RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 FAT3Q8TDW7 4589 aa6.59□□□□□ -1.35
UBR4-203ENST00000375225 FLG2Q5D862 2391 aaPredicted RBP6.58□□□□□ -1.36
UBR4-203ENST00000375225 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
UBR4-203ENST00000375225 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
UBR4-203ENST00000375225 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
UBR4-203ENST00000375225 TNXBP22105 4242 aa6.55□□□□□ -1.36
UBR4-203ENST00000375225 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
UBR4-203ENST00000375225 HERC2O95714 4834 aa6.53□□□□□ -1.36
UBR4-203ENST00000375225 COX6B2Q6YFQ2 88 aa6.52□□□□□ -1.37
UBR4-203ENST00000375225 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
UBR4-203ENST00000375225 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
UBR4-203ENST00000375225 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
UBR4-203ENST00000375225 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
UBR4-203ENST00000375225 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
UBR4-203ENST00000375225 A0A1B0GU33 70 aa6.41□□□□□ -1.38
UBR4-203ENST00000375225 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
UBR4-203ENST00000375225 XP32Q5T750 250 aa6.39□□□□□ -1.39
UBR4-203ENST00000375225 K7ERS5 55 aa6.35□□□□□ -1.39
UBR4-203ENST00000375225 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
UBR4-203ENST00000375225 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
UBR4-203ENST00000375225 S4R3F8 94 aa6.32□□□□□ -1.4
UBR4-203ENST00000375225 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
UBR4-203ENST00000375225 H0YAA0 97 aa6.3□□□□□ -1.4
UBR4-203ENST00000375225 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
UBR4-203ENST00000375225 SEC61BP60468 96 aaKnown RBP6.2□□□□□ -1.42
UBR4-203ENST00000375225 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
UBR4-203ENST00000375225 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
UBR4-203ENST00000375225 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
UBR4-203ENST00000375225 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
UBR4-203ENST00000375225 LPAP08519 4548 aa6.1□□□□□ -1.43
UBR4-203ENST00000375225 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
UBR4-203ENST00000375225 LRP2P98164 4655 aa6.08□□□□□ -1.44
UBR4-203ENST00000375225 HERC1Q15751 4861 aa6.05□□□□□ -1.44
UBR4-203ENST00000375225 ROMO1P60602 79 aa6.04□□□□□ -1.44
UBR4-203ENST00000375225 M0QZ58 72 aa6.04□□□□□ -1.44
UBR4-203ENST00000375225 HMCN2Q8NDA2 5059 aa6.03□□□□□ -1.44
UBR4-203ENST00000375225 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
UBR4-203ENST00000375225 A0A0D9SG42 100 aa6.02□□□□□ -1.45
UBR4-203ENST00000375225 P0C880 135 aa6.01□□□□□ -1.45
UBR4-203ENST00000375225 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
UBR4-203ENST00000375225 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
UBR4-203ENST00000375225 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
UBR4-203ENST00000375225 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
UBR4-203ENST00000375225 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
UBR4-203ENST00000375225 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
UBR4-203ENST00000375225 CRIPTQ9P021 101 aa5.85□□□□□ -1.47
UBR4-203ENST00000375225 R4GN34 69 aa5.85□□□□□ -1.47
UBR4-203ENST00000375225 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
UBR4-203ENST00000375225 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
UBR4-203ENST00000375225 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
UBR4-203ENST00000375225 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
UBR4-203ENST00000375225 MUC2Q02817 5179 aa5.71□□□□□ -1.5
UBR4-203ENST00000375225 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
UBR4-203ENST00000375225 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
UBR4-203ENST00000375225 M0R2T5 61 aa5.56□□□□□ -1.52
UBR4-203ENST00000375225 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
UBR4-203ENST00000375225 MT1HP80294 61 aa5.54□□□□□ -1.52
UBR4-203ENST00000375225 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
UBR4-203ENST00000375225 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
UBR4-203ENST00000375225 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
UBR4-203ENST00000375225 TNP1P09430 55 aa5.37□□□□□ -1.55
UBR4-203ENST00000375225 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
UBR4-203ENST00000375225 MT2AP02795 61 aa5.33□□□□□ -1.56
UBR4-203ENST00000375225 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
UBR4-203ENST00000375225 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
UBR4-203ENST00000375225 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
UBR4-203ENST00000375225 MT1FP04733 61 aa5.28□□□□□ -1.56
UBR4-203ENST00000375225 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
UBR4-203ENST00000375225 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
UBR4-203ENST00000375225 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
UBR4-203ENST00000375225 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
UBR4-203ENST00000375225 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
UBR4-203ENST00000375225 MT1BP07438 61 aa4.99□□□□□ -1.61
UBR4-203ENST00000375225 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
UBR4-203ENST00000375225 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
UBR4-203ENST00000375225 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
UBR4-203ENST00000375225 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
UBR4-203ENST00000375225 KRTAP10-5P60370 271 aa4.9□□□□□ -1.63
UBR4-203ENST00000375225 MT1XP80297 61 aa4.9□□□□□ -1.63
UBR4-203ENST00000375225 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
UBR4-203ENST00000375225 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
UBR4-203ENST00000375225 USH2AO75445 5202 aa4.85□□□□□ -1.63
UBR4-203ENST00000375225 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
UBR4-203ENST00000375225 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
UBR4-203ENST00000375225 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
UBR4-203ENST00000375225 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
UBR4-203ENST00000375225 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
UBR4-203ENST00000375225 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
UBR4-203ENST00000375225 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
UBR4-203ENST00000375225 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
UBR4-203ENST00000375225 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
UBR4-203ENST00000375225 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
UBR4-203ENST00000375225 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
UBR4-203ENST00000375225 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
UBR4-203ENST00000375225 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
UBR4-203ENST00000375225 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
UBR4-203ENST00000375225 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
UBR4-203ENST00000375225 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
UBR4-203ENST00000375225 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
UBR4-203ENST00000375225 INE1O15225 51 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms