RNA–Protein interactions for RNA: ENST00000380880.3

FREM1-202, Transcript of FRAS1 related extracellular matrix 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM1, Length 7,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-202ENST00000380880 AKAP9Q99996 3911 aa3.73□□□□□ -1.81
FREM1-202ENST00000380880 MEGF8Q7Z7M0 2845 aa3.72□□□□□ -1.81
FREM1-202ENST00000380880 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
FREM1-202ENST00000380880 COL7A1Q02388 2944 aa3.7□□□□□ -1.82
FREM1-202ENST00000380880 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
FREM1-202ENST00000380880 ZNF469Q96JG9 3925 aaPredicted RBP3.68□□□□□ -1.82
FREM1-202ENST00000380880 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.82
FREM1-202ENST00000380880 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.82
FREM1-202ENST00000380880 MT1HP80294 61 aa3.64□□□□□ -1.83
FREM1-202ENST00000380880 SPRR2DP22532 72 aa3.62□□□□□ -1.83
FREM1-202ENST00000380880 OTOGQ6ZRI0 2925 aa3.61□□□□□ -1.83
FREM1-202ENST00000380880 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
FREM1-202ENST00000380880 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
FREM1-202ENST00000380880 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
FREM1-202ENST00000380880 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
FREM1-202ENST00000380880 LCE2BO14633 110 aa3.54□□□□□ -1.84
FREM1-202ENST00000380880 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
FREM1-202ENST00000380880 LCE3BQ5TA77 95 aa3.53□□□□□ -1.84
FREM1-202ENST00000380880 MT2AP02795 61 aa3.52□□□□□ -1.85
FREM1-202ENST00000380880 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
FREM1-202ENST00000380880 DNAH1Q9P2D7 4330 aa3.47□□□□□ -1.85
FREM1-202ENST00000380880 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
FREM1-202ENST00000380880 KRTAP4-1Q9BYQ7 146 aa3.43□□□□□ -1.86
FREM1-202ENST00000380880 MT1FP04733 61 aa3.42□□□□□ -1.86
FREM1-202ENST00000380880 FRAS1Q86XX4 4008 aa3.4□□□□□ -1.87
FREM1-202ENST00000380880 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
FREM1-202ENST00000380880 MT1GP13640 62 aa3.35□□□□□ -1.87
FREM1-202ENST00000380880 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.87
FREM1-202ENST00000380880 DNAH2Q9P225 4427 aa3.34□□□□□ -1.88
FREM1-202ENST00000380880 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.88
FREM1-202ENST00000380880 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
FREM1-202ENST00000380880 LYSTQ99698 3801 aa3.28□□□□□ -1.89
FREM1-202ENST00000380880 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
FREM1-202ENST00000380880 KMT2AQ03164 3969 aa3.27□□□□□ -1.89
FREM1-202ENST00000380880 DNAH3Q8TD57 4116 aa3.25□□□□□ -1.89
FREM1-202ENST00000380880 ANK2Q01484 3957 aa3.25□□□□□ -1.89
FREM1-202ENST00000380880 DNAH10Q8IVF4 4471 aa3.22□□□□□ -1.89
FREM1-202ENST00000380880 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
FREM1-202ENST00000380880 MT4P47944 62 aa3.22□□□□□ -1.89
FREM1-202ENST00000380880 VPS13BQ7Z7G8 4022 aa3.2□□□□□ -1.9
FREM1-202ENST00000380880 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
FREM1-202ENST00000380880 DNAH7Q8WXX0 4024 aa3.16□□□□□ -1.9
FREM1-202ENST00000380880 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
FREM1-202ENST00000380880 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
FREM1-202ENST00000380880 DNAH9Q9NYC9 4486 aa3.12□□□□□ -1.91
FREM1-202ENST00000380880 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
FREM1-202ENST00000380880 FAT2Q9NYQ8 4349 aa3.11□□□□□ -1.91
FREM1-202ENST00000380880 DNAH17Q9UFH2 4485 aa3.1□□□□□ -1.91
FREM1-202ENST00000380880 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
FREM1-202ENST00000380880 MT1XP80297 61 aa3.07□□□□□ -1.92
FREM1-202ENST00000380880 KRTAP4-8A0A0G2JLE6 195 aa3.06□□□□□ -1.92
FREM1-202ENST00000380880 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
FREM1-202ENST00000380880 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
FREM1-202ENST00000380880 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
FREM1-202ENST00000380880 MT3P25713 68 aa3.04□□□□□ -1.92
FREM1-202ENST00000380880 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
FREM1-202ENST00000380880 DNAH8Q96JB1 4490 aa3.01□□□□□ -1.93
FREM1-202ENST00000380880 LCE5AQ5TCM9 118 aa3.01□□□□□ -1.93
FREM1-202ENST00000380880 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
FREM1-202ENST00000380880 MT1BP07438 61 aa2.96□□□□□ -1.94
FREM1-202ENST00000380880 PLECQ15149 4684 aaKnown RBP2.96□□□□□ -1.94
FREM1-202ENST00000380880 PRM1P04553 51 aa2.95□□□□□ -1.94
FREM1-202ENST00000380880 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
FREM1-202ENST00000380880 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
FREM1-202ENST00000380880 DYNC2H1Q8NCM8 4307 aaKnown RBP2.94□□□□□ -1.94
FREM1-202ENST00000380880 VPS13DQ5THJ4 4388 aa2.94□□□□□ -1.94
FREM1-202ENST00000380880 MT1LQ93083 61 aa2.93□□□□□ -1.94
FREM1-202ENST00000380880 DNAH5Q8TE73 4624 aa2.93□□□□□ -1.94
FREM1-202ENST00000380880 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
FREM1-202ENST00000380880 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
FREM1-202ENST00000380880 KRTAP9-8Q9BYQ0 159 aa2.92□□□□□ -1.94
FREM1-202ENST00000380880 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
FREM1-202ENST00000380880 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
FREM1-202ENST00000380880 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
FREM1-202ENST00000380880 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
FREM1-202ENST00000380880 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
FREM1-202ENST00000380880 FAT1Q14517 4588 aa2.88□□□□□ -1.95
FREM1-202ENST00000380880 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
FREM1-202ENST00000380880 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
FREM1-202ENST00000380880 KRTAP19-6Q3LI70 58 aa2.85□□□□□ -1.95
FREM1-202ENST00000380880 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
FREM1-202ENST00000380880 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
FREM1-202ENST00000380880 MT1EP04732 61 aa2.84□□□□□ -1.96
FREM1-202ENST00000380880 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
FREM1-202ENST00000380880 MT1MQ8N339 61 aa2.81□□□□□ -1.96
FREM1-202ENST00000380880 LRP1BQ9NZR2 4599 aa2.8□□□□□ -1.96
FREM1-202ENST00000380880 DYNC1H1Q14204 4646 aaKnown RBP2.77□□□□□ -1.97
FREM1-202ENST00000380880 FAT3Q8TDW7 4589 aa2.77□□□□□ -1.97
FREM1-202ENST00000380880 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
FREM1-202ENST00000380880 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
FREM1-202ENST00000380880 APOBP04114 4563 aaKnown RBP2.74□□□□□ -1.97
FREM1-202ENST00000380880 SACSQ9NZJ4 4579 aa2.74□□□□□ -1.97
FREM1-202ENST00000380880 DNHD1Q96M86 4753 aa2.74□□□□□ -1.97
FREM1-202ENST00000380880 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.98
FREM1-202ENST00000380880 PKD1P98161 4303 aa2.71□□□□□ -1.98
FREM1-202ENST00000380880 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
FREM1-202ENST00000380880 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
FREM1-202ENST00000380880 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
FREM1-202ENST00000380880 MT1AP04731 61 aa2.63□□□□□ -1.99
FREM1-202ENST00000380880 TNXBP22105 4242 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms