A-202ENST00000392088 P0C880 135 aa9.92□□□□□ -0.82
TUBA4A-202ENST00000392088 Q5VSD8 79 aa9.9□□□□□ -0.82
TUBA4A-202ENST00000392088 KRTAP17-1Q9BYP8 105 aa9.84□□□□□ -0.83
TUBA4A-202ENST00000392088 H3BS24 57 aa9.84□□□□□ -0.83
TUBA4A-202ENST00000392088 LPAP08519 4548 aa9.82□□□□□ -0.84
TUBA4A-202ENST00000392088 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
TUBA4A-202ENST00000392088 RYR1P21817 5038 aa9.79□□□□□ -0.84
TUBA4A-202ENST00000392088 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
TUBA4A-202ENST00000392088 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
TUBA4A-202ENST00000392088 MT1HL1P0DM35 61 aa9.71□□□□□ -0.85
TUBA4A-202ENST00000392088 LRP2P98164 4655 aa9.7□□□□□ -0.86
TUBA4A-202ENST00000392088 RYR3Q15413 4870 aa9.67□□□□□ -0.86
TUBA4A-202ENST00000392088 KRTAP12-1P59990 96 aa9.64□□□□□ -0.87
TUBA4A-202ENST00000392088 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
TUBA4A-202ENST00000392088 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
TUBA4A-202ENST00000392088 M0QZ58 72 aa9.48□□□□□ -0.89
TUBA4A-202ENST00000392088 ABCA13Q86UQ4 5058 aa9.39□□□□□ -0.91
TUBA4A-202ENST00000392088 KRTAP15-1Q3LI76 137 aa9.38□□□□□ -0.91
TUBA4A-202ENST00000392088 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
TUBA4A-202ENST00000392088 MUC17Q685J3 4493 aa9.29□□□□□ -0.92
TUBA4A-202ENST00000392088 R4GN34 69 aa9.25□□□□□ -0.93
TUBA4A-202ENST00000392088 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
TUBA4A-202ENST00000392088 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
TUBA4A-202ENST00000392088 NDUFAF8A1L188 74 aa9.21□□□□□ -0.94
TUBA4A-202ENST00000392088 KRTAP4-1Q9BYQ7 146 aa9.16□□□□□ -0.94
TUBA4A-202ENST00000392088 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
TUBA4A-202ENST00000392088 KRTAP19-2Q3LHN2 52 aa8.99□□□□□ -0.97
TUBA4A-202ENST00000392088 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
TUBA4A-202ENST00000392088 J3QL48 77 aa8.82□□□□□ -1
TUBA4A-202ENST00000392088 HERC2O95714 4834 aa8.82□□□□□ -1
TUBA4A-202ENST00000392088 CAMK2N1Q7Z7J9 78 aa8.8□□□□□ -1
TUBA4A-202ENST00000392088 MUC2Q02817 5179 aa8.79□□□□□ -1
TUBA4A-202ENST00000392088 FLGP20930 4061 aaPredicted RBP8.74□□□□□ -1.01
TUBA4A-202ENST00000392088 PP632Q6XCG6 107 aa8.68□□□□□ -1.02
TUBA4A-202ENST00000392088 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.02
TUBA4A-202ENST00000392088 HERC1Q15751 4861 aa8.61□□□□□ -1.03
TUBA4A-202ENST00000392088 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
TUBA4A-202ENST00000392088 TNP1P09430 55 aa8.48□□□□□ -1.05
TUBA4A-202ENST00000392088 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
TUBA4A-202ENST00000392088 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
TUBA4A-202ENST00000392088 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
TUBA4A-202ENST00000392088 HMCN2Q8NDA2 5059 aa8.35□□□□□ -1.07
TUBA4A-202ENST00000392088 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
TUBA4A-202ENST00000392088 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
TUBA4A-202ENST00000392088 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
TUBA4A-202ENST00000392088 SPRR5A0A1B0GTR4 108 aa8.24□□□□□ -1.09
TUBA4A-202ENST00000392088 M0R2T5 61 aa8.12□□□□□ -1.11
TUBA4A-202ENST00000392088 MT1HP80294 61 aa8.1□□□□□ -1.11
TUBA4A-202ENST00000392088 A0A0A0MQY5 61 aa8.09□□□□□ -1.11
TUBA4A-202ENST00000392088 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
TUBA4A-202ENST00000392088 MT1FP04733 61 aa8.06□□□□□ -1.12
TUBA4A-202ENST00000392088 MT2AP02795 61 aa8.03□□□□□ -1.12
TUBA4A-202ENST00000392088 RNF213Q63HN8 5207 aa8.03□□□□□ -1.12
TUBA4A-202ENST00000392088 UBR4Q5T4S7 5183 aa8.01□□□□□ -1.13
TUBA4A-202ENST00000392088 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
TUBA4A-202ENST00000392088 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
TUBA4A-202ENST00000392088 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
TUBA4A-202ENST00000392088 KRTAP8-1Q8IUC2 63 aa7.84□□□□□ -1.16
TUBA4A-202ENST00000392088 MT1BP07438 61 aa7.83□□□□□ -1.16
TUBA4A-202ENST00000392088 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
TUBA4A-202ENST00000392088 MT1XP80297 61 aa7.81□□□□□ -1.16
TUBA4A-202ENST00000392088 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
TUBA4A-202ENST00000392088 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
TUBA4A-202ENST00000392088 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
TUBA4A-202ENST00000392088 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
TUBA4A-202ENST00000392088 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
TUBA4A-202ENST00000392088 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
TUBA4A-202ENST00000392088 LCE2BO14633 110 aa7.31□□□□□ -1.24
TUBA4A-202ENST00000392088 INE1O15225 51 aa7.3□□□□□ -1.24
TUBA4A-202ENST00000392088 KMT2DO14686 5537 aa7.27□□□□□ -1.25
TUBA4A-202ENST00000392088 USH2AO75445 5202 aa7.25□□□□□ -1.25
TUBA4A-202ENST00000392088 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
TUBA4A-202ENST00000392088 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
TUBA4A-202ENST00000392088 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
TUBA4A-202ENST00000392088 KRTAP9-6A8MVA2 160 aa7.06□□□□□ -1.28
TUBA4A-202ENST00000392088 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
TUBA4A-202ENST00000392088 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.29
TUBA4A-202ENST00000392088 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
TUBA4A-202ENST00000392088 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
TUBA4A-202ENST00000392088 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
TUBA4A-202ENST00000392088 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
TUBA4A-202ENST00000392088 MT1LQ93083 61 aa6.75□□□□□ -1.33
TUBA4A-202ENST00000392088 MT1EP04732 61 aa6.73□□□□□ -1.33
TUBA4A-202ENST00000392088 SSPOA2VEC9 5147 aa6.68□□□□□ -1.34
TUBA4A-202ENST00000392088 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
TUBA4A-202ENST00000392088 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
TUBA4A-202ENST00000392088 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms