RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 DNAH11Q96DT5 4516 aa9.84□□□□□ -0.83
SKI-201ENST00000378536 KRTAP13-4Q3LI77 160 aa9.83□□□□□ -0.84
SKI-201ENST00000378536 STARD9Q9P2P6 4700 aa9.81□□□□□ -0.84
SKI-201ENST00000378536 DNAH17Q9UFH2 4485 aa9.81□□□□□ -0.84
SKI-201ENST00000378536 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
SKI-201ENST00000378536 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
SKI-201ENST00000378536 PRKDCP78527 4128 aaKnown RBP9.72□□□□□ -0.85
SKI-201ENST00000378536 DYNC1H1Q14204 4646 aaKnown RBP9.67□□□□□ -0.86
SKI-201ENST00000378536 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
SKI-201ENST00000378536 DNAH3Q8TD57 4116 aa9.66□□□□□ -0.86
SKI-201ENST00000378536 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
SKI-201ENST00000378536 DNAH2Q9P225 4427 aa9.58□□□□□ -0.88
SKI-201ENST00000378536 DYNC2H1Q8NCM8 4307 aaKnown RBP9.54□□□□□ -0.88
SKI-201ENST00000378536 CMYA5Q8N3K9 4069 aa9.53□□□□□ -0.88
SKI-201ENST00000378536 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
SKI-201ENST00000378536 FAT1Q14517 4588 aa9.42□□□□□ -0.9
SKI-201ENST00000378536 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
SKI-201ENST00000378536 SACSQ9NZJ4 4579 aa9.36□□□□□ -0.91
SKI-201ENST00000378536 DNAH6Q9C0G6 4158 aa9.34□□□□□ -0.92
SKI-201ENST00000378536 KRTAP4-1Q9BYQ7 146 aa9.33□□□□□ -0.92
SKI-201ENST00000378536 RYR1P21817 5038 aa9.29□□□□□ -0.92
SKI-201ENST00000378536 DNAH8Q96JB1 4490 aa9.24□□□□□ -0.93
SKI-201ENST00000378536 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
SKI-201ENST00000378536 KRTAP15-1Q3LI76 137 aa9.22□□□□□ -0.93
SKI-201ENST00000378536 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
SKI-201ENST00000378536 MT1HP80294 61 aa9.12□□□□□ -0.95
SKI-201ENST00000378536 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
SKI-201ENST00000378536 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
SKI-201ENST00000378536 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
SKI-201ENST00000378536 LYSTQ99698 3801 aa9.04□□□□□ -0.96
SKI-201ENST00000378536 RYR3Q15413 4870 aa9.04□□□□□ -0.96
SKI-201ENST00000378536 RYR2Q92736 4967 aa9.02□□□□□ -0.97
SKI-201ENST00000378536 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
SKI-201ENST00000378536 APOBP04114 4563 aaKnown RBP8.98□□□□□ -0.97
SKI-201ENST00000378536 HECTD4Q9Y4D8 3996 aa8.95□□□□□ -0.98
SKI-201ENST00000378536 MT2AP02795 61 aa8.9□□□□□ -0.98
SKI-201ENST00000378536 KRTAP23-1A1A580 65 aa8.87□□□□□ -0.99
SKI-201ENST00000378536 KRTAP12-3P60328 96 aa8.85□□□□□ -0.99
SKI-201ENST00000378536 LCE3AQ5TA76 89 aa8.85□□□□□ -0.99
SKI-201ENST00000378536 HYDINQ4G0P3 5121 aa8.83□□□□□ -1
SKI-201ENST00000378536 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
SKI-201ENST00000378536 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
SKI-201ENST00000378536 MT1FP04733 61 aa8.74□□□□□ -1.01
SKI-201ENST00000378536 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
SKI-201ENST00000378536 BIRC6Q9NR09 4857 aa8.69□□□□□ -1.02
SKI-201ENST00000378536 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
SKI-201ENST00000378536 HSPG2P98160 4391 aa8.68□□□□□ -1.02
SKI-201ENST00000378536 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
SKI-201ENST00000378536 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
SKI-201ENST00000378536 CRCT1Q9UGL9 99 aa8.6□□□□□ -1.03
SKI-201ENST00000378536 HERC2O95714 4834 aa8.59□□□□□ -1.04
SKI-201ENST00000378536 PKHD1P08F94 4074 aa8.54□□□□□ -1.04
SKI-201ENST00000378536 PKD1P98161 4303 aa8.53□□□□□ -1.04
SKI-201ENST00000378536 INE1O15225 51 aa8.53□□□□□ -1.04
SKI-201ENST00000378536 KMT2CQ8NEZ4 4911 aaKnown RBP8.35□□□□□ -1.07
SKI-201ENST00000378536 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
SKI-201ENST00000378536 KRTAP19-8Q3LI54 63 aa8.26□□□□□ -1.09
SKI-201ENST00000378536 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
SKI-201ENST00000378536 HERC1Q15751 4861 aa8.23□□□□□ -1.09
SKI-201ENST00000378536 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
SKI-201ENST00000378536 LRP2P98164 4655 aa8.21□□□□□ -1.09
SKI-201ENST00000378536 KRTAP9-8Q9BYQ0 159 aa8.18□□□□□ -1.1
SKI-201ENST00000378536 TNXBP22105 4242 aa8.16□□□□□ -1.1
SKI-201ENST00000378536 PCLOQ9Y6V0 5065 aa8.11□□□□□ -1.11
SKI-201ENST00000378536 KRTAP19-5Q3LI72 72 aa8.11□□□□□ -1.11
SKI-201ENST00000378536 LPAP08519 4548 aa8.11□□□□□ -1.11
SKI-201ENST00000378536 SPRR2FQ96RM1 72 aa8.1□□□□□ -1.11
SKI-201ENST00000378536 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.11
SKI-201ENST00000378536 MT1BP07438 61 aa8.01□□□□□ -1.13
SKI-201ENST00000378536 KRTAP10-5P60370 271 aa8.01□□□□□ -1.13
SKI-201ENST00000378536 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
SKI-201ENST00000378536 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
SKI-201ENST00000378536 MT1XP80297 61 aa7.97□□□□□ -1.13
SKI-201ENST00000378536 KRTAP19-2Q3LHN2 52 aa7.96□□□□□ -1.14
SKI-201ENST00000378536 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.14
SKI-201ENST00000378536 LCE3CQ5T5A8 94 aa7.85□□□□□ -1.15
SKI-201ENST00000378536 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
SKI-201ENST00000378536 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
SKI-201ENST00000378536 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
SKI-201ENST00000378536 SPRR2EP22531 72 aa7.65□□□□□ -1.18
SKI-201ENST00000378536 SPRR2BP35325 72 aa7.65□□□□□ -1.18
SKI-201ENST00000378536 SPRR2AP35326 72 aa7.65□□□□□ -1.18
SKI-201ENST00000378536 LCE2BO14633 110 aa7.64□□□□□ -1.19
SKI-201ENST00000378536 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
SKI-201ENST00000378536 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
SKI-201ENST00000378536 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
SKI-201ENST00000378536 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
SKI-201ENST00000378536 FAT4Q6V0I7 4981 aa7.41□□□□□ -1.22
SKI-201ENST00000378536 SPRR2DP22532 72 aa7.4□□□□□ -1.22
SKI-201ENST00000378536 MT1GP13640 62 aa7.38□□□□□ -1.23
SKI-201ENST00000378536 HMCN2Q8NDA2 5059 aa7.32□□□□□ -1.24
SKI-201ENST00000378536 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
SKI-201ENST00000378536 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
SKI-201ENST00000378536 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
SKI-201ENST00000378536 KRTAP19-3Q7Z4W3 81 aa7.2□□□□□ -1.26
SKI-201ENST00000378536 UBR4Q5T4S7 5183 aa7.15□□□□□ -1.26
SKI-201ENST00000378536 MT1EP04732 61 aa7.15□□□□□ -1.26
SKI-201ENST00000378536 MT1LQ93083 61 aa7.13□□□□□ -1.27
SKI-201ENST00000378536 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
SKI-201ENST00000378536 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms