RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 ANK3Q12955 4377 aaKnown RBP6.64□□□□□ -1.35
KCNC1-202ENST00000379472 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
KCNC1-202ENST00000379472 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
KCNC1-202ENST00000379472 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
KCNC1-202ENST00000379472 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
KCNC1-202ENST00000379472 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
KCNC1-202ENST00000379472 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
KCNC1-202ENST00000379472 CMYA5Q8N3K9 4069 aa6.31□□□□□ -1.4
KCNC1-202ENST00000379472 FRAS1Q86XX4 4008 aa6.31□□□□□ -1.4
KCNC1-202ENST00000379472 DNAH3Q8TD57 4116 aa6.3□□□□□ -1.4
KCNC1-202ENST00000379472 DNAH2Q9P225 4427 aa6.27□□□□□ -1.41
KCNC1-202ENST00000379472 SPRR2EP22531 72 aa6.26□□□□□ -1.41
KCNC1-202ENST00000379472 SPRR2BP35325 72 aa6.26□□□□□ -1.41
KCNC1-202ENST00000379472 SPRR2AP35326 72 aa6.26□□□□□ -1.41
KCNC1-202ENST00000379472 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
KCNC1-202ENST00000379472 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
KCNC1-202ENST00000379472 LYSTQ99698 3801 aa6.16□□□□□ -1.42
KCNC1-202ENST00000379472 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
KCNC1-202ENST00000379472 ANK2Q01484 3957 aa6.13□□□□□ -1.43
KCNC1-202ENST00000379472 MT1HP80294 61 aa6.13□□□□□ -1.43
KCNC1-202ENST00000379472 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
KCNC1-202ENST00000379472 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
KCNC1-202ENST00000379472 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
KCNC1-202ENST00000379472 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
KCNC1-202ENST00000379472 SPRR2DP22532 72 aa6.05□□□□□ -1.44
KCNC1-202ENST00000379472 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
KCNC1-202ENST00000379472 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
KCNC1-202ENST00000379472 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
KCNC1-202ENST00000379472 MT2AP02795 61 aa5.95□□□□□ -1.46
KCNC1-202ENST00000379472 LCE2BO14633 110 aa5.94□□□□□ -1.46
KCNC1-202ENST00000379472 HECTD4Q9Y4D8 3996 aa5.91□□□□□ -1.46
KCNC1-202ENST00000379472 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
KCNC1-202ENST00000379472 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
KCNC1-202ENST00000379472 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
KCNC1-202ENST00000379472 DNAH10Q8IVF4 4471 aa5.84□□□□□ -1.47
KCNC1-202ENST00000379472 DNAH8Q96JB1 4490 aa5.81□□□□□ -1.48
KCNC1-202ENST00000379472 MT1FP04733 61 aa5.8□□□□□ -1.48
KCNC1-202ENST00000379472 FAT2Q9NYQ8 4349 aa5.75□□□□□ -1.49
KCNC1-202ENST00000379472 MT1GP13640 62 aa5.75□□□□□ -1.49
KCNC1-202ENST00000379472 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
KCNC1-202ENST00000379472 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
KCNC1-202ENST00000379472 PRKDCP78527 4128 aaKnown RBP5.68□□□□□ -1.5
KCNC1-202ENST00000379472 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
KCNC1-202ENST00000379472 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
KCNC1-202ENST00000379472 PLECQ15149 4684 aaKnown RBP5.62□□□□□ -1.51
KCNC1-202ENST00000379472 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
KCNC1-202ENST00000379472 DYNC2H1Q8NCM8 4307 aaKnown RBP5.61□□□□□ -1.51
KCNC1-202ENST00000379472 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
KCNC1-202ENST00000379472 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
KCNC1-202ENST00000379472 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
KCNC1-202ENST00000379472 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
KCNC1-202ENST00000379472 DNAH17Q9UFH2 4485 aa5.5□□□□□ -1.53
KCNC1-202ENST00000379472 DNAH5Q8TE73 4624 aa5.48□□□□□ -1.53
KCNC1-202ENST00000379472 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
KCNC1-202ENST00000379472 MT4P47944 62 aa5.46□□□□□ -1.54
KCNC1-202ENST00000379472 LCE1BQ5T7P3 118 aa5.36□□□□□ -1.55
KCNC1-202ENST00000379472 LRP1BQ9NZR2 4599 aa5.35□□□□□ -1.55
KCNC1-202ENST00000379472 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
KCNC1-202ENST00000379472 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
KCNC1-202ENST00000379472 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
KCNC1-202ENST00000379472 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
KCNC1-202ENST00000379472 FAT1Q14517 4588 aa5.24□□□□□ -1.57
KCNC1-202ENST00000379472 MT1XP80297 61 aa5.24□□□□□ -1.57
KCNC1-202ENST00000379472 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
KCNC1-202ENST00000379472 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
KCNC1-202ENST00000379472 PKD1P98161 4303 aa5.18□□□□□ -1.58
KCNC1-202ENST00000379472 DNHD1Q96M86 4753 aa5.14□□□□□ -1.59
KCNC1-202ENST00000379472 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
KCNC1-202ENST00000379472 SACSQ9NZJ4 4579 aa5.11□□□□□ -1.59
KCNC1-202ENST00000379472 MT3P25713 68 aa5.11□□□□□ -1.59
KCNC1-202ENST00000379472 PRM1P04553 51 aa5.11□□□□□ -1.59
KCNC1-202ENST00000379472 DYNC1H1Q14204 4646 aaKnown RBP5.1□□□□□ -1.59
KCNC1-202ENST00000379472 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
KCNC1-202ENST00000379472 APOBP04114 4563 aaKnown RBP5.08□□□□□ -1.6
KCNC1-202ENST00000379472 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
KCNC1-202ENST00000379472 MT1BP07438 61 aa5.02□□□□□ -1.61
KCNC1-202ENST00000379472 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
KCNC1-202ENST00000379472 FAT3Q8TDW7 4589 aa4.98□□□□□ -1.61
KCNC1-202ENST00000379472 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
KCNC1-202ENST00000379472 MT1LQ93083 61 aa4.96□□□□□ -1.62
KCNC1-202ENST00000379472 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
KCNC1-202ENST00000379472 TNXBP22105 4242 aa4.95□□□□□ -1.62
KCNC1-202ENST00000379472 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
KCNC1-202ENST00000379472 MYCBP2O75592 4640 aa4.94□□□□□ -1.62
KCNC1-202ENST00000379472 LPAP08519 4548 aa4.93□□□□□ -1.62
KCNC1-202ENST00000379472 RYR1P21817 5038 aa4.9□□□□□ -1.62
KCNC1-202ENST00000379472 HSPG2P98160 4391 aa4.9□□□□□ -1.63
KCNC1-202ENST00000379472 LCE1CQ5T751 118 aa4.89□□□□□ -1.63
KCNC1-202ENST00000379472 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
KCNC1-202ENST00000379472 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
KCNC1-202ENST00000379472 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
KCNC1-202ENST00000379472 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
KCNC1-202ENST00000379472 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
KCNC1-202ENST00000379472 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
KCNC1-202ENST00000379472 MT1EP04732 61 aa4.81□□□□□ -1.64
KCNC1-202ENST00000379472 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
KCNC1-202ENST00000379472 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
KCNC1-202ENST00000379472 MT1MQ8N339 61 aa4.76□□□□□ -1.65
KCNC1-202ENST00000379472 HYDINQ4G0P3 5121 aa4.7□□□□□ -1.66
KCNC1-202ENST00000379472 KRTAP9-6A0A140TA67 174 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms