RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.64
SMARCA1-202ENST00000371122 PKHD1L1Q86WI1 4243 aa4.83□□□□□ -1.64
SMARCA1-202ENST00000371122 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
SMARCA1-202ENST00000371122 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
SMARCA1-202ENST00000371122 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
SMARCA1-202ENST00000371122 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
SMARCA1-202ENST00000371122 LRP1BQ9NZR2 4599 aa4.81□□□□□ -1.64
SMARCA1-202ENST00000371122 XP32Q5T750 250 aa4.81□□□□□ -1.64
SMARCA1-202ENST00000371122 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
SMARCA1-202ENST00000371122 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
SMARCA1-202ENST00000371122 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
SMARCA1-202ENST00000371122 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
SMARCA1-202ENST00000371122 H0YAA0 97 aa4.77□□□□□ -1.65
SMARCA1-202ENST00000371122 P0C880 135 aa4.76□□□□□ -1.65
SMARCA1-202ENST00000371122 HSPG2P98160 4391 aa4.75□□□□□ -1.65
SMARCA1-202ENST00000371122 RYR1P21817 5038 aa4.74□□□□□ -1.65
SMARCA1-202ENST00000371122 HERC2O95714 4834 aa4.71□□□□□ -1.66
SMARCA1-202ENST00000371122 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
SMARCA1-202ENST00000371122 KRTAP13-3Q3SY46 172 aa4.7□□□□□ -1.66
SMARCA1-202ENST00000371122 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
SMARCA1-202ENST00000371122 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
SMARCA1-202ENST00000371122 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
SMARCA1-202ENST00000371122 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
SMARCA1-202ENST00000371122 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
SMARCA1-202ENST00000371122 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
SMARCA1-202ENST00000371122 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
SMARCA1-202ENST00000371122 LPAP08519 4548 aa4.59□□□□□ -1.67
SMARCA1-202ENST00000371122 MYCBP2O75592 4640 aa4.59□□□□□ -1.67
SMARCA1-202ENST00000371122 FAT1Q14517 4588 aa4.57□□□□□ -1.68
SMARCA1-202ENST00000371122 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
SMARCA1-202ENST00000371122 TNXBP22105 4242 aa4.53□□□□□ -1.68
SMARCA1-202ENST00000371122 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
SMARCA1-202ENST00000371122 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
SMARCA1-202ENST00000371122 TNP1P09430 55 aa4.51□□□□□ -1.69
SMARCA1-202ENST00000371122 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
SMARCA1-202ENST00000371122 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
SMARCA1-202ENST00000371122 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
SMARCA1-202ENST00000371122 PCLOQ9Y6V0 5065 aa4.46□□□□□ -1.7
SMARCA1-202ENST00000371122 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
SMARCA1-202ENST00000371122 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
SMARCA1-202ENST00000371122 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
SMARCA1-202ENST00000371122 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
SMARCA1-202ENST00000371122 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
SMARCA1-202ENST00000371122 KRTAP3-3Q9BYR6 98 aa4.3□□□□□ -1.72
SMARCA1-202ENST00000371122 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
SMARCA1-202ENST00000371122 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
SMARCA1-202ENST00000371122 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
SMARCA1-202ENST00000371122 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
SMARCA1-202ENST00000371122 HERC1Q15751 4861 aa4.23□□□□□ -1.73
SMARCA1-202ENST00000371122 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
SMARCA1-202ENST00000371122 LRP2P98164 4655 aa4.12□□□□□ -1.75
SMARCA1-202ENST00000371122 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
SMARCA1-202ENST00000371122 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.76
SMARCA1-202ENST00000371122 MUC2Q02817 5179 aa4.08□□□□□ -1.76
SMARCA1-202ENST00000371122 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
SMARCA1-202ENST00000371122 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
SMARCA1-202ENST00000371122 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
SMARCA1-202ENST00000371122 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
SMARCA1-202ENST00000371122 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
SMARCA1-202ENST00000371122 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SMARCA1-202ENST00000371122 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
SMARCA1-202ENST00000371122 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
SMARCA1-202ENST00000371122 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
SMARCA1-202ENST00000371122 LCE2CQ5TA81 110 aa3.81□□□□□ -1.8
SMARCA1-202ENST00000371122 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
SMARCA1-202ENST00000371122 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
SMARCA1-202ENST00000371122 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-202ENST00000371122 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
SMARCA1-202ENST00000371122 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SMARCA1-202ENST00000371122 MT1HP80294 61 aa3.74□□□□□ -1.81
SMARCA1-202ENST00000371122 MT2AP02795 61 aa3.71□□□□□ -1.81
SMARCA1-202ENST00000371122 MT1FP04733 61 aa3.71□□□□□ -1.82
SMARCA1-202ENST00000371122 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
SMARCA1-202ENST00000371122 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
SMARCA1-202ENST00000371122 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
SMARCA1-202ENST00000371122 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
SMARCA1-202ENST00000371122 KMT2DO14686 5537 aa3.47□□□□□ -1.85
SMARCA1-202ENST00000371122 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
SMARCA1-202ENST00000371122 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
SMARCA1-202ENST00000371122 KRTAP9-3Q9BYQ3 159 aa3.44□□□□□ -1.86
SMARCA1-202ENST00000371122 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
SMARCA1-202ENST00000371122 INE1O15225 51 aa3.43□□□□□ -1.86
SMARCA1-202ENST00000371122 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
SMARCA1-202ENST00000371122 MT1XP80297 61 aa3.39□□□□□ -1.87
SMARCA1-202ENST00000371122 MT1BP07438 61 aa3.39□□□□□ -1.87
SMARCA1-202ENST00000371122 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
SMARCA1-202ENST00000371122 USH2AO75445 5202 aa3.35□□□□□ -1.87
SMARCA1-202ENST00000371122 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-202ENST00000371122 LCE2BO14633 110 aa3.34□□□□□ -1.88
SMARCA1-202ENST00000371122 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SMARCA1-202ENST00000371122 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
SMARCA1-202ENST00000371122 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
SMARCA1-202ENST00000371122 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
SMARCA1-202ENST00000371122 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
SMARCA1-202ENST00000371122 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms