RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
MDC1-201ENST00000376406 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
MDC1-201ENST00000376406 CMYA5Q8N3K9 4069 aa4.82□□□□□ -1.64
MDC1-201ENST00000376406 VPS13DQ5THJ4 4388 aa4.78□□□□□ -1.64
MDC1-201ENST00000376406 DNAH10Q8IVF4 4471 aa4.78□□□□□ -1.64
MDC1-201ENST00000376406 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
MDC1-201ENST00000376406 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
MDC1-201ENST00000376406 INE1O15225 51 aa4.76□□□□□ -1.65
MDC1-201ENST00000376406 PLECQ15149 4684 aaKnown RBP4.75□□□□□ -1.65
MDC1-201ENST00000376406 DNAH2Q9P225 4427 aa4.75□□□□□ -1.65
MDC1-201ENST00000376406 DNAH7Q8WXX0 4024 aa4.73□□□□□ -1.65
MDC1-201ENST00000376406 ANK2Q01484 3957 aa4.73□□□□□ -1.65
MDC1-201ENST00000376406 DNAH11Q96DT5 4516 aa4.71□□□□□ -1.66
MDC1-201ENST00000376406 DYNC2H1Q8NCM8 4307 aaKnown RBP4.68□□□□□ -1.66
MDC1-201ENST00000376406 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
MDC1-201ENST00000376406 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
MDC1-201ENST00000376406 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
MDC1-201ENST00000376406 KMT2AQ03164 3969 aa4.64□□□□□ -1.67
MDC1-201ENST00000376406 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
MDC1-201ENST00000376406 FRAS1Q86XX4 4008 aa4.64□□□□□ -1.67
MDC1-201ENST00000376406 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
MDC1-201ENST00000376406 PRKDCP78527 4128 aaKnown RBP4.62□□□□□ -1.67
MDC1-201ENST00000376406 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
MDC1-201ENST00000376406 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
MDC1-201ENST00000376406 HECTD4Q9Y4D8 3996 aa4.6□□□□□ -1.67
MDC1-201ENST00000376406 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
MDC1-201ENST00000376406 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
MDC1-201ENST00000376406 LYSTQ99698 3801 aa4.53□□□□□ -1.68
MDC1-201ENST00000376406 MT1HP80294 61 aa4.53□□□□□ -1.68
MDC1-201ENST00000376406 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
MDC1-201ENST00000376406 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
MDC1-201ENST00000376406 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
MDC1-201ENST00000376406 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
MDC1-201ENST00000376406 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
MDC1-201ENST00000376406 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
MDC1-201ENST00000376406 DYNC1H1Q14204 4646 aaKnown RBP4.43□□□□□ -1.7
MDC1-201ENST00000376406 MT2AP02795 61 aa4.39□□□□□ -1.71
MDC1-201ENST00000376406 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
MDC1-201ENST00000376406 MT1FP04733 61 aa4.26□□□□□ -1.73
MDC1-201ENST00000376406 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
MDC1-201ENST00000376406 FAT1Q14517 4588 aa4.25□□□□□ -1.73
MDC1-201ENST00000376406 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
MDC1-201ENST00000376406 APOBP04114 4563 aaKnown RBP4.2□□□□□ -1.74
MDC1-201ENST00000376406 PKHD1L1Q86WI1 4243 aa4.18□□□□□ -1.74
MDC1-201ENST00000376406 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
MDC1-201ENST00000376406 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
MDC1-201ENST00000376406 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
MDC1-201ENST00000376406 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
MDC1-201ENST00000376406 FAT3Q8TDW7 4589 aa4.13□□□□□ -1.75
MDC1-201ENST00000376406 PKD1P98161 4303 aa4.12□□□□□ -1.75
MDC1-201ENST00000376406 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
MDC1-201ENST00000376406 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
MDC1-201ENST00000376406 HSPG2P98160 4391 aa4.08□□□□□ -1.76
MDC1-201ENST00000376406 TNXBP22105 4242 aa4.08□□□□□ -1.76
MDC1-201ENST00000376406 SPRR2EP22531 72 aa4.07□□□□□ -1.76
MDC1-201ENST00000376406 SPRR2BP35325 72 aa4.07□□□□□ -1.76
MDC1-201ENST00000376406 SPRR2AP35326 72 aa4.07□□□□□ -1.76
MDC1-201ENST00000376406 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
MDC1-201ENST00000376406 RYR1P21817 5038 aa4□□□□□ -1.77
MDC1-201ENST00000376406 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
MDC1-201ENST00000376406 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
MDC1-201ENST00000376406 LCE2BO14633 110 aa3.99□□□□□ -1.77
MDC1-201ENST00000376406 MT1XP80297 61 aa3.98□□□□□ -1.77
MDC1-201ENST00000376406 RYR3Q15413 4870 aa3.97□□□□□ -1.77
MDC1-201ENST00000376406 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
MDC1-201ENST00000376406 SPRR2DP22532 72 aa3.96□□□□□ -1.77
MDC1-201ENST00000376406 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
MDC1-201ENST00000376406 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
MDC1-201ENST00000376406 HYDINQ4G0P3 5121 aa3.93□□□□□ -1.78
MDC1-201ENST00000376406 MT1BP07438 61 aa3.91□□□□□ -1.78
MDC1-201ENST00000376406 RYR2Q92736 4967 aa3.9□□□□□ -1.78
MDC1-201ENST00000376406 MT1GP13640 62 aa3.89□□□□□ -1.79
MDC1-201ENST00000376406 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
MDC1-201ENST00000376406 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
MDC1-201ENST00000376406 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
MDC1-201ENST00000376406 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
MDC1-201ENST00000376406 LPAP08519 4548 aa3.86□□□□□ -1.79
MDC1-201ENST00000376406 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
MDC1-201ENST00000376406 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
MDC1-201ENST00000376406 HERC1Q15751 4861 aa3.73□□□□□ -1.81
MDC1-201ENST00000376406 LRP2P98164 4655 aa3.72□□□□□ -1.81
MDC1-201ENST00000376406 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
MDC1-201ENST00000376406 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
MDC1-201ENST00000376406 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
MDC1-201ENST00000376406 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
MDC1-201ENST00000376406 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
MDC1-201ENST00000376406 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
MDC1-201ENST00000376406 MT1LQ93083 61 aa3.66□□□□□ -1.82
MDC1-201ENST00000376406 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
MDC1-201ENST00000376406 KMT2CQ8NEZ4 4911 aaKnown RBP3.61□□□□□ -1.83
MDC1-201ENST00000376406 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.84
MDC1-201ENST00000376406 MT1EP04732 61 aa3.57□□□□□ -1.84
MDC1-201ENST00000376406 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
MDC1-201ENST00000376406 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
MDC1-201ENST00000376406 HERC2O95714 4834 aa3.54□□□□□ -1.84
MDC1-201ENST00000376406 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
MDC1-201ENST00000376406 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
MDC1-201ENST00000376406 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
MDC1-201ENST00000376406 MT3P25713 68 aa3.47□□□□□ -1.85
MDC1-201ENST00000376406 MT1MQ8N339 61 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms