RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 MT2AP02795 61 aa10.69□□□□□ -0.7
CBWD1-203ENST00000377400 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
CBWD1-203ENST00000377400 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
CBWD1-203ENST00000377400 KRTAP10-10P60014 251 aa10.66□□□□□ -0.7
CBWD1-203ENST00000377400 CCDC179H3BU77 68 aa10.61□□□□□ -0.71
CBWD1-203ENST00000377400 MT1FP04733 61 aa10.61□□□□□ -0.71
CBWD1-203ENST00000377400 CYSTM1Q9H1C7 97 aa10.61□□□□□ -0.71
CBWD1-203ENST00000377400 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
CBWD1-203ENST00000377400 H7BZZ5 65 aa10.57□□□□□ -0.72
CBWD1-203ENST00000377400 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
CBWD1-203ENST00000377400 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.72
CBWD1-203ENST00000377400 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
CBWD1-203ENST00000377400 COA5Q86WW8 74 aa10.4□□□□□ -0.74
CBWD1-203ENST00000377400 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
CBWD1-203ENST00000377400 H0YAA0 97 aa10.38□□□□□ -0.75
CBWD1-203ENST00000377400 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
CBWD1-203ENST00000377400 FSIP2Q5CZC0 6907 aa10.29□□□□□ -0.76
CBWD1-203ENST00000377400 ATP5EP56381 51 aaPredicted RBP10.29□□□□□ -0.76
CBWD1-203ENST00000377400 TMEM258P61165 79 aa10.24□□□□□ -0.77
CBWD1-203ENST00000377400 LCE2BO14633 110 aa10.22□□□□□ -0.77
CBWD1-203ENST00000377400 CRIPTQ9P021 101 aa10.21□□□□□ -0.77
CBWD1-203ENST00000377400 P0C880 135 aa10.18□□□□□ -0.78
CBWD1-203ENST00000377400 USH2AO75445 5202 aa10.15□□□□□ -0.78
CBWD1-203ENST00000377400 KRTAP19-1Q8IUB9 90 aa10.14□□□□□ -0.79
CBWD1-203ENST00000377400 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
CBWD1-203ENST00000377400 PCP4P48539 62 aa10.12□□□□□ -0.79
CBWD1-203ENST00000377400 SPRR2GQ9BYE4 73 aa10.11□□□□□ -0.79
CBWD1-203ENST00000377400 R4GN34 69 aa10.1□□□□□ -0.79
CBWD1-203ENST00000377400 SEC61GP60059 68 aa10.07□□□□□ -0.8
CBWD1-203ENST00000377400 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
CBWD1-203ENST00000377400 M0QZ58 72 aa10.03□□□□□ -0.8
CBWD1-203ENST00000377400 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
CBWD1-203ENST00000377400 KRTAP9-6A0A140TA67 174 aa9.98□□□□□ -0.81
CBWD1-203ENST00000377400 Q5VV11 94 aa9.98□□□□□ -0.81
CBWD1-203ENST00000377400 SSPOA2VEC9 5147 aa9.95□□□□□ -0.82
CBWD1-203ENST00000377400 KRTAP19-8Q3LI54 63 aa9.93□□□□□ -0.82
CBWD1-203ENST00000377400 LINC01554Q52M75 96 aa9.91□□□□□ -0.82
CBWD1-203ENST00000377400 A0A1B0GU69 56 aa9.9□□□□□ -0.82
CBWD1-203ENST00000377400 MT1BP07438 61 aa9.86□□□□□ -0.83
CBWD1-203ENST00000377400 PRR15LQ9BU68 103 aa9.79□□□□□ -0.84
CBWD1-203ENST00000377400 A0A1B0GU33 70 aa9.78□□□□□ -0.84
CBWD1-203ENST00000377400 PLAC4Q8WY50 150 aa9.76□□□□□ -0.85
CBWD1-203ENST00000377400 KRTAP19-6Q3LI70 58 aa9.75□□□□□ -0.85
CBWD1-203ENST00000377400 LINC01558Q9Y6Z2 57 aa9.74□□□□□ -0.85
CBWD1-203ENST00000377400 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
CBWD1-203ENST00000377400 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
CBWD1-203ENST00000377400 A6NN06 94 aa9.63□□□□□ -0.87
CBWD1-203ENST00000377400 FCGBPQ9Y6R7 5405 aaPredicted RBP9.63□□□□□ -0.87
CBWD1-203ENST00000377400 A0A0D9SG42 100 aa9.61□□□□□ -0.87
CBWD1-203ENST00000377400 V9GYY9 64 aa9.59□□□□□ -0.87
CBWD1-203ENST00000377400 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
CBWD1-203ENST00000377400 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
CBWD1-203ENST00000377400 KRTAP10-5P60370 271 aa9.52□□□□□ -0.88
CBWD1-203ENST00000377400 Q1T7F1 81 aa9.51□□□□□ -0.89
CBWD1-203ENST00000377400 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
CBWD1-203ENST00000377400 PSPHP1O15172 72 aa9.48□□□□□ -0.89
CBWD1-203ENST00000377400 UQCR11O14957 56 aa9.45□□□□□ -0.9
CBWD1-203ENST00000377400 SPINT4Q6UDR6 99 aa9.45□□□□□ -0.9
CBWD1-203ENST00000377400 A8MU10 97 aa9.42□□□□□ -0.9
CBWD1-203ENST00000377400 MT1XP80297 61 aa9.41□□□□□ -0.9
CBWD1-203ENST00000377400 CAMK2N1Q7Z7J9 78 aa9.41□□□□□ -0.9
CBWD1-203ENST00000377400 MACF1Q9UPN3 7388 aaKnown RBP9.33□□□□□ -0.92
CBWD1-203ENST00000377400 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-203ENST00000377400 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
CBWD1-203ENST00000377400 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
CBWD1-203ENST00000377400 KRTAP12-2P59991 146 aa9.29□□□□□ -0.92
CBWD1-203ENST00000377400 A6NED7 52 aa9.22□□□□□ -0.93
CBWD1-203ENST00000377400 SYNE2Q8WXH0 6885 aaKnown RBP9.18□□□□□ -0.94
CBWD1-203ENST00000377400 K7ERS5 55 aa9.06□□□□□ -0.96
CBWD1-203ENST00000377400 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
CBWD1-203ENST00000377400 KRTAP10-7P60409 375 aaPredicted RBP9.02□□□□□ -0.97
CBWD1-203ENST00000377400 KMT2DO14686 5537 aa8.97□□□□□ -0.97
CBWD1-203ENST00000377400 KRTAP10-12P60413 245 aa8.93□□□□□ -0.98
CBWD1-203ENST00000377400 KRTAP6-3Q3LI67 103 aa8.89□□□□□ -0.99
CBWD1-203ENST00000377400 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
CBWD1-203ENST00000377400 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
CBWD1-203ENST00000377400 KRTAP8-1Q8IUC2 63 aa8.85□□□□□ -0.99
CBWD1-203ENST00000377400 KRTAP4-8A0A0G2JLE6 195 aa8.84□□□□□ -0.99
CBWD1-203ENST00000377400 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
CBWD1-203ENST00000377400 TNP1P09430 55 aa8.78□□□□□ -1
CBWD1-203ENST00000377400 KRTAP5-9P26371 169 aa8.7□□□□□ -1.02
CBWD1-203ENST00000377400 SPRR2FQ96RM1 72 aa8.69□□□□□ -1.02
CBWD1-203ENST00000377400 MUC12Q9UKN1 5478 aa8.64□□□□□ -1.03
CBWD1-203ENST00000377400 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
CBWD1-203ENST00000377400 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
CBWD1-203ENST00000377400 ROMO1P60602 79 aa8.5□□□□□ -1.05
CBWD1-203ENST00000377400 LCE3AQ5TA76 89 aa8.5□□□□□ -1.05
CBWD1-203ENST00000377400 MDN1Q9NU22 5596 aa8.49□□□□□ -1.05
CBWD1-203ENST00000377400 NEBP20929 6669 aa8.46□□□□□ -1.05
CBWD1-203ENST00000377400 SPRR2EP22531 72 aa8.42□□□□□ -1.06
CBWD1-203ENST00000377400 SPRR2BP35325 72 aa8.42□□□□□ -1.06
CBWD1-203ENST00000377400 SPRR2AP35326 72 aa8.42□□□□□ -1.06
CBWD1-203ENST00000377400 KRTAP19-5Q3LI72 72 aa8.39□□□□□ -1.07
CBWD1-203ENST00000377400 KRTAP19-7Q3SYF9 63 aa8.38□□□□□ -1.07
CBWD1-203ENST00000377400 LCE1AQ5T7P2 110 aa8.32□□□□□ -1.08
CBWD1-203ENST00000377400 MT1EP04732 61 aa8.3□□□□□ -1.08
CBWD1-203ENST00000377400 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
CBWD1-203ENST00000377400 KRTAP12-3P60328 96 aa8.18□□□□□ -1.1
CBWD1-203ENST00000377400 SPRR2DP22532 72 aa8.13□□□□□ -1.11
CBWD1-203ENST00000377400 KRTAP19-3Q7Z4W3 81 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms