RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
FREM1-201ENST00000380875 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
FREM1-201ENST00000380875 DNAH1Q9P2D7 4330 aa3.69□□□□□ -1.82
FREM1-201ENST00000380875 MT2AP02795 61 aa3.69□□□□□ -1.82
FREM1-201ENST00000380875 LAMA5O15230 3695 aa3.68□□□□□ -1.82
FREM1-201ENST00000380875 SMG1Q96Q15 3661 aaKnown RBP3.65□□□□□ -1.82
FREM1-201ENST00000380875 SRRM2Q9UQ35 2752 aaKnown RBP3.65□□□□□ -1.83
FREM1-201ENST00000380875 TRRAPQ9Y4A5 3859 aa3.65□□□□□ -1.83
FREM1-201ENST00000380875 DNAH9Q9NYC9 4486 aa3.64□□□□□ -1.83
FREM1-201ENST00000380875 MEGF8Q7Z7M0 2845 aa3.64□□□□□ -1.83
FREM1-201ENST00000380875 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
FREM1-201ENST00000380875 SVEP1Q4LDE5 3571 aa3.62□□□□□ -1.83
FREM1-201ENST00000380875 DNAH2Q9P225 4427 aa3.61□□□□□ -1.83
FREM1-201ENST00000380875 MT1FP04733 61 aa3.6□□□□□ -1.83
FREM1-201ENST00000380875 SPRR2DP22532 72 aa3.6□□□□□ -1.83
FREM1-201ENST00000380875 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
FREM1-201ENST00000380875 COL7A1Q02388 2944 aa3.54□□□□□ -1.84
FREM1-201ENST00000380875 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
FREM1-201ENST00000380875 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
FREM1-201ENST00000380875 AKAP9Q99996 3911 aa3.53□□□□□ -1.84
FREM1-201ENST00000380875 VPS13CQ709C8 3753 aa3.52□□□□□ -1.85
FREM1-201ENST00000380875 DNAH11Q96DT5 4516 aa3.5□□□□□ -1.85
FREM1-201ENST00000380875 DNAH10Q8IVF4 4471 aa3.49□□□□□ -1.85
FREM1-201ENST00000380875 LCE2BO14633 110 aa3.49□□□□□ -1.85
FREM1-201ENST00000380875 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.85
FREM1-201ENST00000380875 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
FREM1-201ENST00000380875 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
FREM1-201ENST00000380875 PLECQ15149 4684 aaKnown RBP3.43□□□□□ -1.86
FREM1-201ENST00000380875 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
FREM1-201ENST00000380875 DNAH3Q8TD57 4116 aa3.4□□□□□ -1.86
FREM1-201ENST00000380875 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
FREM1-201ENST00000380875 DYNC1H1Q14204 4646 aaKnown RBP3.36□□□□□ -1.87
FREM1-201ENST00000380875 CSMD3Q7Z407 3707 aa3.36□□□□□ -1.87
FREM1-201ENST00000380875 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
FREM1-201ENST00000380875 MT1GP13640 62 aa3.34□□□□□ -1.87
FREM1-201ENST00000380875 DYNC2H1Q8NCM8 4307 aaKnown RBP3.34□□□□□ -1.87
FREM1-201ENST00000380875 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.88
FREM1-201ENST00000380875 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
FREM1-201ENST00000380875 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
FREM1-201ENST00000380875 LCE2CQ5TA81 110 aa3.31□□□□□ -1.88
FREM1-201ENST00000380875 DNAH7Q8WXX0 4024 aa3.3□□□□□ -1.88
FREM1-201ENST00000380875 SACSQ9NZJ4 4579 aa3.28□□□□□ -1.88
FREM1-201ENST00000380875 ZNF469Q96JG9 3925 aaPredicted RBP3.28□□□□□ -1.88
FREM1-201ENST00000380875 PRKDCP78527 4128 aaKnown RBP3.28□□□□□ -1.88
FREM1-201ENST00000380875 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
FREM1-201ENST00000380875 DNAH6Q9C0G6 4158 aa3.27□□□□□ -1.89
FREM1-201ENST00000380875 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
FREM1-201ENST00000380875 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
FREM1-201ENST00000380875 STARD9Q9P2P6 4700 aa3.24□□□□□ -1.89
FREM1-201ENST00000380875 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
FREM1-201ENST00000380875 FAT1Q14517 4588 aa3.23□□□□□ -1.89
FREM1-201ENST00000380875 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
FREM1-201ENST00000380875 ANK2Q01484 3957 aa3.22□□□□□ -1.89
FREM1-201ENST00000380875 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.9
FREM1-201ENST00000380875 MT4P47944 62 aa3.21□□□□□ -1.9
FREM1-201ENST00000380875 RYR1P21817 5038 aa3.21□□□□□ -1.9
FREM1-201ENST00000380875 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
FREM1-201ENST00000380875 MT1XP80297 61 aa3.21□□□□□ -1.9
FREM1-201ENST00000380875 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
FREM1-201ENST00000380875 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
FREM1-201ENST00000380875 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
FREM1-201ENST00000380875 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
FREM1-201ENST00000380875 HERC1Q15751 4861 aa3.19□□□□□ -1.9
FREM1-201ENST00000380875 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
FREM1-201ENST00000380875 PKHD1L1Q86WI1 4243 aa3.16□□□□□ -1.9
FREM1-201ENST00000380875 RYR3Q15413 4870 aa3.16□□□□□ -1.9
FREM1-201ENST00000380875 MT1BP07438 61 aa3.15□□□□□ -1.9
FREM1-201ENST00000380875 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.91
FREM1-201ENST00000380875 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
FREM1-201ENST00000380875 KMT2AQ03164 3969 aa3.13□□□□□ -1.91
FREM1-201ENST00000380875 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
FREM1-201ENST00000380875 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
FREM1-201ENST00000380875 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
FREM1-201ENST00000380875 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
FREM1-201ENST00000380875 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
FREM1-201ENST00000380875 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
FREM1-201ENST00000380875 HSPG2P98160 4391 aa3.03□□□□□ -1.92
FREM1-201ENST00000380875 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
FREM1-201ENST00000380875 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
FREM1-201ENST00000380875 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
FREM1-201ENST00000380875 LYSTQ99698 3801 aa2.99□□□□□ -1.93
FREM1-201ENST00000380875 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
FREM1-201ENST00000380875 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.93
FREM1-201ENST00000380875 PKD1P98161 4303 aa2.94□□□□□ -1.94
FREM1-201ENST00000380875 MT3P25713 68 aa2.94□□□□□ -1.94
FREM1-201ENST00000380875 MT1LQ93083 61 aa2.94□□□□□ -1.94
FREM1-201ENST00000380875 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
FREM1-201ENST00000380875 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
FREM1-201ENST00000380875 MT1EP04732 61 aa2.92□□□□□ -1.94
FREM1-201ENST00000380875 RYR2Q92736 4967 aa2.92□□□□□ -1.94
FREM1-201ENST00000380875 LPAP08519 4548 aa2.89□□□□□ -1.95
FREM1-201ENST00000380875 HERC2O95714 4834 aa2.89□□□□□ -1.95
FREM1-201ENST00000380875 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
FREM1-201ENST00000380875 MT1MQ8N339 61 aa2.89□□□□□ -1.95
FREM1-201ENST00000380875 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
FREM1-201ENST00000380875 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
FREM1-201ENST00000380875 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
FREM1-201ENST00000380875 HECTD4Q9Y4D8 3996 aa2.86□□□□□ -1.95
FREM1-201ENST00000380875 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
FREM1-201ENST00000380875 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms