RNA–Protein interactions for RNA: ENST00000374672.4

KLF4-201, Transcript of Kruppel like factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF4, Length 2,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-201ENST00000374672 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
KLF4-201ENST00000374672 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
KLF4-201ENST00000374672 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
KLF4-201ENST00000374672 SPINT4Q6UDR6 99 aa7.97□□□□□ -1.13
KLF4-201ENST00000374672 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
KLF4-201ENST00000374672 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
KLF4-201ENST00000374672 KRTAP4-5Q9BYR2 181 aa7.93□□□□□ -1.14
KLF4-201ENST00000374672 PCLOQ9Y6V0 5065 aa7.93□□□□□ -1.14
KLF4-201ENST00000374672 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.14
KLF4-201ENST00000374672 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
KLF4-201ENST00000374672 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
KLF4-201ENST00000374672 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
KLF4-201ENST00000374672 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
KLF4-201ENST00000374672 KRTAP15-1Q3LI76 137 aa7.85□□□□□ -1.15
KLF4-201ENST00000374672 HERC2O95714 4834 aa7.83□□□□□ -1.16
KLF4-201ENST00000374672 RPS29P62273 56 aaKnown RBP7.81□□□□□ -1.16
KLF4-201ENST00000374672 Q5VSD8 79 aa7.79□□□□□ -1.16
KLF4-201ENST00000374672 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
KLF4-201ENST00000374672 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
KLF4-201ENST00000374672 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
KLF4-201ENST00000374672 A0A0D9SG42 100 aa7.75□□□□□ -1.17
KLF4-201ENST00000374672 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
KLF4-201ENST00000374672 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
KLF4-201ENST00000374672 KRTAP10-4P60372 401 aaPredicted RBP7.71□□□□□ -1.18
KLF4-201ENST00000374672 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
KLF4-201ENST00000374672 HERC1Q15751 4861 aa7.68□□□□□ -1.18
KLF4-201ENST00000374672 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.19
KLF4-201ENST00000374672 FAT3Q8TDW7 4589 aa7.63□□□□□ -1.19
KLF4-201ENST00000374672 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
KLF4-201ENST00000374672 S4R3F8 94 aa7.62□□□□□ -1.19
KLF4-201ENST00000374672 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
KLF4-201ENST00000374672 TNXBP22105 4242 aa7.53□□□□□ -1.2
KLF4-201ENST00000374672 XP32Q5T750 250 aa7.51□□□□□ -1.21
KLF4-201ENST00000374672 KRTAP12-1P59990 96 aa7.46□□□□□ -1.21
KLF4-201ENST00000374672 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
KLF4-201ENST00000374672 J3QL48 77 aa7.41□□□□□ -1.22
KLF4-201ENST00000374672 LUZP6Q538Z0 58 aa7.41□□□□□ -1.22
KLF4-201ENST00000374672 LPAP08519 4548 aa7.4□□□□□ -1.22
KLF4-201ENST00000374672 LRP2P98164 4655 aa7.35□□□□□ -1.23
KLF4-201ENST00000374672 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
KLF4-201ENST00000374672 M0QZ58 72 aa7.3□□□□□ -1.24
KLF4-201ENST00000374672 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
KLF4-201ENST00000374672 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
KLF4-201ENST00000374672 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
KLF4-201ENST00000374672 HMCN2Q8NDA2 5059 aa7.25□□□□□ -1.25
KLF4-201ENST00000374672 MUC2Q02817 5179 aa7.24□□□□□ -1.25
KLF4-201ENST00000374672 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
KLF4-201ENST00000374672 R4GN34 69 aa6.98□□□□□ -1.29
KLF4-201ENST00000374672 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
KLF4-201ENST00000374672 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
KLF4-201ENST00000374672 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
KLF4-201ENST00000374672 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
KLF4-201ENST00000374672 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
KLF4-201ENST00000374672 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
KLF4-201ENST00000374672 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
KLF4-201ENST00000374672 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
KLF4-201ENST00000374672 TNP1P09430 55 aa6.53□□□□□ -1.36
KLF4-201ENST00000374672 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
KLF4-201ENST00000374672 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
KLF4-201ENST00000374672 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
KLF4-201ENST00000374672 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
KLF4-201ENST00000374672 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.4
KLF4-201ENST00000374672 INE1O15225 51 aa6.33□□□□□ -1.4
KLF4-201ENST00000374672 M0R2T5 61 aa6.29□□□□□ -1.4
KLF4-201ENST00000374672 MT1HP80294 61 aa6.29□□□□□ -1.4
KLF4-201ENST00000374672 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
KLF4-201ENST00000374672 USH2AO75445 5202 aa6.14□□□□□ -1.43
KLF4-201ENST00000374672 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
KLF4-201ENST00000374672 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
KLF4-201ENST00000374672 MT1FP04733 61 aa5.98□□□□□ -1.45
KLF4-201ENST00000374672 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
KLF4-201ENST00000374672 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
KLF4-201ENST00000374672 MT2AP02795 61 aa5.96□□□□□ -1.46
KLF4-201ENST00000374672 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
KLF4-201ENST00000374672 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
KLF4-201ENST00000374672 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
KLF4-201ENST00000374672 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
KLF4-201ENST00000374672 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
KLF4-201ENST00000374672 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
KLF4-201ENST00000374672 LCE2BO14633 110 aa5.77□□□□□ -1.49
KLF4-201ENST00000374672 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
KLF4-201ENST00000374672 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
KLF4-201ENST00000374672 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
KLF4-201ENST00000374672 MT1XP80297 61 aa5.6□□□□□ -1.51
KLF4-201ENST00000374672 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
KLF4-201ENST00000374672 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
KLF4-201ENST00000374672 KMT2DO14686 5537 aa5.53□□□□□ -1.52
KLF4-201ENST00000374672 MT1BP07438 61 aa5.52□□□□□ -1.53
KLF4-201ENST00000374672 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
KLF4-201ENST00000374672 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
KLF4-201ENST00000374672 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
KLF4-201ENST00000374672 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
KLF4-201ENST00000374672 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
KLF4-201ENST00000374672 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
KLF4-201ENST00000374672 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
KLF4-201ENST00000374672 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
KLF4-201ENST00000374672 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
KLF4-201ENST00000374672 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
KLF4-201ENST00000374672 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
KLF4-201ENST00000374672 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms