RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 DNAH11Q96DT5 4516 aa4.5□□□□□ -1.69
PKP4-201ENST00000389757 PLECQ15149 4684 aaKnown RBP4.48□□□□□ -1.69
PKP4-201ENST00000389757 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.69
PKP4-201ENST00000389757 DNAH10Q8IVF4 4471 aa4.45□□□□□ -1.7
PKP4-201ENST00000389757 LORP23490 312 aaPredicted RBP4.4□□□□□ -1.71
PKP4-201ENST00000389757 KRTAP4-1Q9BYQ7 146 aa4.4□□□□□ -1.71
PKP4-201ENST00000389757 DYNC1H1Q14204 4646 aaKnown RBP4.39□□□□□ -1.71
PKP4-201ENST00000389757 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
PKP4-201ENST00000389757 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
PKP4-201ENST00000389757 MT1HP80294 61 aa4.36□□□□□ -1.71
PKP4-201ENST00000389757 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
PKP4-201ENST00000389757 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
PKP4-201ENST00000389757 DNAH17Q9UFH2 4485 aa4.34□□□□□ -1.71
PKP4-201ENST00000389757 RYR1P21817 5038 aa4.32□□□□□ -1.72
PKP4-201ENST00000389757 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
PKP4-201ENST00000389757 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
PKP4-201ENST00000389757 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
PKP4-201ENST00000389757 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
PKP4-201ENST00000389757 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
PKP4-201ENST00000389757 MT2AP02795 61 aa4.27□□□□□ -1.73
PKP4-201ENST00000389757 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
PKP4-201ENST00000389757 FAT1Q14517 4588 aa4.27□□□□□ -1.73
PKP4-201ENST00000389757 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
PKP4-201ENST00000389757 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
PKP4-201ENST00000389757 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
PKP4-201ENST00000389757 ANK2Q01484 3957 aa4.21□□□□□ -1.74
PKP4-201ENST00000389757 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
PKP4-201ENST00000389757 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
PKP4-201ENST00000389757 MT1FP04733 61 aa4.17□□□□□ -1.74
PKP4-201ENST00000389757 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.75
PKP4-201ENST00000389757 RYR3Q15413 4870 aa4.15□□□□□ -1.75
PKP4-201ENST00000389757 KIAA1109Q2LD37 5005 aa4.14□□□□□ -1.75
PKP4-201ENST00000389757 KRTAP17-1Q9BYP8 105 aa4.13□□□□□ -1.75
PKP4-201ENST00000389757 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
PKP4-201ENST00000389757 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
PKP4-201ENST00000389757 INE1O15225 51 aa4.05□□□□□ -1.76
PKP4-201ENST00000389757 KMT2AQ03164 3969 aa4.04□□□□□ -1.76
PKP4-201ENST00000389757 RYR2Q92736 4967 aa4.04□□□□□ -1.76
PKP4-201ENST00000389757 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
PKP4-201ENST00000389757 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
PKP4-201ENST00000389757 BIRC6Q9NR09 4857 aa4.01□□□□□ -1.77
PKP4-201ENST00000389757 DNAH6Q9C0G6 4158 aa4.01□□□□□ -1.77
PKP4-201ENST00000389757 LYSTQ99698 3801 aa3.97□□□□□ -1.77
PKP4-201ENST00000389757 FAT3Q8TDW7 4589 aa3.96□□□□□ -1.78
PKP4-201ENST00000389757 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
PKP4-201ENST00000389757 HERC2O95714 4834 aa3.95□□□□□ -1.78
PKP4-201ENST00000389757 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
PKP4-201ENST00000389757 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
PKP4-201ENST00000389757 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
PKP4-201ENST00000389757 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
PKP4-201ENST00000389757 MYCBP2O75592 4640 aa3.91□□□□□ -1.78
PKP4-201ENST00000389757 CMYA5Q8N3K9 4069 aa3.9□□□□□ -1.78
PKP4-201ENST00000389757 DNAH7Q8WXX0 4024 aa3.89□□□□□ -1.79
PKP4-201ENST00000389757 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
PKP4-201ENST00000389757 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
PKP4-201ENST00000389757 HERC1Q15751 4861 aa3.86□□□□□ -1.79
PKP4-201ENST00000389757 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
PKP4-201ENST00000389757 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
PKP4-201ENST00000389757 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
PKP4-201ENST00000389757 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
PKP4-201ENST00000389757 HSPG2P98160 4391 aa3.81□□□□□ -1.8
PKP4-201ENST00000389757 SPRR2EP22531 72 aa3.8□□□□□ -1.8
PKP4-201ENST00000389757 SPRR2BP35325 72 aa3.8□□□□□ -1.8
PKP4-201ENST00000389757 SPRR2AP35326 72 aa3.8□□□□□ -1.8
PKP4-201ENST00000389757 MT1BP07438 61 aa3.8□□□□□ -1.8
PKP4-201ENST00000389757 HYDINQ4G0P3 5121 aa3.79□□□□□ -1.8
PKP4-201ENST00000389757 MT1XP80297 61 aa3.78□□□□□ -1.8
PKP4-201ENST00000389757 HECTD4Q9Y4D8 3996 aa3.77□□□□□ -1.81
PKP4-201ENST00000389757 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
PKP4-201ENST00000389757 PKD1P98161 4303 aa3.76□□□□□ -1.81
PKP4-201ENST00000389757 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
PKP4-201ENST00000389757 LRP2P98164 4655 aa3.72□□□□□ -1.81
PKP4-201ENST00000389757 FRAS1Q86XX4 4008 aa3.7□□□□□ -1.82
PKP4-201ENST00000389757 SPRR2DP22532 72 aa3.68□□□□□ -1.82
PKP4-201ENST00000389757 LCE2BO14633 110 aa3.66□□□□□ -1.82
PKP4-201ENST00000389757 PKHD1P08F94 4074 aa3.65□□□□□ -1.83
PKP4-201ENST00000389757 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
PKP4-201ENST00000389757 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
PKP4-201ENST00000389757 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
PKP4-201ENST00000389757 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
PKP4-201ENST00000389757 MT1GP13640 62 aa3.61□□□□□ -1.83
PKP4-201ENST00000389757 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
PKP4-201ENST00000389757 LPAP08519 4548 aa3.57□□□□□ -1.84
PKP4-201ENST00000389757 ABCA13Q86UQ4 5058 aa3.55□□□□□ -1.84
PKP4-201ENST00000389757 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
PKP4-201ENST00000389757 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
PKP4-201ENST00000389757 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
PKP4-201ENST00000389757 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
PKP4-201ENST00000389757 TNXBP22105 4242 aa3.48□□□□□ -1.85
PKP4-201ENST00000389757 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
PKP4-201ENST00000389757 MUC17Q685J3 4493 aa3.47□□□□□ -1.85
PKP4-201ENST00000389757 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
PKP4-201ENST00000389757 LCE2DQ5TA82 110 aaPredicted RBP3.45□□□□□ -1.86
PKP4-201ENST00000389757 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
PKP4-201ENST00000389757 MT1EP04732 61 aa3.42□□□□□ -1.86
PKP4-201ENST00000389757 MT1LQ93083 61 aa3.42□□□□□ -1.86
PKP4-201ENST00000389757 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
PKP4-201ENST00000389757 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
PKP4-201ENST00000389757 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
PKP4-201ENST00000389757 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms