RNA–Protein interactions for RNA: ENST00000373187.5

PTPRT-203, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRT, Length 12,453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-203ENST00000373187 LYSTQ99698 3801 aa2.62□□□□□ -1.99
PTPRT-203ENST00000373187 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
PTPRT-203ENST00000373187 ASPMQ8IZT6 3477 aa2.61□□□□□ -1.99
PTPRT-203ENST00000373187 MUC3AQ02505 3323 aa2.61□□□□□ -1.99
PTPRT-203ENST00000373187 DNAH6Q9C0G6 4158 aa2.58□□□□□ -2
PTPRT-203ENST00000373187 KRTAP19-4Q3LI73 84 aa2.56□□□□□ -2
PTPRT-203ENST00000373187 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
PTPRT-203ENST00000373187 SVEP1Q4LDE5 3571 aa2.52□□□□□ -2.01
PTPRT-203ENST00000373187 CRCT1Q9UGL9 99 aa2.52□□□□□ -2.01
PTPRT-203ENST00000373187 CSMD3Q7Z407 3707 aa2.52□□□□□ -2.01
PTPRT-203ENST00000373187 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
PTPRT-203ENST00000373187 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
PTPRT-203ENST00000373187 LCE3AQ5TA76 89 aa2.51□□□□□ -2.01
PTPRT-203ENST00000373187 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
PTPRT-203ENST00000373187 DNAH11Q96DT5 4516 aa2.48□□□□□ -2.01
PTPRT-203ENST00000373187 VPS13BQ7Z7G8 4022 aa2.48□□□□□ -2.01
PTPRT-203ENST00000373187 CSMD2Q7Z408 3487 aa2.48□□□□□ -2.01
PTPRT-203ENST00000373187 KRTAP4-5Q9BYR2 181 aa2.46□□□□□ -2.02
PTPRT-203ENST00000373187 RYR1P21817 5038 aa2.45□□□□□ -2.02
PTPRT-203ENST00000373187 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
PTPRT-203ENST00000373187 DNAH5Q8TE73 4624 aa2.43□□□□□ -2.02
PTPRT-203ENST00000373187 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
PTPRT-203ENST00000373187 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
PTPRT-203ENST00000373187 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.02
PTPRT-203ENST00000373187 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
PTPRT-203ENST00000373187 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
PTPRT-203ENST00000373187 DNAH9Q9NYC9 4486 aa2.38□□□□□ -2.03
PTPRT-203ENST00000373187 LORP23490 312 aaPredicted RBP2.37□□□□□ -2.03
PTPRT-203ENST00000373187 MT1HP80294 61 aa2.37□□□□□ -2.03
PTPRT-203ENST00000373187 VPS13DQ5THJ4 4388 aa2.37□□□□□ -2.03
PTPRT-203ENST00000373187 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
PTPRT-203ENST00000373187 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
PTPRT-203ENST00000373187 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
PTPRT-203ENST00000373187 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
PTPRT-203ENST00000373187 MT2AP02795 61 aa2.33□□□□□ -2.04
PTPRT-203ENST00000373187 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
PTPRT-203ENST00000373187 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
PTPRT-203ENST00000373187 RYR3Q15413 4870 aa2.31□□□□□ -2.04
PTPRT-203ENST00000373187 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
PTPRT-203ENST00000373187 STARD9Q9P2P6 4700 aa2.31□□□□□ -2.04
PTPRT-203ENST00000373187 MT3P25713 68 aa2.31□□□□□ -2.04
PTPRT-203ENST00000373187 PKHD1P08F94 4074 aa2.3□□□□□ -2.04
PTPRT-203ENST00000373187 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
PTPRT-203ENST00000373187 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.04
PTPRT-203ENST00000373187 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
PTPRT-203ENST00000373187 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
PTPRT-203ENST00000373187 KRTAP4-1Q9BYQ7 146 aa2.27□□□□□ -2.05
PTPRT-203ENST00000373187 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
PTPRT-203ENST00000373187 MT1FP04733 61 aa2.26□□□□□ -2.05
PTPRT-203ENST00000373187 DNHD1Q96M86 4753 aa2.24□□□□□ -2.05
PTPRT-203ENST00000373187 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
PTPRT-203ENST00000373187 SACSQ9NZJ4 4579 aa2.22□□□□□ -2.05
PTPRT-203ENST00000373187 RYR2Q92736 4967 aa2.19□□□□□ -2.06
PTPRT-203ENST00000373187 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
PTPRT-203ENST00000373187 PKD1P98161 4303 aa2.17□□□□□ -2.06
PTPRT-203ENST00000373187 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
PTPRT-203ENST00000373187 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
PTPRT-203ENST00000373187 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
PTPRT-203ENST00000373187 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
PTPRT-203ENST00000373187 KRTAP19-1Q8IUB9 90 aa2.13□□□□□ -2.07
PTPRT-203ENST00000373187 MT1XP80297 61 aa2.12□□□□□ -2.07
PTPRT-203ENST00000373187 SPRR2EP22531 72 aa2.12□□□□□ -2.07
PTPRT-203ENST00000373187 SPRR2BP35325 72 aa2.12□□□□□ -2.07
PTPRT-203ENST00000373187 SPRR2AP35326 72 aa2.12□□□□□ -2.07
PTPRT-203ENST00000373187 MT1GP13640 62 aa2.12□□□□□ -2.07
PTPRT-203ENST00000373187 HSPG2P98160 4391 aa2.1□□□□□ -2.07
PTPRT-203ENST00000373187 LCE2BO14633 110 aa2.1□□□□□ -2.07
PTPRT-203ENST00000373187 FAT3Q8TDW7 4589 aa2.1□□□□□ -2.07
PTPRT-203ENST00000373187 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
PTPRT-203ENST00000373187 FAT1Q14517 4588 aa2.09□□□□□ -2.07
PTPRT-203ENST00000373187 SPRR2DP22532 72 aa2.09□□□□□ -2.07
PTPRT-203ENST00000373187 KRTAP17-1Q9BYP8 105 aa2.08□□□□□ -2.08
PTPRT-203ENST00000373187 LCE3BQ5TA77 95 aa2.07□□□□□ -2.08
PTPRT-203ENST00000373187 MT1BP07438 61 aa2.04□□□□□ -2.08
PTPRT-203ENST00000373187 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
PTPRT-203ENST00000373187 HERC2O95714 4834 aa2.04□□□□□ -2.08
PTPRT-203ENST00000373187 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
PTPRT-203ENST00000373187 KRTAP9-8Q9BYQ0 159 aa2.03□□□□□ -2.08
PTPRT-203ENST00000373187 RNF213Q63HN8 5207 aa2.03□□□□□ -2.08
PTPRT-203ENST00000373187 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
PTPRT-203ENST00000373187 TNXBP22105 4242 aa2.02□□□□□ -2.09
PTPRT-203ENST00000373187 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
PTPRT-203ENST00000373187 HERC1Q15751 4861 aa2.02□□□□□ -2.09
PTPRT-203ENST00000373187 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
PTPRT-203ENST00000373187 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
PTPRT-203ENST00000373187 MT1LQ93083 61 aa2□□□□□ -2.09
PTPRT-203ENST00000373187 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
PTPRT-203ENST00000373187 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
PTPRT-203ENST00000373187 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
PTPRT-203ENST00000373187 LCE2CQ5TA81 110 aa1.94□□□□□ -2.1
PTPRT-203ENST00000373187 MT1EP04732 61 aa1.93□□□□□ -2.1
PTPRT-203ENST00000373187 UBR4Q5T4S7 5183 aa1.91□□□□□ -2.1
PTPRT-203ENST00000373187 LRP2P98164 4655 aa1.91□□□□□ -2.1
PTPRT-203ENST00000373187 KRTAP4-8A0A0G2JLE6 195 aa1.9□□□□□ -2.11
PTPRT-203ENST00000373187 KRTAP4-8Q9BYQ9 185 aa1.9□□□□□ -2.11
PTPRT-203ENST00000373187 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
PTPRT-203ENST00000373187 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
PTPRT-203ENST00000373187 LCE2DQ5TA82 110 aaPredicted RBP1.88□□□□□ -2.11
PTPRT-203ENST00000373187 MT1MQ8N339 61 aa1.88□□□□□ -2.11
PTPRT-203ENST00000373187 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms