RNA–Protein interactions for RNA: ENST00000374672.4

KLF4-201, Transcript of Kruppel like factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF4, Length 2,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-201ENST00000374672 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
KLF4-201ENST00000374672 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
KLF4-201ENST00000374672 ABCC9O60706 1549 aa25.38■■□□□ 1.65
KLF4-201ENST00000374672 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
KLF4-201ENST00000374672 HRCP23327 699 aa25.15■■□□□ 1.62
KLF4-201ENST00000374672 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
KLF4-201ENST00000374672 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
KLF4-201ENST00000374672 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
KLF4-201ENST00000374672 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
KLF4-201ENST00000374672 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
KLF4-201ENST00000374672 SUPT5HO00267 1087 aaKnown RBP24.29■■□□□ 1.48
KLF4-201ENST00000374672 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
KLF4-201ENST00000374672 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
KLF4-201ENST00000374672 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
KLF4-201ENST00000374672 NACADO15069 1562 aa24.07■■□□□ 1.44
KLF4-201ENST00000374672 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
KLF4-201ENST00000374672 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
KLF4-201ENST00000374672 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
KLF4-201ENST00000374672 MYT1Q01538 1121 aa23.84■■□□□ 1.41
KLF4-201ENST00000374672 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
KLF4-201ENST00000374672 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
KLF4-201ENST00000374672 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
KLF4-201ENST00000374672 ZEB1P37275 1124 aaPredicted RBP23.67■■□□□ 1.38
KLF4-201ENST00000374672 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
KLF4-201ENST00000374672 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
KLF4-201ENST00000374672 ACIN1Q9UKV3 1341 aaKnown RBP23.25■■□□□ 1.31
KLF4-201ENST00000374672 CECR2Q9BXF3 1484 aa23.19■■□□□ 1.3
KLF4-201ENST00000374672 NEUROD1Q13562 356 aa23.11■■□□□ 1.29
KLF4-201ENST00000374672 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
KLF4-201ENST00000374672 GTF3C3Q9Y5Q9 886 aa23■■□□□ 1.27
KLF4-201ENST00000374672 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
KLF4-201ENST00000374672 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
KLF4-201ENST00000374672 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
KLF4-201ENST00000374672 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
KLF4-201ENST00000374672 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
KLF4-201ENST00000374672 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
KLF4-201ENST00000374672 DIEXFQ68CQ4 756 aaKnown RBP22.72■■□□□ 1.23
KLF4-201ENST00000374672 WIZO95785 1651 aa22.69■■□□□ 1.22
KLF4-201ENST00000374672 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
KLF4-201ENST00000374672 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
KLF4-201ENST00000374672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
KLF4-201ENST00000374672 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
KLF4-201ENST00000374672 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
KLF4-201ENST00000374672 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
KLF4-201ENST00000374672 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
KLF4-201ENST00000374672 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
KLF4-201ENST00000374672 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
KLF4-201ENST00000374672 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
KLF4-201ENST00000374672 ZNF316A6NFI3 1004 aaPredicted RBP22.27■■□□□ 1.16
KLF4-201ENST00000374672 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
KLF4-201ENST00000374672 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
KLF4-201ENST00000374672 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
KLF4-201ENST00000374672 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
KLF4-201ENST00000374672 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.14
KLF4-201ENST00000374672 HMGXB3Q12766 1538 aa22.14■■□□□ 1.14
KLF4-201ENST00000374672 NESP48681 1621 aa22.13■■□□□ 1.13
KLF4-201ENST00000374672 MIER1Q8N108 512 aa22.08■■□□□ 1.13
KLF4-201ENST00000374672 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
KLF4-201ENST00000374672 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
KLF4-201ENST00000374672 ANP32EQ9BTT0 268 aa22.03■■□□□ 1.12
KLF4-201ENST00000374672 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
KLF4-201ENST00000374672 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
KLF4-201ENST00000374672 TSHZ2Q9NRE2 1034 aa21.85■■□□□ 1.09
KLF4-201ENST00000374672 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.09
KLF4-201ENST00000374672 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
KLF4-201ENST00000374672 CFTRP13569 1480 aa21.72■■□□□ 1.07
KLF4-201ENST00000374672 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
KLF4-201ENST00000374672 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
KLF4-201ENST00000374672 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
KLF4-201ENST00000374672 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.06
KLF4-201ENST00000374672 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.06
KLF4-201ENST00000374672 LAMC3Q9Y6N6 1575 aa21.6■■□□□ 1.05
KLF4-201ENST00000374672 TNIKQ9UKE5 1360 aa21.58■■□□□ 1.04
KLF4-201ENST00000374672 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
KLF4-201ENST00000374672 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
KLF4-201ENST00000374672 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
KLF4-201ENST00000374672 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
KLF4-201ENST00000374672 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
KLF4-201ENST00000374672 CUX1P39880 1505 aa21.39■■□□□ 1.01
KLF4-201ENST00000374672 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
KLF4-201ENST00000374672 EEA1Q15075 1411 aa21.34■■□□□ 1.01
KLF4-201ENST00000374672 MRC2Q9UBG0 1479 aa21.33■■□□□ 1
KLF4-201ENST00000374672 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
KLF4-201ENST00000374672 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
KLF4-201ENST00000374672 RBM19Q9Y4C8 960 aaKnown RBP21.32■■□□□ 1
KLF4-201ENST00000374672 TOPBP1Q92547 1522 aa21.32■■□□□ 1
KLF4-201ENST00000374672 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
KLF4-201ENST00000374672 SOGA1O94964 1423 aa21.29■■□□□ 1
KLF4-201ENST00000374672 BCANQ96GW7 911 aa21.27■□□□□ 0.99
KLF4-201ENST00000374672 PRKCSHP14314 528 aaPredicted RBP21.26■□□□□ 0.99
KLF4-201ENST00000374672 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
KLF4-201ENST00000374672 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
KLF4-201ENST00000374672 FKBP8Q14318 412 aa21.23■□□□□ 0.99
KLF4-201ENST00000374672 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
KLF4-201ENST00000374672 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
KLF4-201ENST00000374672 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
KLF4-201ENST00000374672 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
KLF4-201ENST00000374672 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
KLF4-201ENST00000374672 CUX2O14529 1486 aa21.18■□□□□ 0.98
KLF4-201ENST00000374672 WDR62O43379 1518 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 246.6 ms