RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 KRTAP10-8P60410 259 aa10.52□□□□□ -0.72
SUSD1-204ENST00000374270 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
SUSD1-204ENST00000374270 TNXBP22105 4242 aa10.51□□□□□ -0.73
SUSD1-204ENST00000374270 SPATA8Q6RVD6 105 aa10.46□□□□□ -0.74
SUSD1-204ENST00000374270 XP32Q5T750 250 aa10.43□□□□□ -0.74
SUSD1-204ENST00000374270 COX6B2Q6YFQ2 88 aa10.43□□□□□ -0.74
SUSD1-204ENST00000374270 LPAP08519 4548 aa10.39□□□□□ -0.75
SUSD1-204ENST00000374270 A0A1B0GU33 70 aa10.37□□□□□ -0.75
SUSD1-204ENST00000374270 LRP2P98164 4655 aa10.37□□□□□ -0.75
SUSD1-204ENST00000374270 RPL37P61927 97 aaKnown RBP10.35□□□□□ -0.75
SUSD1-204ENST00000374270 H0YAA0 97 aa10.33□□□□□ -0.76
SUSD1-204ENST00000374270 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
SUSD1-204ENST00000374270 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
SUSD1-204ENST00000374270 ABCA13Q86UQ4 5058 aa10.3□□□□□ -0.76
SUSD1-204ENST00000374270 A0A0D9SG42 100 aa10.29□□□□□ -0.76
SUSD1-204ENST00000374270 H1FX-AS1Q4G0G2 97 aa10.25□□□□□ -0.77
SUSD1-204ENST00000374270 CRIPTQ9P021 101 aa10.2□□□□□ -0.78
SUSD1-204ENST00000374270 ROMO1P60602 79 aa10.2□□□□□ -0.78
SUSD1-204ENST00000374270 S4R3F8 94 aa10.19□□□□□ -0.78
SUSD1-204ENST00000374270 A0A0A0MQY5 61 aa10.18□□□□□ -0.78
SUSD1-204ENST00000374270 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
SUSD1-204ENST00000374270 P0C880 135 aa10.07□□□□□ -0.8
SUSD1-204ENST00000374270 J3QL48 77 aa10.04□□□□□ -0.8
SUSD1-204ENST00000374270 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
SUSD1-204ENST00000374270 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
SUSD1-204ENST00000374270 K7ERS5 55 aa9.98□□□□□ -0.81
SUSD1-204ENST00000374270 HERC2O95714 4834 aa9.94□□□□□ -0.82
SUSD1-204ENST00000374270 KRTAP25-1Q3LHN0 102 aa9.94□□□□□ -0.82
SUSD1-204ENST00000374270 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
SUSD1-204ENST00000374270 TPRXLQ17RH7 258 aa9.91□□□□□ -0.82
SUSD1-204ENST00000374270 MUC2Q02817 5179 aa9.9□□□□□ -0.82
SUSD1-204ENST00000374270 SPINT4Q6UDR6 99 aa9.9□□□□□ -0.82
SUSD1-204ENST00000374270 NDUFAF8A1L188 74 aa9.77□□□□□ -0.85
SUSD1-204ENST00000374270 KRTAP4-1Q9BYQ7 146 aa9.71□□□□□ -0.86
SUSD1-204ENST00000374270 KRTAP12-2P59991 146 aa9.7□□□□□ -0.86
SUSD1-204ENST00000374270 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
SUSD1-204ENST00000374270 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
SUSD1-204ENST00000374270 M0QZ58 72 aa9.65□□□□□ -0.87
SUSD1-204ENST00000374270 HERC1Q15751 4861 aa9.64□□□□□ -0.87
SUSD1-204ENST00000374270 R4GN34 69 aa9.58□□□□□ -0.88
SUSD1-204ENST00000374270 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
SUSD1-204ENST00000374270 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
SUSD1-204ENST00000374270 PCLOQ9Y6V0 5065 aa9.49□□□□□ -0.89
SUSD1-204ENST00000374270 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
SUSD1-204ENST00000374270 BIRC6Q9NR09 4857 aa9.46□□□□□ -0.89
SUSD1-204ENST00000374270 FAT4Q6V0I7 4981 aa9.41□□□□□ -0.9
SUSD1-204ENST00000374270 RNF213Q63HN8 5207 aa9.37□□□□□ -0.91
SUSD1-204ENST00000374270 LUZP6Q538Z0 58 aa9.31□□□□□ -0.92
SUSD1-204ENST00000374270 KRTAP15-1Q3LI76 137 aa9.28□□□□□ -0.92
SUSD1-204ENST00000374270 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
SUSD1-204ENST00000374270 CAMK2N1Q7Z7J9 78 aa9.18□□□□□ -0.94
SUSD1-204ENST00000374270 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
SUSD1-204ENST00000374270 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
SUSD1-204ENST00000374270 M0R2T5 61 aa9.14□□□□□ -0.95
SUSD1-204ENST00000374270 FLGP20930 4061 aaPredicted RBP9.03□□□□□ -0.96
SUSD1-204ENST00000374270 LCE2CQ5TA81 110 aa8.8□□□□□ -1
SUSD1-204ENST00000374270 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
SUSD1-204ENST00000374270 MT1HP80294 61 aa8.67□□□□□ -1.02
SUSD1-204ENST00000374270 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
SUSD1-204ENST00000374270 TNP1P09430 55 aa8.58□□□□□ -1.04
SUSD1-204ENST00000374270 MT1FP04733 61 aa8.56□□□□□ -1.04
SUSD1-204ENST00000374270 KRTAP19-1Q8IUB9 90 aa8.54□□□□□ -1.04
SUSD1-204ENST00000374270 MT2AP02795 61 aa8.5□□□□□ -1.05
SUSD1-204ENST00000374270 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
SUSD1-204ENST00000374270 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
SUSD1-204ENST00000374270 PP632Q6XCG6 107 aa8.37□□□□□ -1.07
SUSD1-204ENST00000374270 USH2AO75445 5202 aa8.35□□□□□ -1.07
SUSD1-204ENST00000374270 LCE3AQ5TA76 89 aa8.23□□□□□ -1.09
SUSD1-204ENST00000374270 MT1BP07438 61 aa8.12□□□□□ -1.11
SUSD1-204ENST00000374270 KMT2DO14686 5537 aa8.08□□□□□ -1.12
SUSD1-204ENST00000374270 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
SUSD1-204ENST00000374270 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
SUSD1-204ENST00000374270 MT1XP80297 61 aa8.03□□□□□ -1.12
SUSD1-204ENST00000374270 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
SUSD1-204ENST00000374270 KRTAP19-8Q3LI54 63 aa8□□□□□ -1.13
SUSD1-204ENST00000374270 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.14
SUSD1-204ENST00000374270 KRTAP10-12P60413 245 aa7.9□□□□□ -1.14
SUSD1-204ENST00000374270 LCE2BO14633 110 aa7.87□□□□□ -1.15
SUSD1-204ENST00000374270 KRTAP23-1A1A580 65 aa7.86□□□□□ -1.15
SUSD1-204ENST00000374270 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
SUSD1-204ENST00000374270 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
SUSD1-204ENST00000374270 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
SUSD1-204ENST00000374270 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
SUSD1-204ENST00000374270 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
SUSD1-204ENST00000374270 LCE2AQ5TA79 106 aaPredicted RBP7.63□□□□□ -1.19
SUSD1-204ENST00000374270 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
SUSD1-204ENST00000374270 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
SUSD1-204ENST00000374270 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
SUSD1-204ENST00000374270 INE1O15225 51 aa7.39□□□□□ -1.23
SUSD1-204ENST00000374270 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
SUSD1-204ENST00000374270 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
SUSD1-204ENST00000374270 MUC12Q9UKN1 5478 aa7.18□□□□□ -1.26
SUSD1-204ENST00000374270 KRTAP19-7Q3SYF9 63 aa7.14□□□□□ -1.27
SUSD1-204ENST00000374270 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
SUSD1-204ENST00000374270 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
SUSD1-204ENST00000374270 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
SUSD1-204ENST00000374270 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
SUSD1-204ENST00000374270 MT1EP04732 61 aa6.94□□□□□ -1.3
SUSD1-204ENST00000374270 MT1LQ93083 61 aa6.92□□□□□ -1.3
SUSD1-204ENST00000374270 KRTAP4-3Q9BYR4 195 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms