RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 CSMD2Q7Z408 3487 aa3.73□□□□□ -1.81
PTPRT-205ENST00000373193 ANK3Q12955 4377 aaKnown RBP3.7□□□□□ -1.82
PTPRT-205ENST00000373193 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
PTPRT-205ENST00000373193 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
PTPRT-205ENST00000373193 LYSTQ99698 3801 aa3.66□□□□□ -1.82
PTPRT-205ENST00000373193 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.84
PTPRT-205ENST00000373193 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.84
PTPRT-205ENST00000373193 CMYA5Q8N3K9 4069 aa3.58□□□□□ -1.84
PTPRT-205ENST00000373193 KRTAP10-4P60372 401 aaPredicted RBP3.57□□□□□ -1.84
PTPRT-205ENST00000373193 DNAH7Q8WXX0 4024 aa3.56□□□□□ -1.84
PTPRT-205ENST00000373193 DNAH3Q8TD57 4116 aa3.56□□□□□ -1.84
PTPRT-205ENST00000373193 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
PTPRT-205ENST00000373193 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
PTPRT-205ENST00000373193 ANK2Q01484 3957 aa3.52□□□□□ -1.85
PTPRT-205ENST00000373193 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
PTPRT-205ENST00000373193 ZNF469Q96JG9 3925 aaPredicted RBP3.51□□□□□ -1.85
PTPRT-205ENST00000373193 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
PTPRT-205ENST00000373193 HECTD4Q9Y4D8 3996 aa3.5□□□□□ -1.85
PTPRT-205ENST00000373193 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
PTPRT-205ENST00000373193 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
PTPRT-205ENST00000373193 DNAH6Q9C0G6 4158 aa3.44□□□□□ -1.86
PTPRT-205ENST00000373193 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
PTPRT-205ENST00000373193 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
PTPRT-205ENST00000373193 MT1HP80294 61 aa3.38□□□□□ -1.87
PTPRT-205ENST00000373193 MT2AP02795 61 aa3.37□□□□□ -1.87
PTPRT-205ENST00000373193 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
PTPRT-205ENST00000373193 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.87
PTPRT-205ENST00000373193 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
PTPRT-205ENST00000373193 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
PTPRT-205ENST00000373193 MT1FP04733 61 aa3.33□□□□□ -1.88
PTPRT-205ENST00000373193 DNAH10Q8IVF4 4471 aa3.32□□□□□ -1.88
PTPRT-205ENST00000373193 MT1GP13640 62 aa3.31□□□□□ -1.88
PTPRT-205ENST00000373193 DNAH8Q96JB1 4490 aa3.3□□□□□ -1.88
PTPRT-205ENST00000373193 DNAH17Q9UFH2 4485 aa3.28□□□□□ -1.88
PTPRT-205ENST00000373193 SPRR2EP22531 72 aa3.26□□□□□ -1.89
PTPRT-205ENST00000373193 SPRR2BP35325 72 aa3.26□□□□□ -1.89
PTPRT-205ENST00000373193 SPRR2AP35326 72 aa3.26□□□□□ -1.89
PTPRT-205ENST00000373193 DNAH9Q9NYC9 4486 aa3.26□□□□□ -1.89
PTPRT-205ENST00000373193 VPS13DQ5THJ4 4388 aa3.24□□□□□ -1.89
PTPRT-205ENST00000373193 FAT2Q9NYQ8 4349 aa3.2□□□□□ -1.9
PTPRT-205ENST00000373193 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
PTPRT-205ENST00000373193 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
PTPRT-205ENST00000373193 DYNC2H1Q8NCM8 4307 aaKnown RBP3.16□□□□□ -1.9
PTPRT-205ENST00000373193 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
PTPRT-205ENST00000373193 SPRR2DP22532 72 aa3.15□□□□□ -1.91
PTPRT-205ENST00000373193 PLECQ15149 4684 aaKnown RBP3.14□□□□□ -1.91
PTPRT-205ENST00000373193 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
PTPRT-205ENST00000373193 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
PTPRT-205ENST00000373193 FAT1Q14517 4588 aa3.12□□□□□ -1.91
PTPRT-205ENST00000373193 MT1XP80297 61 aa3.1□□□□□ -1.91
PTPRT-205ENST00000373193 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
PTPRT-205ENST00000373193 LCE2BO14633 110 aa3.1□□□□□ -1.91
PTPRT-205ENST00000373193 STARD9Q9P2P6 4700 aa3.09□□□□□ -1.91
PTPRT-205ENST00000373193 PRM1P04553 51 aa3.08□□□□□ -1.92
PTPRT-205ENST00000373193 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
PTPRT-205ENST00000373193 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
PTPRT-205ENST00000373193 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
PTPRT-205ENST00000373193 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
PTPRT-205ENST00000373193 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
PTPRT-205ENST00000373193 KRTAP19-1Q8IUB9 90 aa3.02□□□□□ -1.93
PTPRT-205ENST00000373193 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
PTPRT-205ENST00000373193 KRTAP4-7Q9BYR0 210 aa3.01□□□□□ -1.93
PTPRT-205ENST00000373193 PKHD1P08F94 4074 aa3□□□□□ -1.93
PTPRT-205ENST00000373193 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
PTPRT-205ENST00000373193 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
PTPRT-205ENST00000373193 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
PTPRT-205ENST00000373193 LCE2CQ5TA81 110 aa2.94□□□□□ -1.94
PTPRT-205ENST00000373193 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
PTPRT-205ENST00000373193 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
PTPRT-205ENST00000373193 MT1BP07438 61 aa2.92□□□□□ -1.94
PTPRT-205ENST00000373193 MT4P47944 62 aa2.91□□□□□ -1.94
PTPRT-205ENST00000373193 LOC100996750A0A140TA64 210 aa2.91□□□□□ -1.94
PTPRT-205ENST00000373193 MYCBP2O75592 4640 aa2.89□□□□□ -1.95
PTPRT-205ENST00000373193 LCE2DQ5TA82 110 aaPredicted RBP2.88□□□□□ -1.95
PTPRT-205ENST00000373193 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
PTPRT-205ENST00000373193 MT1LQ93083 61 aa2.86□□□□□ -1.95
PTPRT-205ENST00000373193 PKD1P98161 4303 aa2.86□□□□□ -1.95
PTPRT-205ENST00000373193 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
PTPRT-205ENST00000373193 FAT3Q8TDW7 4589 aa2.82□□□□□ -1.96
PTPRT-205ENST00000373193 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
PTPRT-205ENST00000373193 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
PTPRT-205ENST00000373193 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
PTPRT-205ENST00000373193 RYR1P21817 5038 aa2.79□□□□□ -1.96
PTPRT-205ENST00000373193 MT1EP04732 61 aa2.79□□□□□ -1.96
PTPRT-205ENST00000373193 KRTAP17-1Q9BYP8 105 aa2.78□□□□□ -1.96
PTPRT-205ENST00000373193 TNXBP22105 4242 aa2.78□□□□□ -1.96
PTPRT-205ENST00000373193 MT3P25713 68 aa2.78□□□□□ -1.96
PTPRT-205ENST00000373193 KRTAP9-3Q9BYQ3 159 aa2.76□□□□□ -1.97
PTPRT-205ENST00000373193 RYR3Q15413 4870 aa2.76□□□□□ -1.97
PTPRT-205ENST00000373193 DNHD1Q96M86 4753 aa2.75□□□□□ -1.97
PTPRT-205ENST00000373193 HSPG2P98160 4391 aa2.75□□□□□ -1.97
PTPRT-205ENST00000373193 MT1MQ8N339 61 aa2.74□□□□□ -1.97
PTPRT-205ENST00000373193 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
PTPRT-205ENST00000373193 LRP2P98164 4655 aa2.62□□□□□ -1.99
PTPRT-205ENST00000373193 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
PTPRT-205ENST00000373193 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
PTPRT-205ENST00000373193 LPAP08519 4548 aa2.61□□□□□ -1.99
PTPRT-205ENST00000373193 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -2
PTPRT-205ENST00000373193 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -2
PTPRT-205ENST00000373193 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms