RNA–Protein interactions for RNA: ENST00000382499.6

SYNJ1-203, Transcript of synaptojanin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNJ1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ1-203ENST00000382499 TENM2Q9NT68 2774 aa4.64□□□□□ -1.67
SYNJ1-203ENST00000382499 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
SYNJ1-203ENST00000382499 DNAH7Q8WXX0 4024 aa4.62□□□□□ -1.67
SYNJ1-203ENST00000382499 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.67
SYNJ1-203ENST00000382499 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
SYNJ1-203ENST00000382499 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
SYNJ1-203ENST00000382499 FRAS1Q86XX4 4008 aa4.56□□□□□ -1.68
SYNJ1-203ENST00000382499 VPS13DQ5THJ4 4388 aa4.55□□□□□ -1.68
SYNJ1-203ENST00000382499 COL7A1Q02388 2944 aa4.53□□□□□ -1.68
SYNJ1-203ENST00000382499 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
SYNJ1-203ENST00000382499 HECTD4Q9Y4D8 3996 aa4.51□□□□□ -1.69
SYNJ1-203ENST00000382499 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
SYNJ1-203ENST00000382499 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
SYNJ1-203ENST00000382499 DNAH6Q9C0G6 4158 aa4.46□□□□□ -1.69
SYNJ1-203ENST00000382499 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
SYNJ1-203ENST00000382499 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
SYNJ1-203ENST00000382499 LRP1BQ9NZR2 4599 aa4.42□□□□□ -1.7
SYNJ1-203ENST00000382499 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
SYNJ1-203ENST00000382499 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
SYNJ1-203ENST00000382499 SACSQ9NZJ4 4579 aa4.35□□□□□ -1.71
SYNJ1-203ENST00000382499 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
SYNJ1-203ENST00000382499 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
SYNJ1-203ENST00000382499 HYDINQ4G0P3 5121 aa4.31□□□□□ -1.72
SYNJ1-203ENST00000382499 INE1O15225 51 aa4.29□□□□□ -1.72
SYNJ1-203ENST00000382499 PKD1P98161 4303 aa4.28□□□□□ -1.72
SYNJ1-203ENST00000382499 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
SYNJ1-203ENST00000382499 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
SYNJ1-203ENST00000382499 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
SYNJ1-203ENST00000382499 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
SYNJ1-203ENST00000382499 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
SYNJ1-203ENST00000382499 RYR2Q92736 4967 aa4.21□□□□□ -1.74
SYNJ1-203ENST00000382499 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
SYNJ1-203ENST00000382499 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
SYNJ1-203ENST00000382499 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
SYNJ1-203ENST00000382499 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
SYNJ1-203ENST00000382499 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
SYNJ1-203ENST00000382499 RYR3Q15413 4870 aa4.14□□□□□ -1.75
SYNJ1-203ENST00000382499 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
SYNJ1-203ENST00000382499 MT1HL1P0DM35 61 aa4.12□□□□□ -1.75
SYNJ1-203ENST00000382499 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
SYNJ1-203ENST00000382499 PKHD1P08F94 4074 aa4.09□□□□□ -1.76
SYNJ1-203ENST00000382499 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
SYNJ1-203ENST00000382499 HSPG2P98160 4391 aa4.07□□□□□ -1.76
SYNJ1-203ENST00000382499 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
SYNJ1-203ENST00000382499 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
SYNJ1-203ENST00000382499 FAT1Q14517 4588 aa4.05□□□□□ -1.76
SYNJ1-203ENST00000382499 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
SYNJ1-203ENST00000382499 SPRR2EP22531 72 aa4.04□□□□□ -1.76
SYNJ1-203ENST00000382499 SPRR2BP35325 72 aa4.04□□□□□ -1.76
SYNJ1-203ENST00000382499 SPRR2AP35326 72 aa4.04□□□□□ -1.76
SYNJ1-203ENST00000382499 LRP1Q07954 4544 aaKnown RBP4.02□□□□□ -1.77
SYNJ1-203ENST00000382499 EPPK1P58107 5090 aaKnown RBP4.02□□□□□ -1.77
SYNJ1-203ENST00000382499 KRTAP3-3Q9BYR6 98 aa4.01□□□□□ -1.77
SYNJ1-203ENST00000382499 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
SYNJ1-203ENST00000382499 TNXBP22105 4242 aa3.95□□□□□ -1.78
SYNJ1-203ENST00000382499 HERC2O95714 4834 aa3.95□□□□□ -1.78
SYNJ1-203ENST00000382499 SPRR2DP22532 72 aa3.93□□□□□ -1.78
SYNJ1-203ENST00000382499 RYR1P21817 5038 aa3.92□□□□□ -1.78
SYNJ1-203ENST00000382499 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
SYNJ1-203ENST00000382499 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
SYNJ1-203ENST00000382499 LPAP08519 4548 aa3.88□□□□□ -1.79
SYNJ1-203ENST00000382499 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SYNJ1-203ENST00000382499 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
SYNJ1-203ENST00000382499 LCE2BO14633 110 aa3.81□□□□□ -1.8
SYNJ1-203ENST00000382499 MT1HP80294 61 aa3.79□□□□□ -1.8
SYNJ1-203ENST00000382499 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
SYNJ1-203ENST00000382499 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
SYNJ1-203ENST00000382499 LRP2P98164 4655 aa3.71□□□□□ -1.82
SYNJ1-203ENST00000382499 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
SYNJ1-203ENST00000382499 MT2AP02795 61 aa3.66□□□□□ -1.82
SYNJ1-203ENST00000382499 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
SYNJ1-203ENST00000382499 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.83
SYNJ1-203ENST00000382499 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
SYNJ1-203ENST00000382499 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
SYNJ1-203ENST00000382499 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
SYNJ1-203ENST00000382499 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
SYNJ1-203ENST00000382499 HERC1Q15751 4861 aa3.55□□□□□ -1.84
SYNJ1-203ENST00000382499 MT1FP04733 61 aa3.52□□□□□ -1.85
SYNJ1-203ENST00000382499 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
SYNJ1-203ENST00000382499 KRTAP4-1Q9BYQ7 146 aa3.48□□□□□ -1.85
SYNJ1-203ENST00000382499 MT4P47944 62 aa3.47□□□□□ -1.85
SYNJ1-203ENST00000382499 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.85
SYNJ1-203ENST00000382499 MUC2Q02817 5179 aa3.45□□□□□ -1.86
SYNJ1-203ENST00000382499 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
SYNJ1-203ENST00000382499 MT1GP13640 62 aa3.44□□□□□ -1.86
SYNJ1-203ENST00000382499 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
SYNJ1-203ENST00000382499 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
SYNJ1-203ENST00000382499 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
SYNJ1-203ENST00000382499 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SYNJ1-203ENST00000382499 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
SYNJ1-203ENST00000382499 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SYNJ1-203ENST00000382499 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
SYNJ1-203ENST00000382499 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
SYNJ1-203ENST00000382499 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
SYNJ1-203ENST00000382499 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
SYNJ1-203ENST00000382499 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
SYNJ1-203ENST00000382499 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
SYNJ1-203ENST00000382499 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
SYNJ1-203ENST00000382499 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
SYNJ1-203ENST00000382499 MT3P25713 68 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms