RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
PGK1-201ENST00000373316 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
PGK1-201ENST00000373316 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
PGK1-201ENST00000373316 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
PGK1-201ENST00000373316 ADM2Q7Z4H4 148 aa5.87□□□□□ -1.47
PGK1-201ENST00000373316 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
PGK1-201ENST00000373316 HSPG2P98160 4391 aa5.81□□□□□ -1.48
PGK1-201ENST00000373316 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
PGK1-201ENST00000373316 H3BS24 57 aa5.78□□□□□ -1.48
PGK1-201ENST00000373316 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
PGK1-201ENST00000373316 M0R2T5 61 aa5.77□□□□□ -1.48
PGK1-201ENST00000373316 A0A1B0GVY2 172 aa5.76□□□□□ -1.49
PGK1-201ENST00000373316 KRTAP17-1Q9BYP8 105 aa5.76□□□□□ -1.49
PGK1-201ENST00000373316 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
PGK1-201ENST00000373316 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
PGK1-201ENST00000373316 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
PGK1-201ENST00000373316 DMBT1Q9UGM3 2413 aaPredicted RBP5.71□□□□□ -1.49
PGK1-201ENST00000373316 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
PGK1-201ENST00000373316 RYR1P21817 5038 aa5.71□□□□□ -1.5
PGK1-201ENST00000373316 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
PGK1-201ENST00000373316 TPRXLQ17RH7 258 aa5.65□□□□□ -1.5
PGK1-201ENST00000373316 A8MU10 97 aa5.64□□□□□ -1.51
PGK1-201ENST00000373316 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
PGK1-201ENST00000373316 XP32Q5T750 250 aa5.61□□□□□ -1.51
PGK1-201ENST00000373316 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
PGK1-201ENST00000373316 TNP1P09430 55 aa5.59□□□□□ -1.51
PGK1-201ENST00000373316 TNXBP22105 4242 aa5.59□□□□□ -1.52
PGK1-201ENST00000373316 KRTAP4-5Q9BYR2 181 aa5.58□□□□□ -1.52
PGK1-201ENST00000373316 H0YAA0 97 aa5.54□□□□□ -1.52
PGK1-201ENST00000373316 LPAP08519 4548 aa5.54□□□□□ -1.52
PGK1-201ENST00000373316 HERC2O95714 4834 aa5.5□□□□□ -1.53
PGK1-201ENST00000373316 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
PGK1-201ENST00000373316 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
PGK1-201ENST00000373316 HERC1Q15751 4861 aa5.44□□□□□ -1.54
PGK1-201ENST00000373316 LRP2P98164 4655 aa5.43□□□□□ -1.54
PGK1-201ENST00000373316 P0C880 135 aa5.41□□□□□ -1.54
PGK1-201ENST00000373316 MUC2Q02817 5179 aa5.39□□□□□ -1.55
PGK1-201ENST00000373316 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
PGK1-201ENST00000373316 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
PGK1-201ENST00000373316 MT1HL1P0DM35 61 aa5.34□□□□□ -1.56
PGK1-201ENST00000373316 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
PGK1-201ENST00000373316 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
PGK1-201ENST00000373316 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
PGK1-201ENST00000373316 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
PGK1-201ENST00000373316 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
PGK1-201ENST00000373316 UBR4Q5T4S7 5183 aa5.17□□□□□ -1.58
PGK1-201ENST00000373316 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
PGK1-201ENST00000373316 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
PGK1-201ENST00000373316 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
PGK1-201ENST00000373316 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
PGK1-201ENST00000373316 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
PGK1-201ENST00000373316 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
PGK1-201ENST00000373316 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
PGK1-201ENST00000373316 MUC17Q685J3 4493 aa5□□□□□ -1.61
PGK1-201ENST00000373316 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
PGK1-201ENST00000373316 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
PGK1-201ENST00000373316 KRTAP3-3Q9BYR6 98 aa4.92□□□□□ -1.62
PGK1-201ENST00000373316 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
PGK1-201ENST00000373316 INE1O15225 51 aa4.84□□□□□ -1.63
PGK1-201ENST00000373316 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
PGK1-201ENST00000373316 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
PGK1-201ENST00000373316 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
PGK1-201ENST00000373316 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
PGK1-201ENST00000373316 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
PGK1-201ENST00000373316 USH2AO75445 5202 aa4.56□□□□□ -1.68
PGK1-201ENST00000373316 FSIP2Q5CZC0 6907 aa4.55□□□□□ -1.68
PGK1-201ENST00000373316 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
PGK1-201ENST00000373316 MT1HP80294 61 aa4.51□□□□□ -1.69
PGK1-201ENST00000373316 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
PGK1-201ENST00000373316 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
PGK1-201ENST00000373316 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
PGK1-201ENST00000373316 MT1FP04733 61 aa4.39□□□□□ -1.71
PGK1-201ENST00000373316 MT2AP02795 61 aa4.35□□□□□ -1.71
PGK1-201ENST00000373316 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.72
PGK1-201ENST00000373316 KMT2DO14686 5537 aa4.27□□□□□ -1.73
PGK1-201ENST00000373316 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
PGK1-201ENST00000373316 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
PGK1-201ENST00000373316 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
PGK1-201ENST00000373316 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
PGK1-201ENST00000373316 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
PGK1-201ENST00000373316 LCE2BO14633 110 aa4.13□□□□□ -1.75
PGK1-201ENST00000373316 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
PGK1-201ENST00000373316 MT1BP07438 61 aa4.1□□□□□ -1.75
PGK1-201ENST00000373316 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
PGK1-201ENST00000373316 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
PGK1-201ENST00000373316 MT1XP80297 61 aa4□□□□□ -1.77
PGK1-201ENST00000373316 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
PGK1-201ENST00000373316 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
PGK1-201ENST00000373316 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
PGK1-201ENST00000373316 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
PGK1-201ENST00000373316 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
PGK1-201ENST00000373316 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
PGK1-201ENST00000373316 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
PGK1-201ENST00000373316 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
PGK1-201ENST00000373316 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
PGK1-201ENST00000373316 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
PGK1-201ENST00000373316 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
PGK1-201ENST00000373316 MT1GP13640 62 aa3.71□□□□□ -1.82
PGK1-201ENST00000373316 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
PGK1-201ENST00000373316 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms