RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 XP32Q5T750 250 aa10.75□□□□□ -0.69
VEGFA-204ENST00000372064 EPPK1P58107 5090 aaKnown RBP10.71□□□□□ -0.7
VEGFA-204ENST00000372064 H0YAA0 97 aa10.57□□□□□ -0.72
VEGFA-204ENST00000372064 A0A1B0GU33 70 aa10.56□□□□□ -0.72
VEGFA-204ENST00000372064 H1FX-AS1Q4G0G2 97 aa10.54□□□□□ -0.72
VEGFA-204ENST00000372064 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
VEGFA-204ENST00000372064 H3BS24 57 aa10.49□□□□□ -0.73
VEGFA-204ENST00000372064 KRTAP4-5Q9BYR2 181 aa10.49□□□□□ -0.73
VEGFA-204ENST00000372064 TPRXLQ17RH7 258 aa10.45□□□□□ -0.74
VEGFA-204ENST00000372064 RBM12B-AS1Q9P1G2 102 aa10.45□□□□□ -0.74
VEGFA-204ENST00000372064 LRP2P98164 4655 aa10.43□□□□□ -0.74
VEGFA-204ENST00000372064 S4R3F8 94 aa10.42□□□□□ -0.74
VEGFA-204ENST00000372064 LPAP08519 4548 aa10.41□□□□□ -0.74
VEGFA-204ENST00000372064 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
VEGFA-204ENST00000372064 ABCA13Q86UQ4 5058 aa10.37□□□□□ -0.75
VEGFA-204ENST00000372064 KRTAP10-6P60371 365 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-204ENST00000372064 PRAC1Q96KF2 57 aa10.36□□□□□ -0.75
VEGFA-204ENST00000372064 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
VEGFA-204ENST00000372064 KRTAP13-4Q3LI77 160 aa10.19□□□□□ -0.78
VEGFA-204ENST00000372064 P0C880 135 aa10.14□□□□□ -0.79
VEGFA-204ENST00000372064 K7ERS5 55 aa10.13□□□□□ -0.79
VEGFA-204ENST00000372064 HERC2O95714 4834 aa10.12□□□□□ -0.79
VEGFA-204ENST00000372064 J3QL48 77 aa10.12□□□□□ -0.79
VEGFA-204ENST00000372064 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
VEGFA-204ENST00000372064 SEC61BP60468 96 aaKnown RBP10.05□□□□□ -0.8
VEGFA-204ENST00000372064 A0A0D9SG42 100 aa10.04□□□□□ -0.8
VEGFA-204ENST00000372064 MUC17Q685J3 4493 aa9.99□□□□□ -0.81
VEGFA-204ENST00000372064 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
VEGFA-204ENST00000372064 KRTAP4-1Q9BYQ7 146 aa9.96□□□□□ -0.81
VEGFA-204ENST00000372064 BIRC6Q9NR09 4857 aa9.95□□□□□ -0.82
VEGFA-204ENST00000372064 KRTAP25-1Q3LHN0 102 aa9.92□□□□□ -0.82
VEGFA-204ENST00000372064 ROMO1P60602 79 aa9.9□□□□□ -0.82
VEGFA-204ENST00000372064 M0QZ58 72 aa9.87□□□□□ -0.83
VEGFA-204ENST00000372064 KRTAP12-2P59991 146 aa9.84□□□□□ -0.83
VEGFA-204ENST00000372064 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
VEGFA-204ENST00000372064 KRTAP19-2Q3LHN2 52 aa9.76□□□□□ -0.85
VEGFA-204ENST00000372064 CRIPTQ9P021 101 aa9.76□□□□□ -0.85
VEGFA-204ENST00000372064 SPINT4Q6UDR6 99 aa9.72□□□□□ -0.85
VEGFA-204ENST00000372064 MUC2Q02817 5179 aa9.65□□□□□ -0.86
VEGFA-204ENST00000372064 R4GN34 69 aa9.62□□□□□ -0.87
VEGFA-204ENST00000372064 HERC1Q15751 4861 aa9.62□□□□□ -0.87
VEGFA-204ENST00000372064 PCLOQ9Y6V0 5065 aa9.61□□□□□ -0.87
VEGFA-204ENST00000372064 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
VEGFA-204ENST00000372064 A0A0A0MQY5 61 aa9.56□□□□□ -0.88
VEGFA-204ENST00000372064 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
VEGFA-204ENST00000372064 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-204ENST00000372064 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
VEGFA-204ENST00000372064 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
VEGFA-204ENST00000372064 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
VEGFA-204ENST00000372064 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
VEGFA-204ENST00000372064 RNF213Q63HN8 5207 aa9.11□□□□□ -0.95
VEGFA-204ENST00000372064 CAMK2N1Q7Z7J9 78 aa9.1□□□□□ -0.95
VEGFA-204ENST00000372064 M0R2T5 61 aa9.03□□□□□ -0.96
VEGFA-204ENST00000372064 MT1HP80294 61 aa9.03□□□□□ -0.96
VEGFA-204ENST00000372064 KRTAP15-1Q3LI76 137 aa9□□□□□ -0.97
VEGFA-204ENST00000372064 SPRR2GQ9BYE4 73 aa8.94□□□□□ -0.98
VEGFA-204ENST00000372064 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
VEGFA-204ENST00000372064 PP632Q6XCG6 107 aa8.89□□□□□ -0.99
VEGFA-204ENST00000372064 MT2AP02795 61 aa8.83□□□□□ -1
VEGFA-204ENST00000372064 MT1FP04733 61 aa8.82□□□□□ -1
VEGFA-204ENST00000372064 KRTAP10-10P60014 251 aa8.79□□□□□ -1
VEGFA-204ENST00000372064 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
VEGFA-204ENST00000372064 TNP1P09430 55 aa8.77□□□□□ -1.01
VEGFA-204ENST00000372064 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
VEGFA-204ENST00000372064 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.02
VEGFA-204ENST00000372064 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
VEGFA-204ENST00000372064 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
VEGFA-204ENST00000372064 MT1BP07438 61 aa8.47□□□□□ -1.05
VEGFA-204ENST00000372064 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
VEGFA-204ENST00000372064 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
VEGFA-204ENST00000372064 MT1XP80297 61 aa8.34□□□□□ -1.07
VEGFA-204ENST00000372064 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
VEGFA-204ENST00000372064 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
VEGFA-204ENST00000372064 SPRR5A0A1B0GTR4 108 aa8.23□□□□□ -1.09
VEGFA-204ENST00000372064 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-204ENST00000372064 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
VEGFA-204ENST00000372064 LCE2BO14633 110 aa8.14□□□□□ -1.11
VEGFA-204ENST00000372064 KRTAP10-7P60409 375 aaPredicted RBP8.09□□□□□ -1.11
VEGFA-204ENST00000372064 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
VEGFA-204ENST00000372064 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-204ENST00000372064 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
VEGFA-204ENST00000372064 USH2AO75445 5202 aa7.99□□□□□ -1.13
VEGFA-204ENST00000372064 KRTAP12-3P60328 96 aa7.95□□□□□ -1.14
VEGFA-204ENST00000372064 KMT2DO14686 5537 aa7.72□□□□□ -1.17
VEGFA-204ENST00000372064 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
VEGFA-204ENST00000372064 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
VEGFA-204ENST00000372064 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
VEGFA-204ENST00000372064 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
VEGFA-204ENST00000372064 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
VEGFA-204ENST00000372064 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
VEGFA-204ENST00000372064 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
VEGFA-204ENST00000372064 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
VEGFA-204ENST00000372064 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
VEGFA-204ENST00000372064 MT1EP04732 61 aa7.24□□□□□ -1.25
VEGFA-204ENST00000372064 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
VEGFA-204ENST00000372064 MT1LQ93083 61 aa7.21□□□□□ -1.26
VEGFA-204ENST00000372064 KRTAP9-6A8MVA2 160 aa7.19□□□□□ -1.26
VEGFA-204ENST00000372064 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
VEGFA-204ENST00000372064 INE1O15225 51 aa7.02□□□□□ -1.29
VEGFA-204ENST00000372064 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms