RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
SMN1-202ENST00000380707 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
SMN1-202ENST00000380707 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
SMN1-202ENST00000380707 MP68P56378 58 aa6.29□□□□□ -1.4
SMN1-202ENST00000380707 LINC00208Q96KT6 92 aa6.29□□□□□ -1.4
SMN1-202ENST00000380707 SMIM20Q8N5G0 67 aa6.27□□□□□ -1.41
SMN1-202ENST00000380707 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
SMN1-202ENST00000380707 M0R2T5 61 aa6.26□□□□□ -1.41
SMN1-202ENST00000380707 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
SMN1-202ENST00000380707 H3BPC8 53 aa6.23□□□□□ -1.41
SMN1-202ENST00000380707 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
SMN1-202ENST00000380707 H1FX-AS1Q4G0G2 97 aa6.23□□□□□ -1.41
SMN1-202ENST00000380707 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
SMN1-202ENST00000380707 SERP2Q8N6R1 65 aa6.18□□□□□ -1.42
SMN1-202ENST00000380707 SNURFQ9Y675 71 aa6.12□□□□□ -1.43
SMN1-202ENST00000380707 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
SMN1-202ENST00000380707 S4R3F8 94 aa6.09□□□□□ -1.43
SMN1-202ENST00000380707 LCA10Q71F78 164 aa6.09□□□□□ -1.44
SMN1-202ENST00000380707 COX7CP15954 63 aa6.08□□□□□ -1.44
SMN1-202ENST00000380707 A8MUN3 132 aa6.07□□□□□ -1.44
SMN1-202ENST00000380707 ANAPC13Q9BS18 74 aa6.04□□□□□ -1.44
SMN1-202ENST00000380707 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
SMN1-202ENST00000380707 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
SMN1-202ENST00000380707 MT2AP02795 61 aa6.02□□□□□ -1.45
SMN1-202ENST00000380707 CSAG1Q6PB30 78 aa6□□□□□ -1.45
SMN1-202ENST00000380707 MT1FP04733 61 aa5.98□□□□□ -1.45
SMN1-202ENST00000380707 CYSTM1Q9H1C7 97 aa5.98□□□□□ -1.45
SMN1-202ENST00000380707 NDUFC1O43677 76 aa5.96□□□□□ -1.46
SMN1-202ENST00000380707 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
SMN1-202ENST00000380707 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
SMN1-202ENST00000380707 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
SMN1-202ENST00000380707 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
SMN1-202ENST00000380707 ACYP2P14621 99 aa5.94□□□□□ -1.46
SMN1-202ENST00000380707 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
SMN1-202ENST00000380707 H7BZZ5 65 aa5.92□□□□□ -1.46
SMN1-202ENST00000380707 USH2AO75445 5202 aa5.85□□□□□ -1.47
SMN1-202ENST00000380707 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
SMN1-202ENST00000380707 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
SMN1-202ENST00000380707 H0YAA0 97 aa5.82□□□□□ -1.48
SMN1-202ENST00000380707 COA5Q86WW8 74 aa5.79□□□□□ -1.48
SMN1-202ENST00000380707 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
SMN1-202ENST00000380707 SPTSSBQ8NFR3 76 aa5.78□□□□□ -1.48
SMN1-202ENST00000380707 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
SMN1-202ENST00000380707 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
SMN1-202ENST00000380707 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
SMN1-202ENST00000380707 P0C880 135 aa5.72□□□□□ -1.49
SMN1-202ENST00000380707 ATP5EP56381 51 aaPredicted RBP5.7□□□□□ -1.5
SMN1-202ENST00000380707 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
SMN1-202ENST00000380707 TMEM258P61165 79 aa5.69□□□□□ -1.5
SMN1-202ENST00000380707 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
SMN1-202ENST00000380707 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
SMN1-202ENST00000380707 PCP4P48539 62 aa5.64□□□□□ -1.51
SMN1-202ENST00000380707 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.62□□□□□ -1.51
SMN1-202ENST00000380707 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
SMN1-202ENST00000380707 R4GN34 69 aa5.6□□□□□ -1.51
SMN1-202ENST00000380707 M0QZ58 72 aa5.58□□□□□ -1.52
SMN1-202ENST00000380707 MT1BP07438 61 aa5.57□□□□□ -1.52
SMN1-202ENST00000380707 Q5VV11 94 aa5.57□□□□□ -1.52
SMN1-202ENST00000380707 SEC61GP60059 68 aa5.54□□□□□ -1.52
SMN1-202ENST00000380707 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
SMN1-202ENST00000380707 SERP1Q9Y6X1 66 aa5.53□□□□□ -1.52
SMN1-202ENST00000380707 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
SMN1-202ENST00000380707 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SMN1-202ENST00000380707 A0A1B0GU69 56 aa5.48□□□□□ -1.53
SMN1-202ENST00000380707 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
SMN1-202ENST00000380707 A0A1B0GU33 70 aa5.44□□□□□ -1.54
SMN1-202ENST00000380707 LINC01558Q9Y6Z2 57 aa5.44□□□□□ -1.54
SMN1-202ENST00000380707 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
SMN1-202ENST00000380707 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
SMN1-202ENST00000380707 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
SMN1-202ENST00000380707 A6NN06 94 aa5.36□□□□□ -1.55
SMN1-202ENST00000380707 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
SMN1-202ENST00000380707 A0A0D9SG42 100 aa5.33□□□□□ -1.56
SMN1-202ENST00000380707 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
SMN1-202ENST00000380707 Q1T7F1 81 aa5.32□□□□□ -1.56
SMN1-202ENST00000380707 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
SMN1-202ENST00000380707 MT1XP80297 61 aa5.31□□□□□ -1.56
SMN1-202ENST00000380707 V9GYY9 64 aa5.3□□□□□ -1.56
SMN1-202ENST00000380707 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
SMN1-202ENST00000380707 A8MU10 97 aa5.27□□□□□ -1.57
SMN1-202ENST00000380707 PSPHP1O15172 72 aa5.27□□□□□ -1.57
SMN1-202ENST00000380707 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
SMN1-202ENST00000380707 UQCR11O14957 56 aa5.24□□□□□ -1.57
SMN1-202ENST00000380707 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
SMN1-202ENST00000380707 SPINT4Q6UDR6 99 aa5.23□□□□□ -1.57
SMN1-202ENST00000380707 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
SMN1-202ENST00000380707 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
SMN1-202ENST00000380707 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
SMN1-202ENST00000380707 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
SMN1-202ENST00000380707 KMT2DO14686 5537 aa5.17□□□□□ -1.58
SMN1-202ENST00000380707 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.58
SMN1-202ENST00000380707 A6NED7 52 aa5.09□□□□□ -1.59
SMN1-202ENST00000380707 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
SMN1-202ENST00000380707 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
SMN1-202ENST00000380707 KRTAP5-9P26371 169 aa5□□□□□ -1.61
SMN1-202ENST00000380707 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
SMN1-202ENST00000380707 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
SMN1-202ENST00000380707 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
SMN1-202ENST00000380707 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
SMN1-202ENST00000380707 K7ERS5 55 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms