RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 HECTD4Q9Y4D8 3996 aa7.47□□□□□ -1.21
SHC3-202ENST00000375835 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
SHC3-202ENST00000375835 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
SHC3-202ENST00000375835 CSMD2Q7Z408 3487 aa7.38□□□□□ -1.23
SHC3-202ENST00000375835 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
SHC3-202ENST00000375835 ZNF469Q96JG9 3925 aaPredicted RBP7.32□□□□□ -1.24
SHC3-202ENST00000375835 ANK2Q01484 3957 aa7.31□□□□□ -1.24
SHC3-202ENST00000375835 DNAH6Q9C0G6 4158 aa7.24□□□□□ -1.25
SHC3-202ENST00000375835 KRTAP10-4P60372 401 aaPredicted RBP7.24□□□□□ -1.25
SHC3-202ENST00000375835 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
SHC3-202ENST00000375835 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
SHC3-202ENST00000375835 DNAH2Q9P225 4427 aa7.14□□□□□ -1.27
SHC3-202ENST00000375835 DNAH1Q9P2D7 4330 aa7.09□□□□□ -1.28
SHC3-202ENST00000375835 KMT2AQ03164 3969 aa7.04□□□□□ -1.28
SHC3-202ENST00000375835 VPS13BQ7Z7G8 4022 aa7.02□□□□□ -1.29
SHC3-202ENST00000375835 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
SHC3-202ENST00000375835 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
SHC3-202ENST00000375835 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
SHC3-202ENST00000375835 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
SHC3-202ENST00000375835 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
SHC3-202ENST00000375835 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
SHC3-202ENST00000375835 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
SHC3-202ENST00000375835 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
SHC3-202ENST00000375835 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
SHC3-202ENST00000375835 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
SHC3-202ENST00000375835 MT1HP80294 61 aa6.6□□□□□ -1.35
SHC3-202ENST00000375835 MT2AP02795 61 aa6.52□□□□□ -1.36
SHC3-202ENST00000375835 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
SHC3-202ENST00000375835 DNAH10Q8IVF4 4471 aa6.48□□□□□ -1.37
SHC3-202ENST00000375835 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
SHC3-202ENST00000375835 KRTAP12-4P60329 112 aa6.44□□□□□ -1.38
SHC3-202ENST00000375835 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
SHC3-202ENST00000375835 FAT2Q9NYQ8 4349 aa6.37□□□□□ -1.39
SHC3-202ENST00000375835 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
SHC3-202ENST00000375835 MT1FP04733 61 aa6.33□□□□□ -1.4
SHC3-202ENST00000375835 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
SHC3-202ENST00000375835 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
SHC3-202ENST00000375835 DYNC2H1Q8NCM8 4307 aaKnown RBP6.3□□□□□ -1.4
SHC3-202ENST00000375835 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
SHC3-202ENST00000375835 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
SHC3-202ENST00000375835 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
SHC3-202ENST00000375835 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.42
SHC3-202ENST00000375835 DNAH8Q96JB1 4490 aa6.14□□□□□ -1.43
SHC3-202ENST00000375835 MT3P25713 68 aa6.12□□□□□ -1.43
SHC3-202ENST00000375835 LCE3EQ5T5B0 92 aa6.11□□□□□ -1.43
SHC3-202ENST00000375835 DNAH17Q9UFH2 4485 aa6.1□□□□□ -1.43
SHC3-202ENST00000375835 MT1XP80297 61 aa6.1□□□□□ -1.43
SHC3-202ENST00000375835 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
SHC3-202ENST00000375835 SPRR2EP22531 72 aa6.04□□□□□ -1.44
SHC3-202ENST00000375835 SPRR2BP35325 72 aa6.04□□□□□ -1.44
SHC3-202ENST00000375835 SPRR2AP35326 72 aa6.04□□□□□ -1.44
SHC3-202ENST00000375835 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
SHC3-202ENST00000375835 MT1GP13640 62 aa6.01□□□□□ -1.45
SHC3-202ENST00000375835 LCE2BO14633 110 aa6.01□□□□□ -1.45
SHC3-202ENST00000375835 STARD9Q9P2P6 4700 aa5.97□□□□□ -1.45
SHC3-202ENST00000375835 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
SHC3-202ENST00000375835 SPRR2DP22532 72 aa5.92□□□□□ -1.46
SHC3-202ENST00000375835 MT1LQ93083 61 aa5.86□□□□□ -1.47
SHC3-202ENST00000375835 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
SHC3-202ENST00000375835 PLECQ15149 4684 aaKnown RBP5.78□□□□□ -1.48
SHC3-202ENST00000375835 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
SHC3-202ENST00000375835 PKD1P98161 4303 aa5.73□□□□□ -1.49
SHC3-202ENST00000375835 MT1BP07438 61 aa5.72□□□□□ -1.49
SHC3-202ENST00000375835 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
SHC3-202ENST00000375835 HSPG2P98160 4391 aa5.67□□□□□ -1.5
SHC3-202ENST00000375835 PRM1P04553 51 aa5.66□□□□□ -1.5
SHC3-202ENST00000375835 MT1EP04732 61 aa5.64□□□□□ -1.51
SHC3-202ENST00000375835 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
SHC3-202ENST00000375835 TNXBP22105 4242 aa5.59□□□□□ -1.52
SHC3-202ENST00000375835 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
SHC3-202ENST00000375835 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
SHC3-202ENST00000375835 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
SHC3-202ENST00000375835 LRP1BQ9NZR2 4599 aa5.49□□□□□ -1.53
SHC3-202ENST00000375835 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.54
SHC3-202ENST00000375835 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
SHC3-202ENST00000375835 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
SHC3-202ENST00000375835 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SHC3-202ENST00000375835 LCE2DQ5TA82 110 aaPredicted RBP5.34□□□□□ -1.55
SHC3-202ENST00000375835 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
SHC3-202ENST00000375835 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
SHC3-202ENST00000375835 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
SHC3-202ENST00000375835 FAT1Q14517 4588 aa5.31□□□□□ -1.56
SHC3-202ENST00000375835 MT1AP04731 61 aa5.29□□□□□ -1.56
SHC3-202ENST00000375835 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
SHC3-202ENST00000375835 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
SHC3-202ENST00000375835 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
SHC3-202ENST00000375835 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
SHC3-202ENST00000375835 MT4P47944 62 aa5.06□□□□□ -1.6
SHC3-202ENST00000375835 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
SHC3-202ENST00000375835 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
SHC3-202ENST00000375835 MYCBP2O75592 4640 aa4.99□□□□□ -1.61
SHC3-202ENST00000375835 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
SHC3-202ENST00000375835 RYR1P21817 5038 aa4.94□□□□□ -1.62
SHC3-202ENST00000375835 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
SHC3-202ENST00000375835 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
SHC3-202ENST00000375835 RYR3Q15413 4870 aa4.86□□□□□ -1.63
SHC3-202ENST00000375835 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
SHC3-202ENST00000375835 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
SHC3-202ENST00000375835 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
SHC3-202ENST00000375835 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms