RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 MT1LQ93083 61 aa9.88□□□□□ -0.83
TRAPPC10-202ENST00000380221 LCE1AQ5T7P2 110 aa9.86□□□□□ -0.83
TRAPPC10-202ENST00000380221 SPRR2EP22531 72 aa9.84□□□□□ -0.83
TRAPPC10-202ENST00000380221 SPRR2BP35325 72 aa9.84□□□□□ -0.83
TRAPPC10-202ENST00000380221 SPRR2AP35326 72 aa9.84□□□□□ -0.83
TRAPPC10-202ENST00000380221 KRTAP19-3Q7Z4W3 81 aa9.83□□□□□ -0.84
TRAPPC10-202ENST00000380221 LCE5AQ5TCM9 118 aa9.72□□□□□ -0.85
TRAPPC10-202ENST00000380221 MT1GP13640 62 aa9.7□□□□□ -0.86
TRAPPC10-202ENST00000380221 NEBP20929 6669 aa9.65□□□□□ -0.86
TRAPPC10-202ENST00000380221 SPRR5A0A1B0GTR4 108 aa9.64□□□□□ -0.87
TRAPPC10-202ENST00000380221 LCE3CQ5T5A8 94 aa9.62□□□□□ -0.87
TRAPPC10-202ENST00000380221 MT1MQ8N339 61 aa9.59□□□□□ -0.87
TRAPPC10-202ENST00000380221 KRTAP19-4Q3LI73 84 aa9.57□□□□□ -0.88
TRAPPC10-202ENST00000380221 KRTAP4-7Q9BYR0 210 aa9.57□□□□□ -0.88
TRAPPC10-202ENST00000380221 SPRR2DP22532 72 aa9.49□□□□□ -0.89
TRAPPC10-202ENST00000380221 KRTAP4-3Q9BYR4 195 aa9.42□□□□□ -0.9
TRAPPC10-202ENST00000380221 LUZP6Q538Z0 58 aa9.35□□□□□ -0.91
TRAPPC10-202ENST00000380221 DSTQ03001 7570 aaKnown RBP9.31□□□□□ -0.92
TRAPPC10-202ENST00000380221 NDUFAF8A1L188 74 aa9.17□□□□□ -0.94
TRAPPC10-202ENST00000380221 LCE3BQ5TA77 95 aa9.14□□□□□ -0.95
TRAPPC10-202ENST00000380221 KRTAP9-6A8MVA2 160 aa9.12□□□□□ -0.95
TRAPPC10-202ENST00000380221 KRTAP2-3P0C7H8 128 aa9.05□□□□□ -0.96
TRAPPC10-202ENST00000380221 KRTAP2-4Q9BYR9 128 aa9.05□□□□□ -0.96
TRAPPC10-202ENST00000380221 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
TRAPPC10-202ENST00000380221 KRTAP20-1Q3LI63 56 aa9.01□□□□□ -0.97
TRAPPC10-202ENST00000380221 KRTAP2-2Q9BYT5 123 aa8.84□□□□□ -1
TRAPPC10-202ENST00000380221 KRTAP2-1Q9BYU5 128 aa8.84□□□□□ -1
TRAPPC10-202ENST00000380221 KRTAP5-5Q701N2 237 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC10-202ENST00000380221 KRTAP5-4Q6L8H1 288 aa8.47□□□□□ -1.05
TRAPPC10-202ENST00000380221 MT1AP04731 61 aa8.39□□□□□ -1.07
TRAPPC10-202ENST00000380221 LCE4AQ5TA78 99 aa8.39□□□□□ -1.07
TRAPPC10-202ENST00000380221 KRTAP6-1Q3LI64 71 aa8.35□□□□□ -1.07
TRAPPC10-202ENST00000380221 KRTAP4-9Q9BYQ8 210 aa8.3□□□□□ -1.08
TRAPPC10-202ENST00000380221 MT4P47944 62 aa8.27□□□□□ -1.09
TRAPPC10-202ENST00000380221 SYNE1Q8NF91 8797 aaKnown RBP8.25□□□□□ -1.09
TRAPPC10-202ENST00000380221 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
TRAPPC10-202ENST00000380221 KRTAP4-6Q9BYQ5 205 aa8.17□□□□□ -1.1
TRAPPC10-202ENST00000380221 KRTAP12-4P60329 112 aa8.15□□□□□ -1.1
TRAPPC10-202ENST00000380221 H3BS24 57 aa8.04□□□□□ -1.12
TRAPPC10-202ENST00000380221 HMCN1Q96RW7 5635 aa8.03□□□□□ -1.12
TRAPPC10-202ENST00000380221 KRTAP9-4Q9BYQ2 154 aa8.02□□□□□ -1.13
TRAPPC10-202ENST00000380221 A0A0A0MQY5 61 aa8.02□□□□□ -1.13
TRAPPC10-202ENST00000380221 KRTAP20-2Q3LI61 65 aa7.95□□□□□ -1.14
TRAPPC10-202ENST00000380221 KRTAP6-2Q3LI66 62 aa7.76□□□□□ -1.17
TRAPPC10-202ENST00000380221 KRTAP5-3Q6L8H2 238 aa7.68□□□□□ -1.18
TRAPPC10-202ENST00000380221 MT3P25713 68 aa7.62□□□□□ -1.19
TRAPPC10-202ENST00000380221 KRTAP5-2Q701N4 177 aa7.61□□□□□ -1.19
TRAPPC10-202ENST00000380221 INE1O15225 51 aa7.51□□□□□ -1.21
TRAPPC10-202ENST00000380221 AHNAK2Q8IVF2 5795 aa7.29□□□□□ -1.24
TRAPPC10-202ENST00000380221 LCE3DQ9BYE3 92 aa7.23□□□□□ -1.25
TRAPPC10-202ENST00000380221 OBSCNQ5VST9 7968 aa7.18□□□□□ -1.26
TRAPPC10-202ENST00000380221 LCE3EQ5T5B0 92 aa7.03□□□□□ -1.28
TRAPPC10-202ENST00000380221 KRTAP5-10Q6L8G5 202 aa7.01□□□□□ -1.29
TRAPPC10-202ENST00000380221 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
TRAPPC10-202ENST00000380221 GPR98Q8WXG9 6306 aa6.86□□□□□ -1.31
TRAPPC10-202ENST00000380221 KRTAP5-8O75690 187 aa6.74□□□□□ -1.33
TRAPPC10-202ENST00000380221 LCE1EQ5T753 118 aa6.71□□□□□ -1.34
TRAPPC10-202ENST00000380221 KRTAP5-1Q6L8H4 278 aa6.66□□□□□ -1.34
TRAPPC10-202ENST00000380221 KRTAP5-7Q6L8G8 165 aa6.54□□□□□ -1.36
TRAPPC10-202ENST00000380221 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
TRAPPC10-202ENST00000380221 LCE1BQ5T7P3 118 aa6.34□□□□□ -1.4
TRAPPC10-202ENST00000380221 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
TRAPPC10-202ENST00000380221 LCE1CQ5T751 118 aa6.25□□□□□ -1.41
TRAPPC10-202ENST00000380221 PRM1P04553 51 aa6.16□□□□□ -1.42
TRAPPC10-202ENST00000380221 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.43
TRAPPC10-202ENST00000380221 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC10-202ENST00000380221 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC10-202ENST00000380221 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
TRAPPC10-202ENST00000380221 AHNAKQ09666 5890 aaKnown RBP5.59□□□□□ -1.51
TRAPPC10-202ENST00000380221 KRTAP5-11Q6L8G4 156 aa5.55□□□□□ -1.52
TRAPPC10-202ENST00000380221 KRTAP21-2Q3LI59 83 aa5.47□□□□□ -1.53
TRAPPC10-202ENST00000380221 LCE1FQ5T754 118 aa5.09□□□□□ -1.59
TRAPPC10-202ENST00000380221 KRTAP4-4Q9BYR3 166 aa4.93□□□□□ -1.62
TRAPPC10-202ENST00000380221 PHGR1C9JFL3 82 aa4.78□□□□□ -1.64
TRAPPC10-202ENST00000380221 MUC19Q7Z5P9 8384 aa4.32□□□□□ -1.72
TRAPPC10-202ENST00000380221 KRTAP21-1Q3LI58 79 aa3.75□□□□□ -1.81
TRAPPC10-202ENST00000380221 MUC16Q8WXI7 14507 aa3.02□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms