RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 MIR22HGQ0VDD5 57 aa11.09□□□□□ -0.63
CNTFR-202ENST00000378980 TPRXLQ17RH7 258 aa11□□□□□ -0.65
CNTFR-202ENST00000378980 KRTAP4-5Q9BYR2 181 aa11□□□□□ -0.65
CNTFR-202ENST00000378980 KTN1-AS1Q86SY8 53 aa10.98□□□□□ -0.65
CNTFR-202ENST00000378980 LRP2P98164 4655 aa10.9□□□□□ -0.67
CNTFR-202ENST00000378980 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
CNTFR-202ENST00000378980 A0A1B0GU33 70 aa10.87□□□□□ -0.67
CNTFR-202ENST00000378980 ABCA13Q86UQ4 5058 aa10.86□□□□□ -0.67
CNTFR-202ENST00000378980 H0YAA0 97 aa10.86□□□□□ -0.67
CNTFR-202ENST00000378980 H1FX-AS1Q4G0G2 97 aa10.86□□□□□ -0.67
CNTFR-202ENST00000378980 S4R3F8 94 aa10.85□□□□□ -0.67
CNTFR-202ENST00000378980 LPAP08519 4548 aa10.83□□□□□ -0.68
CNTFR-202ENST00000378980 KRTAP10-6P60371 365 aaPredicted RBP10.7□□□□□ -0.7
CNTFR-202ENST00000378980 RBM12B-AS1Q9P1G2 102 aa10.69□□□□□ -0.7
CNTFR-202ENST00000378980 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
CNTFR-202ENST00000378980 HERC2O95714 4834 aa10.66□□□□□ -0.7
CNTFR-202ENST00000378980 J3QL48 77 aa10.65□□□□□ -0.7
CNTFR-202ENST00000378980 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
CNTFR-202ENST00000378980 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.72
CNTFR-202ENST00000378980 PRAC1Q96KF2 57 aa10.57□□□□□ -0.72
CNTFR-202ENST00000378980 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
CNTFR-202ENST00000378980 P0C880 135 aa10.52□□□□□ -0.73
CNTFR-202ENST00000378980 KRTAP13-4Q3LI77 160 aa10.52□□□□□ -0.73
CNTFR-202ENST00000378980 CSAG1Q6PB30 78 aa10.51□□□□□ -0.73
CNTFR-202ENST00000378980 MUC17Q685J3 4493 aa10.5□□□□□ -0.73
CNTFR-202ENST00000378980 K7ERS5 55 aa10.42□□□□□ -0.74
CNTFR-202ENST00000378980 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
CNTFR-202ENST00000378980 A0A0D9SG42 100 aa10.36□□□□□ -0.75
CNTFR-202ENST00000378980 KRTAP19-2Q3LHN2 52 aa10.23□□□□□ -0.77
CNTFR-202ENST00000378980 M0QZ58 72 aa10.22□□□□□ -0.77
CNTFR-202ENST00000378980 KRTAP12-2P59991 146 aa10.14□□□□□ -0.79
CNTFR-202ENST00000378980 ROMO1P60602 79 aa10.14□□□□□ -0.79
CNTFR-202ENST00000378980 PCLOQ9Y6V0 5065 aa10.13□□□□□ -0.79
CNTFR-202ENST00000378980 LINC01554Q52M75 96 aa10.12□□□□□ -0.79
CNTFR-202ENST00000378980 KRTAP12-1P59990 96 aa10.11□□□□□ -0.79
CNTFR-202ENST00000378980 HERC1Q15751 4861 aa10.11□□□□□ -0.79
CNTFR-202ENST00000378980 KRTAP25-1Q3LHN0 102 aa10.08□□□□□ -0.8
CNTFR-202ENST00000378980 HMCN2Q8NDA2 5059 aa10.07□□□□□ -0.8
CNTFR-202ENST00000378980 SPINT4Q6UDR6 99 aa10.05□□□□□ -0.8
CNTFR-202ENST00000378980 R4GN34 69 aa10.03□□□□□ -0.8
CNTFR-202ENST00000378980 MUC2Q02817 5179 aa10.02□□□□□ -0.8
CNTFR-202ENST00000378980 FLGP20930 4061 aaPredicted RBP10.02□□□□□ -0.81
CNTFR-202ENST00000378980 CRIPTQ9P021 101 aa10.02□□□□□ -0.81
CNTFR-202ENST00000378980 LORP23490 312 aaPredicted RBP9.97□□□□□ -0.81
CNTFR-202ENST00000378980 LCE2CQ5TA81 110 aa9.75□□□□□ -0.85
CNTFR-202ENST00000378980 C10orf95Q9H7T3 257 aa9.71□□□□□ -0.85
CNTFR-202ENST00000378980 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
CNTFR-202ENST00000378980 FAT4Q6V0I7 4981 aa9.58□□□□□ -0.88
CNTFR-202ENST00000378980 UBR4Q5T4S7 5183 aa9.54□□□□□ -0.88
CNTFR-202ENST00000378980 MT1HP80294 61 aa9.5□□□□□ -0.89
CNTFR-202ENST00000378980 CAMK2N1Q7Z7J9 78 aa9.46□□□□□ -0.89
CNTFR-202ENST00000378980 M0R2T5 61 aa9.45□□□□□ -0.9
CNTFR-202ENST00000378980 SPRR2GQ9BYE4 73 aa9.36□□□□□ -0.91
CNTFR-202ENST00000378980 KRTAP19-1Q8IUB9 90 aa9.3□□□□□ -0.92
CNTFR-202ENST00000378980 MT2AP02795 61 aa9.27□□□□□ -0.93
CNTFR-202ENST00000378980 MT1FP04733 61 aa9.25□□□□□ -0.93
CNTFR-202ENST00000378980 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
CNTFR-202ENST00000378980 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
CNTFR-202ENST00000378980 PLAC4Q8WY50 150 aa9.16□□□□□ -0.94
CNTFR-202ENST00000378980 PP632Q6XCG6 107 aa9.13□□□□□ -0.95
CNTFR-202ENST00000378980 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
CNTFR-202ENST00000378980 TNP1P09430 55 aa9.09□□□□□ -0.95
CNTFR-202ENST00000378980 KRTAP19-8Q3LI54 63 aa9.01□□□□□ -0.97
CNTFR-202ENST00000378980 KRTAP23-1A1A580 65 aa8.95□□□□□ -0.98
CNTFR-202ENST00000378980 MT1BP07438 61 aa8.88□□□□□ -0.99
CNTFR-202ENST00000378980 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
CNTFR-202ENST00000378980 H3BS24 57 aa8.81□□□□□ -1
CNTFR-202ENST00000378980 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
CNTFR-202ENST00000378980 KRTAP10-5P60370 271 aa8.73□□□□□ -1.01
CNTFR-202ENST00000378980 MT1XP80297 61 aa8.73□□□□□ -1.01
CNTFR-202ENST00000378980 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
CNTFR-202ENST00000378980 LCE3AQ5TA76 89 aa8.65□□□□□ -1.02
CNTFR-202ENST00000378980 LCE2BO14633 110 aa8.55□□□□□ -1.04
CNTFR-202ENST00000378980 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
CNTFR-202ENST00000378980 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
CNTFR-202ENST00000378980 KRTAP10-12P60413 245 aa8.45□□□□□ -1.06
CNTFR-202ENST00000378980 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
CNTFR-202ENST00000378980 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
CNTFR-202ENST00000378980 SPRR5A0A1B0GTR4 108 aa8.39□□□□□ -1.07
CNTFR-202ENST00000378980 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
CNTFR-202ENST00000378980 USH2AO75445 5202 aa8.25□□□□□ -1.09
CNTFR-202ENST00000378980 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
CNTFR-202ENST00000378980 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.13
CNTFR-202ENST00000378980 KMT2DO14686 5537 aa7.96□□□□□ -1.13
CNTFR-202ENST00000378980 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.13
CNTFR-202ENST00000378980 SSPOA2VEC9 5147 aa7.96□□□□□ -1.14
CNTFR-202ENST00000378980 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
CNTFR-202ENST00000378980 KRTAP19-7Q3SYF9 63 aa7.79□□□□□ -1.16
CNTFR-202ENST00000378980 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
CNTFR-202ENST00000378980 LCE3CQ5T5A8 94 aa7.77□□□□□ -1.17
CNTFR-202ENST00000378980 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
CNTFR-202ENST00000378980 MT1EP04732 61 aa7.59□□□□□ -1.19
CNTFR-202ENST00000378980 FSIP2Q5CZC0 6907 aa7.58□□□□□ -1.2
CNTFR-202ENST00000378980 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
CNTFR-202ENST00000378980 MT1LQ93083 61 aa7.53□□□□□ -1.2
CNTFR-202ENST00000378980 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
CNTFR-202ENST00000378980 KRTAP9-6A8MVA2 160 aa7.43□□□□□ -1.22
CNTFR-202ENST00000378980 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
CNTFR-202ENST00000378980 KRTAP19-3Q7Z4W3 81 aa7.17□□□□□ -1.26
CNTFR-202ENST00000378980 MUC12Q9UKN1 5478 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms