RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 H1FX-AS1Q4G0G2 97 aa13.78□□□□□ -0.2
TRAPPC10-202ENST00000380221 Q1T7F1 81 aa13.74□□□□□ -0.21
TRAPPC10-202ENST00000380221 FAT4Q6V0I7 4981 aa13.73□□□□□ -0.21
TRAPPC10-202ENST00000380221 V9GYY9 64 aa13.68□□□□□ -0.22
TRAPPC10-202ENST00000380221 SPTSSBQ8NFR3 76 aa13.65□□□□□ -0.22
TRAPPC10-202ENST00000380221 FLGP20930 4061 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC10-202ENST00000380221 S4R3F8 94 aa13.63□□□□□ -0.23
TRAPPC10-202ENST00000380221 LCA10Q71F78 164 aa13.6□□□□□ -0.23
TRAPPC10-202ENST00000380221 LINC01558Q9Y6Z2 57 aa13.6□□□□□ -0.23
TRAPPC10-202ENST00000380221 KRTAP3-3Q9BYR6 98 aa13.54□□□□□ -0.24
TRAPPC10-202ENST00000380221 PSPHP1O15172 72 aa13.53□□□□□ -0.24
TRAPPC10-202ENST00000380221 MT1HP80294 61 aa13.53□□□□□ -0.24
TRAPPC10-202ENST00000380221 PRR15LQ9BU68 103 aa13.51□□□□□ -0.25
TRAPPC10-202ENST00000380221 A0A1B0GU69 56 aa13.4□□□□□ -0.26
TRAPPC10-202ENST00000380221 Q5VV11 94 aa13.39□□□□□ -0.27
TRAPPC10-202ENST00000380221 M0R2T5 61 aa13.37□□□□□ -0.27
TRAPPC10-202ENST00000380221 CSAG1Q6PB30 78 aa13.32□□□□□ -0.28
TRAPPC10-202ENST00000380221 SEC61GP60059 68 aa13.31□□□□□ -0.28
TRAPPC10-202ENST00000380221 LCE2AQ5TA79 106 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC10-202ENST00000380221 A6NED7 52 aa13.1□□□□□ -0.31
TRAPPC10-202ENST00000380221 KRTAP10-6P60371 365 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC10-202ENST00000380221 KRTAP3-2Q9BYR7 98 aa13.07□□□□□ -0.32
TRAPPC10-202ENST00000380221 ADM2Q7Z4H4 148 aa13.04□□□□□ -0.32
TRAPPC10-202ENST00000380221 LORP23490 312 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC10-202ENST00000380221 H0YAA0 97 aa12.99□□□□□ -0.33
TRAPPC10-202ENST00000380221 BRK1Q8WUW1 75 aa12.99□□□□□ -0.33
TRAPPC10-202ENST00000380221 A0A1B0GU33 70 aa12.99□□□□□ -0.33
TRAPPC10-202ENST00000380221 UQCR11O14957 56 aa12.99□□□□□ -0.33
TRAPPC10-202ENST00000380221 KRTAP9-8Q9BYQ0 159 aa12.97□□□□□ -0.33
TRAPPC10-202ENST00000380221 P0C880 135 aa12.97□□□□□ -0.33
TRAPPC10-202ENST00000380221 MT2AP02795 61 aa12.89□□□□□ -0.35
TRAPPC10-202ENST00000380221 CDC42SE1Q9NRR8 79 aa12.86□□□□□ -0.35
TRAPPC10-202ENST00000380221 MIR22HGQ0VDD5 57 aa12.86□□□□□ -0.35
TRAPPC10-202ENST00000380221 A8MU10 97 aa12.84□□□□□ -0.35
TRAPPC10-202ENST00000380221 MT1FP04733 61 aa12.82□□□□□ -0.36
TRAPPC10-202ENST00000380221 SPATA8Q6RVD6 105 aa12.82□□□□□ -0.36
TRAPPC10-202ENST00000380221 KRTAP10-10P60014 251 aa12.78□□□□□ -0.36
TRAPPC10-202ENST00000380221 KRTAP13-4Q3LI77 160 aa12.71□□□□□ -0.37
TRAPPC10-202ENST00000380221 PRO0628Q9UI54 55 aa12.69□□□□□ -0.38
TRAPPC10-202ENST00000380221 M0QZ58 72 aa12.61□□□□□ -0.39
TRAPPC10-202ENST00000380221 R4GN34 69 aa12.56□□□□□ -0.4
TRAPPC10-202ENST00000380221 CRIPTQ9P021 101 aa12.53□□□□□ -0.4
TRAPPC10-202ENST00000380221 KRTAP9-3Q9BYQ3 159 aa12.51□□□□□ -0.41
TRAPPC10-202ENST00000380221 A0A0D9SG42 100 aa12.5□□□□□ -0.41
TRAPPC10-202ENST00000380221 KRTAP19-1Q8IUB9 90 aa12.43□□□□□ -0.42
TRAPPC10-202ENST00000380221 SPRR2GQ9BYE4 73 aa12.41□□□□□ -0.42
TRAPPC10-202ENST00000380221 LINC01554Q52M75 96 aa12.35□□□□□ -0.43
TRAPPC10-202ENST00000380221 PMAIP1Q13794 54 aa12.28□□□□□ -0.44
TRAPPC10-202ENST00000380221 K7ERS5 55 aa12.25□□□□□ -0.45
TRAPPC10-202ENST00000380221 LCE2BO14633 110 aa12.25□□□□□ -0.45
TRAPPC10-202ENST00000380221 KRTAP12-1P59990 96 aa12.23□□□□□ -0.45
TRAPPC10-202ENST00000380221 KRTAP12-2P59991 146 aa12.2□□□□□ -0.46
TRAPPC10-202ENST00000380221 SPINT4Q6UDR6 99 aa12.2□□□□□ -0.46
TRAPPC10-202ENST00000380221 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC10-202ENST00000380221 A6NN06 94 aa12.19□□□□□ -0.46
TRAPPC10-202ENST00000380221 KRTAP19-8Q3LI54 63 aa12.14□□□□□ -0.47
TRAPPC10-202ENST00000380221 MT1BP07438 61 aa12.04□□□□□ -0.48
TRAPPC10-202ENST00000380221 USH2AO75445 5202 aa12.01□□□□□ -0.49
TRAPPC10-202ENST00000380221 KRTAP9-2Q9BYQ4 174 aa11.98□□□□□ -0.49
TRAPPC10-202ENST00000380221 PLAC4Q8WY50 150 aa11.91□□□□□ -0.5
TRAPPC10-202ENST00000380221 FSIP2Q5CZC0 6907 aa11.85□□□□□ -0.51
TRAPPC10-202ENST00000380221 CAMK2N1Q7Z7J9 78 aa11.77□□□□□ -0.52
TRAPPC10-202ENST00000380221 ROMO1P60602 79 aa11.77□□□□□ -0.53
TRAPPC10-202ENST00000380221 KTN1-AS1Q86SY8 53 aa11.76□□□□□ -0.53
TRAPPC10-202ENST00000380221 SSPOA2VEC9 5147 aa11.72□□□□□ -0.53
TRAPPC10-202ENST00000380221 SVIPQ8NHG7 77 aa11.62□□□□□ -0.55
TRAPPC10-202ENST00000380221 KRTAP19-6Q3LI70 58 aa11.57□□□□□ -0.56
TRAPPC10-202ENST00000380221 C10orf95Q9H7T3 257 aa11.57□□□□□ -0.56
TRAPPC10-202ENST00000380221 MT1XP80297 61 aa11.56□□□□□ -0.56
TRAPPC10-202ENST00000380221 KRTAP10-5P60370 271 aa11.53□□□□□ -0.56
TRAPPC10-202ENST00000380221 PRAC1Q96KF2 57 aa11.51□□□□□ -0.57
TRAPPC10-202ENST00000380221 CRCT1Q9UGL9 99 aa11.48□□□□□ -0.57
TRAPPC10-202ENST00000380221 PRO2289Q9P1D8 64 aa11.44□□□□□ -0.58
TRAPPC10-202ENST00000380221 FCGBPQ9Y6R7 5405 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC10-202ENST00000380221 KRTAP25-1Q3LHN0 102 aa11.24□□□□□ -0.61
TRAPPC10-202ENST00000380221 TNP1P09430 55 aa11.2□□□□□ -0.62
TRAPPC10-202ENST00000380221 KRTAP9-6A0A140TA67 174 aa11.18□□□□□ -0.62
TRAPPC10-202ENST00000380221 KRTAP10-7P60409 375 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC10-202ENST00000380221 KRTAP10-12P60413 245 aa10.95□□□□□ -0.66
TRAPPC10-202ENST00000380221 PP632Q6XCG6 107 aa10.87□□□□□ -0.67
TRAPPC10-202ENST00000380221 KMT2DO14686 5537 aa10.85□□□□□ -0.67
TRAPPC10-202ENST00000380221 MACF1Q9UPN3 7388 aaKnown RBP10.85□□□□□ -0.67
TRAPPC10-202ENST00000380221 KRTAP23-1A1A580 65 aa10.83□□□□□ -0.68
TRAPPC10-202ENST00000380221 KRTAP4-8A0A0G2JLE6 195 aa10.78□□□□□ -0.68
TRAPPC10-202ENST00000380221 KRTAP4-8Q9BYQ9 185 aa10.78□□□□□ -0.68
TRAPPC10-202ENST00000380221 LCE3AQ5TA76 89 aa10.73□□□□□ -0.69
TRAPPC10-202ENST00000380221 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.65□□□□□ -0.71
TRAPPC10-202ENST00000380221 SYNE2Q8WXH0 6885 aaKnown RBP10.58□□□□□ -0.72
TRAPPC10-202ENST00000380221 KRTAP8-1Q8IUC2 63 aa10.55□□□□□ -0.72
TRAPPC10-202ENST00000380221 KRTAP19-5Q3LI72 72 aa10.36□□□□□ -0.75
TRAPPC10-202ENST00000380221 KRTAP19-7Q3SYF9 63 aa10.31□□□□□ -0.76
TRAPPC10-202ENST00000380221 KRTAP12-3P60328 96 aa10.29□□□□□ -0.76
TRAPPC10-202ENST00000380221 SPRR2FQ96RM1 72 aa10.27□□□□□ -0.77
TRAPPC10-202ENST00000380221 KRTAP6-3Q3LI67 103 aa10.26□□□□□ -0.77
TRAPPC10-202ENST00000380221 KRTAP5-9P26371 169 aa10.25□□□□□ -0.77
TRAPPC10-202ENST00000380221 KRTAP9-7A8MTY7 169 aa10.19□□□□□ -0.78
TRAPPC10-202ENST00000380221 MT1EP04732 61 aa10.16□□□□□ -0.78
TRAPPC10-202ENST00000380221 MUC12Q9UKN1 5478 aa10.11□□□□□ -0.79
TRAPPC10-202ENST00000380221 KRTAP15-1Q3LI76 137 aa10.09□□□□□ -0.79
TRAPPC10-202ENST00000380221 MDN1Q9NU22 5596 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms