RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
CCDC57-202ENST00000389641 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
CCDC57-202ENST00000389641 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
CCDC57-202ENST00000389641 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
CCDC57-202ENST00000389641 KRTAP21-3Q3LHN1 58 aa7□□□□□ -1.29
CCDC57-202ENST00000389641 RYR2Q92736 4967 aa6.94□□□□□ -1.3
CCDC57-202ENST00000389641 APOBP04114 4563 aaKnown RBP6.94□□□□□ -1.3
CCDC57-202ENST00000389641 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
CCDC57-202ENST00000389641 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
CCDC57-202ENST00000389641 RYR3Q15413 4870 aa6.93□□□□□ -1.3
CCDC57-202ENST00000389641 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
CCDC57-202ENST00000389641 LRP1Q07954 4544 aaKnown RBP6.92□□□□□ -1.3
CCDC57-202ENST00000389641 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
CCDC57-202ENST00000389641 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
CCDC57-202ENST00000389641 S4R3F8 94 aa6.87□□□□□ -1.31
CCDC57-202ENST00000389641 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
CCDC57-202ENST00000389641 HSPG2P98160 4391 aa6.84□□□□□ -1.31
CCDC57-202ENST00000389641 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
CCDC57-202ENST00000389641 PKHD1L1Q86WI1 4243 aa6.81□□□□□ -1.32
CCDC57-202ENST00000389641 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
CCDC57-202ENST00000389641 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
CCDC57-202ENST00000389641 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
CCDC57-202ENST00000389641 EPPK1P58107 5090 aaKnown RBP6.72□□□□□ -1.33
CCDC57-202ENST00000389641 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
CCDC57-202ENST00000389641 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.33
CCDC57-202ENST00000389641 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
CCDC57-202ENST00000389641 XP32Q5T750 250 aa6.66□□□□□ -1.34
CCDC57-202ENST00000389641 LPAP08519 4548 aa6.64□□□□□ -1.35
CCDC57-202ENST00000389641 RYR1P21817 5038 aa6.59□□□□□ -1.35
CCDC57-202ENST00000389641 Q5VSD8 79 aa6.58□□□□□ -1.36
CCDC57-202ENST00000389641 TNXBP22105 4242 aa6.56□□□□□ -1.36
CCDC57-202ENST00000389641 ABCA13Q86UQ4 5058 aa6.55□□□□□ -1.36
CCDC57-202ENST00000389641 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
CCDC57-202ENST00000389641 M0QZ58 72 aa6.5□□□□□ -1.37
CCDC57-202ENST00000389641 PLAC4Q8WY50 150 aa6.48□□□□□ -1.37
CCDC57-202ENST00000389641 LRP2P98164 4655 aa6.47□□□□□ -1.37
CCDC57-202ENST00000389641 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
CCDC57-202ENST00000389641 R4GN34 69 aa6.4□□□□□ -1.38
CCDC57-202ENST00000389641 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
CCDC57-202ENST00000389641 MUC2Q02817 5179 aa6.33□□□□□ -1.4
CCDC57-202ENST00000389641 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
CCDC57-202ENST00000389641 HERC2O95714 4834 aa6.25□□□□□ -1.41
CCDC57-202ENST00000389641 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
CCDC57-202ENST00000389641 HERC1Q15751 4861 aa6.17□□□□□ -1.42
CCDC57-202ENST00000389641 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
CCDC57-202ENST00000389641 PCLOQ9Y6V0 5065 aa6.13□□□□□ -1.43
CCDC57-202ENST00000389641 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
CCDC57-202ENST00000389641 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
CCDC57-202ENST00000389641 MUC17Q685J3 4493 aa5.99□□□□□ -1.45
CCDC57-202ENST00000389641 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
CCDC57-202ENST00000389641 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
CCDC57-202ENST00000389641 BIRC6Q9NR09 4857 aa5.96□□□□□ -1.46
CCDC57-202ENST00000389641 TNP1P09430 55 aa5.88□□□□□ -1.47
CCDC57-202ENST00000389641 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
CCDC57-202ENST00000389641 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
CCDC57-202ENST00000389641 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
CCDC57-202ENST00000389641 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
CCDC57-202ENST00000389641 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
CCDC57-202ENST00000389641 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
CCDC57-202ENST00000389641 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
CCDC57-202ENST00000389641 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
CCDC57-202ENST00000389641 M0R2T5 61 aa5.48□□□□□ -1.53
CCDC57-202ENST00000389641 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
CCDC57-202ENST00000389641 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
CCDC57-202ENST00000389641 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
CCDC57-202ENST00000389641 INE1O15225 51 aa5.42□□□□□ -1.54
CCDC57-202ENST00000389641 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
CCDC57-202ENST00000389641 USH2AO75445 5202 aa5.33□□□□□ -1.56
CCDC57-202ENST00000389641 MT1HP80294 61 aa5.31□□□□□ -1.56
CCDC57-202ENST00000389641 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
CCDC57-202ENST00000389641 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
CCDC57-202ENST00000389641 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
CCDC57-202ENST00000389641 MT1FP04733 61 aa5.23□□□□□ -1.57
CCDC57-202ENST00000389641 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
CCDC57-202ENST00000389641 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
CCDC57-202ENST00000389641 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
CCDC57-202ENST00000389641 MT2AP02795 61 aa5.19□□□□□ -1.58
CCDC57-202ENST00000389641 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
CCDC57-202ENST00000389641 MT1XP80297 61 aa5.15□□□□□ -1.58
CCDC57-202ENST00000389641 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
CCDC57-202ENST00000389641 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
CCDC57-202ENST00000389641 LCE2BO14633 110 aa5.11□□□□□ -1.59
CCDC57-202ENST00000389641 KMT2DO14686 5537 aa5.1□□□□□ -1.59
CCDC57-202ENST00000389641 MT1BP07438 61 aa5.09□□□□□ -1.6
CCDC57-202ENST00000389641 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
CCDC57-202ENST00000389641 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
CCDC57-202ENST00000389641 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
CCDC57-202ENST00000389641 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
CCDC57-202ENST00000389641 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
CCDC57-202ENST00000389641 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CCDC57-202ENST00000389641 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
CCDC57-202ENST00000389641 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
CCDC57-202ENST00000389641 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
CCDC57-202ENST00000389641 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
CCDC57-202ENST00000389641 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
CCDC57-202ENST00000389641 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
CCDC57-202ENST00000389641 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
CCDC57-202ENST00000389641 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
CCDC57-202ENST00000389641 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
CCDC57-202ENST00000389641 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms