RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
PABPC4-204ENST00000372862 MIR22HGQ0VDD5 57 aa10.42□□□□□ -0.74
PABPC4-204ENST00000372862 J3QL48 77 aa10.34□□□□□ -0.75
PABPC4-204ENST00000372862 ABCA13Q86UQ4 5058 aa10.31□□□□□ -0.76
PABPC4-204ENST00000372862 LRP2P98164 4655 aa10.31□□□□□ -0.76
PABPC4-204ENST00000372862 S4R3F8 94 aa10.31□□□□□ -0.76
PABPC4-204ENST00000372862 A6NN06 94 aa10.29□□□□□ -0.76
PABPC4-204ENST00000372862 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
PABPC4-204ENST00000372862 LPAP08519 4548 aa10.27□□□□□ -0.77
PABPC4-204ENST00000372862 H1FX-AS1Q4G0G2 97 aa10.26□□□□□ -0.77
PABPC4-204ENST00000372862 A0A1B0GU33 70 aa10.26□□□□□ -0.77
PABPC4-204ENST00000372862 RBM12B-AS1Q9P1G2 102 aa10.24□□□□□ -0.77
PABPC4-204ENST00000372862 SEC61BP60468 96 aaKnown RBP10.19□□□□□ -0.78
PABPC4-204ENST00000372862 HERC2O95714 4834 aa10.18□□□□□ -0.78
PABPC4-204ENST00000372862 H0YAA0 97 aa10.16□□□□□ -0.78
PABPC4-204ENST00000372862 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
PABPC4-204ENST00000372862 KTN1-AS1Q86SY8 53 aa10.14□□□□□ -0.79
PABPC4-204ENST00000372862 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
PABPC4-204ENST00000372862 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
PABPC4-204ENST00000372862 CSAG1Q6PB30 78 aa10.02□□□□□ -0.81
PABPC4-204ENST00000372862 MUC17Q685J3 4493 aa9.95□□□□□ -0.82
PABPC4-204ENST00000372862 P0C880 135 aa9.93□□□□□ -0.82
PABPC4-204ENST00000372862 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
PABPC4-204ENST00000372862 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
PABPC4-204ENST00000372862 K7ERS5 55 aa9.87□□□□□ -0.83
PABPC4-204ENST00000372862 KRTAP13-4Q3LI77 160 aa9.87□□□□□ -0.83
PABPC4-204ENST00000372862 A0A0D9SG42 100 aa9.77□□□□□ -0.85
PABPC4-204ENST00000372862 PRAC1Q96KF2 57 aa9.74□□□□□ -0.85
PABPC4-204ENST00000372862 KRTAP19-2Q3LHN2 52 aa9.72□□□□□ -0.85
PABPC4-204ENST00000372862 M0QZ58 72 aa9.7□□□□□ -0.86
PABPC4-204ENST00000372862 PCLOQ9Y6V0 5065 aa9.7□□□□□ -0.86
PABPC4-204ENST00000372862 HERC1Q15751 4861 aa9.63□□□□□ -0.87
PABPC4-204ENST00000372862 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
PABPC4-204ENST00000372862 R4GN34 69 aa9.55□□□□□ -0.88
PABPC4-204ENST00000372862 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
PABPC4-204ENST00000372862 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
PABPC4-204ENST00000372862 ROMO1P60602 79 aa9.52□□□□□ -0.89
PABPC4-204ENST00000372862 SPINT4Q6UDR6 99 aa9.51□□□□□ -0.89
PABPC4-204ENST00000372862 MUC2Q02817 5179 aa9.49□□□□□ -0.89
PABPC4-204ENST00000372862 FLGP20930 4061 aaPredicted RBP9.48□□□□□ -0.89
PABPC4-204ENST00000372862 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
PABPC4-204ENST00000372862 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
PABPC4-204ENST00000372862 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
PABPC4-204ENST00000372862 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
PABPC4-204ENST00000372862 CRIPTQ9P021 101 aa9.3□□□□□ -0.92
PABPC4-204ENST00000372862 RNF213Q63HN8 5207 aa9.13□□□□□ -0.95
PABPC4-204ENST00000372862 M0R2T5 61 aa9.13□□□□□ -0.95
PABPC4-204ENST00000372862 MT1HP80294 61 aa9.1□□□□□ -0.95
PABPC4-204ENST00000372862 UBR4Q5T4S7 5183 aa9.08□□□□□ -0.96
PABPC4-204ENST00000372862 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
PABPC4-204ENST00000372862 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
PABPC4-204ENST00000372862 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
PABPC4-204ENST00000372862 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
PABPC4-204ENST00000372862 MT2AP02795 61 aa8.86□□□□□ -0.99
PABPC4-204ENST00000372862 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
PABPC4-204ENST00000372862 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
PABPC4-204ENST00000372862 KRTAP9-8Q9BYQ0 159 aa8.83□□□□□ -1
PABPC4-204ENST00000372862 MT1FP04733 61 aa8.82□□□□□ -1
PABPC4-204ENST00000372862 PLAC4Q8WY50 150 aa8.78□□□□□ -1
PABPC4-204ENST00000372862 TNP1P09430 55 aa8.64□□□□□ -1.03
PABPC4-204ENST00000372862 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
PABPC4-204ENST00000372862 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
PABPC4-204ENST00000372862 H3BS24 57 aa8.49□□□□□ -1.05
PABPC4-204ENST00000372862 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
PABPC4-204ENST00000372862 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
PABPC4-204ENST00000372862 MT1BP07438 61 aa8.45□□□□□ -1.06
PABPC4-204ENST00000372862 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
PABPC4-204ENST00000372862 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
PABPC4-204ENST00000372862 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
PABPC4-204ENST00000372862 MT1XP80297 61 aa8.29□□□□□ -1.08
PABPC4-204ENST00000372862 LCE2BO14633 110 aa8.19□□□□□ -1.1
PABPC4-204ENST00000372862 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
PABPC4-204ENST00000372862 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
PABPC4-204ENST00000372862 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
PABPC4-204ENST00000372862 NDUFAF8A1L188 74 aa8.02□□□□□ -1.13
PABPC4-204ENST00000372862 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
PABPC4-204ENST00000372862 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
PABPC4-204ENST00000372862 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
PABPC4-204ENST00000372862 KRTAP12-3P60328 96 aa7.84□□□□□ -1.16
PABPC4-204ENST00000372862 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
PABPC4-204ENST00000372862 USH2AO75445 5202 aa7.82□□□□□ -1.16
PABPC4-204ENST00000372862 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
PABPC4-204ENST00000372862 KRTAP4-8A0A0G2JLE6 195 aa7.58□□□□□ -1.2
PABPC4-204ENST00000372862 KRTAP4-8Q9BYQ9 185 aa7.58□□□□□ -1.2
PABPC4-204ENST00000372862 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
PABPC4-204ENST00000372862 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
PABPC4-204ENST00000372862 KMT2DO14686 5537 aa7.5□□□□□ -1.21
PABPC4-204ENST00000372862 LCE2DQ5TA82 110 aaPredicted RBP7.41□□□□□ -1.22
PABPC4-204ENST00000372862 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
PABPC4-204ENST00000372862 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
PABPC4-204ENST00000372862 FSIP2Q5CZC0 6907 aa7.3□□□□□ -1.24
PABPC4-204ENST00000372862 MT1EP04732 61 aa7.22□□□□□ -1.25
PABPC4-204ENST00000372862 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
PABPC4-204ENST00000372862 MT1LQ93083 61 aa7.16□□□□□ -1.26
PABPC4-204ENST00000372862 A0A0A0MQY5 61 aa7.15□□□□□ -1.26
PABPC4-204ENST00000372862 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
PABPC4-204ENST00000372862 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
PABPC4-204ENST00000372862 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
PABPC4-204ENST00000372862 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
PABPC4-204ENST00000372862 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms