RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 VPS13BQ7Z7G8 4022 aa2.49□□□□□ -2.01
TRAJ4-201ENST00000390533 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
TRAJ4-201ENST00000390533 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
TRAJ4-201ENST00000390533 LRP1BQ9NZR2 4599 aa2.47□□□□□ -2.01
TRAJ4-201ENST00000390533 KRTAP10-4P60372 401 aaPredicted RBP2.45□□□□□ -2.02
TRAJ4-201ENST00000390533 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
TRAJ4-201ENST00000390533 PLAC4Q8WY50 150 aa2.43□□□□□ -2.02
TRAJ4-201ENST00000390533 KRTAP10-8P60410 259 aa2.42□□□□□ -2.02
TRAJ4-201ENST00000390533 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
TRAJ4-201ENST00000390533 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
TRAJ4-201ENST00000390533 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
TRAJ4-201ENST00000390533 PKD1P98161 4303 aa2.38□□□□□ -2.03
TRAJ4-201ENST00000390533 TNXBP22105 4242 aa2.37□□□□□ -2.03
TRAJ4-201ENST00000390533 APOBP04114 4563 aaKnown RBP2.37□□□□□ -2.03
TRAJ4-201ENST00000390533 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
TRAJ4-201ENST00000390533 A0A1B0GVY2 172 aa2.36□□□□□ -2.03
TRAJ4-201ENST00000390533 SMR3BP02814 79 aaPredicted RBP2.36□□□□□ -2.03
TRAJ4-201ENST00000390533 KRTAP23-1A1A580 65 aa2.34□□□□□ -2.03
TRAJ4-201ENST00000390533 R4GN34 69 aa2.32□□□□□ -2.04
TRAJ4-201ENST00000390533 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
TRAJ4-201ENST00000390533 SEC61BP60468 96 aaKnown RBP2.31□□□□□ -2.04
TRAJ4-201ENST00000390533 DYNC1H1Q14204 4646 aaKnown RBP2.3□□□□□ -2.04
TRAJ4-201ENST00000390533 FAT1Q14517 4588 aa2.3□□□□□ -2.04
TRAJ4-201ENST00000390533 HSPG2P98160 4391 aa2.3□□□□□ -2.04
TRAJ4-201ENST00000390533 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
TRAJ4-201ENST00000390533 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
TRAJ4-201ENST00000390533 HYDINQ4G0P3 5121 aa2.24□□□□□ -2.05
TRAJ4-201ENST00000390533 MT1HL1P0DM35 61 aa2.23□□□□□ -2.05
TRAJ4-201ENST00000390533 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
TRAJ4-201ENST00000390533 Q5VSD8 79 aa2.22□□□□□ -2.05
TRAJ4-201ENST00000390533 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
TRAJ4-201ENST00000390533 TNP1P09430 55 aa2.21□□□□□ -2.06
TRAJ4-201ENST00000390533 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
TRAJ4-201ENST00000390533 INE1O15225 51 aa2.19□□□□□ -2.06
TRAJ4-201ENST00000390533 KRTAP21-3Q3LHN1 58 aa2.18□□□□□ -2.06
TRAJ4-201ENST00000390533 DNHD1Q96M86 4753 aa2.17□□□□□ -2.06
TRAJ4-201ENST00000390533 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
TRAJ4-201ENST00000390533 RYR2Q92736 4967 aa2.09□□□□□ -2.07
TRAJ4-201ENST00000390533 LRP2P98164 4655 aa2.08□□□□□ -2.08
TRAJ4-201ENST00000390533 KRTAP17-1Q9BYP8 105 aa2.08□□□□□ -2.08
TRAJ4-201ENST00000390533 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
TRAJ4-201ENST00000390533 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
TRAJ4-201ENST00000390533 RYR1P21817 5038 aa2.06□□□□□ -2.08
TRAJ4-201ENST00000390533 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
TRAJ4-201ENST00000390533 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
TRAJ4-201ENST00000390533 KMT2CQ8NEZ4 4911 aaKnown RBP2.05□□□□□ -2.08
TRAJ4-201ENST00000390533 HERC1Q15751 4861 aa2.04□□□□□ -2.08
TRAJ4-201ENST00000390533 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
TRAJ4-201ENST00000390533 LPAP08519 4548 aa2.03□□□□□ -2.09
TRAJ4-201ENST00000390533 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
TRAJ4-201ENST00000390533 KRTAP19-1Q8IUB9 90 aa1.98□□□□□ -2.09
TRAJ4-201ENST00000390533 KRTAP10-12P60413 245 aa1.96□□□□□ -2.1
TRAJ4-201ENST00000390533 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
TRAJ4-201ENST00000390533 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
TRAJ4-201ENST00000390533 J3QL48 77 aa1.93□□□□□ -2.1
TRAJ4-201ENST00000390533 KIAA1109Q2LD37 5005 aa1.92□□□□□ -2.1
TRAJ4-201ENST00000390533 RYR3Q15413 4870 aa1.92□□□□□ -2.1
TRAJ4-201ENST00000390533 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
TRAJ4-201ENST00000390533 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
TRAJ4-201ENST00000390533 LCE2CQ5TA81 110 aa1.91□□□□□ -2.1
TRAJ4-201ENST00000390533 KRTAP4-5Q9BYR2 181 aa1.91□□□□□ -2.1
TRAJ4-201ENST00000390533 MT1XP80297 61 aa1.88□□□□□ -2.11
TRAJ4-201ENST00000390533 KRTAP19-4Q3LI73 84 aa1.88□□□□□ -2.11
TRAJ4-201ENST00000390533 MT2AP02795 61 aa1.86□□□□□ -2.11
TRAJ4-201ENST00000390533 MT1BP07438 61 aa1.86□□□□□ -2.11
TRAJ4-201ENST00000390533 MT1FP04733 61 aa1.85□□□□□ -2.11
TRAJ4-201ENST00000390533 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
TRAJ4-201ENST00000390533 BIRC6Q9NR09 4857 aa1.85□□□□□ -2.11
TRAJ4-201ENST00000390533 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.11
TRAJ4-201ENST00000390533 KRTAP9-8Q9BYQ0 159 aa1.84□□□□□ -2.11
TRAJ4-201ENST00000390533 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.11
TRAJ4-201ENST00000390533 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
TRAJ4-201ENST00000390533 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.12
TRAJ4-201ENST00000390533 MT1HP80294 61 aa1.83□□□□□ -2.12
TRAJ4-201ENST00000390533 M0R2T5 61 aa1.81□□□□□ -2.12
TRAJ4-201ENST00000390533 KRTAP10-7P60409 375 aaPredicted RBP1.81□□□□□ -2.12
TRAJ4-201ENST00000390533 HERC2O95714 4834 aa1.79□□□□□ -2.12
TRAJ4-201ENST00000390533 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
TRAJ4-201ENST00000390533 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
TRAJ4-201ENST00000390533 KRTAP9-3Q9BYQ3 159 aa1.77□□□□□ -2.13
TRAJ4-201ENST00000390533 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
TRAJ4-201ENST00000390533 PCLOQ9Y6V0 5065 aa1.73□□□□□ -2.13
TRAJ4-201ENST00000390533 EPPK1P58107 5090 aaKnown RBP1.7□□□□□ -2.14
TRAJ4-201ENST00000390533 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
TRAJ4-201ENST00000390533 UBR4Q5T4S7 5183 aa1.68□□□□□ -2.14
TRAJ4-201ENST00000390533 MUC2Q02817 5179 aa1.67□□□□□ -2.14
TRAJ4-201ENST00000390533 MT1LQ93083 61 aa1.66□□□□□ -2.14
TRAJ4-201ENST00000390533 MT1EP04732 61 aa1.65□□□□□ -2.15
TRAJ4-201ENST00000390533 LCE2BO14633 110 aa1.62□□□□□ -2.15
TRAJ4-201ENST00000390533 RNF213Q63HN8 5207 aa1.61□□□□□ -2.15
TRAJ4-201ENST00000390533 KRTAP4-8A0A0G2JLE6 195 aa1.61□□□□□ -2.15
TRAJ4-201ENST00000390533 KRTAP4-8Q9BYQ9 185 aa1.61□□□□□ -2.15
TRAJ4-201ENST00000390533 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
TRAJ4-201ENST00000390533 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
TRAJ4-201ENST00000390533 KRTAP4-7Q9BYR0 210 aa1.6□□□□□ -2.15
TRAJ4-201ENST00000390533 MT1AP04731 61 aa1.55□□□□□ -2.16
TRAJ4-201ENST00000390533 MT1GP13640 62 aa1.52□□□□□ -2.17
TRAJ4-201ENST00000390533 MT1MQ8N339 61 aa1.51□□□□□ -2.17
TRAJ4-201ENST00000390533 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
TRAJ4-201ENST00000390533 LOC100996750A0A140TA64 210 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms