RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.64
SMARCA1-202ENST00000371122 PKHD1L1Q86WI1 4243 aa4.83□□□□□ -1.64
SMARCA1-202ENST00000371122 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
SMARCA1-202ENST00000371122 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
SMARCA1-202ENST00000371122 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
SMARCA1-202ENST00000371122 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
SMARCA1-202ENST00000371122 LRP1BQ9NZR2 4599 aa4.81□□□□□ -1.64
SMARCA1-202ENST00000371122 XP32Q5T750 250 aa4.81□□□□□ -1.64
SMARCA1-202ENST00000371122 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
SMARCA1-202ENST00000371122 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
SMARCA1-202ENST00000371122 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
SMARCA1-202ENST00000371122 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
SMARCA1-202ENST00000371122 H0YAA0 97 aa4.77□□□□□ -1.65
SMARCA1-202ENST00000371122 P0C880 135 aa4.76□□□□□ -1.65
SMARCA1-202ENST00000371122 HSPG2P98160 4391 aa4.75□□□□□ -1.65
SMARCA1-202ENST00000371122 RYR1P21817 5038 aa4.74□□□□□ -1.65
SMARCA1-202ENST00000371122 HERC2O95714 4834 aa4.71□□□□□ -1.66
SMARCA1-202ENST00000371122 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
SMARCA1-202ENST00000371122 KRTAP13-3Q3SY46 172 aa4.7□□□□□ -1.66
SMARCA1-202ENST00000371122 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
SMARCA1-202ENST00000371122 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
SMARCA1-202ENST00000371122 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
SMARCA1-202ENST00000371122 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
SMARCA1-202ENST00000371122 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
SMARCA1-202ENST00000371122 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
SMARCA1-202ENST00000371122 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
SMARCA1-202ENST00000371122 LPAP08519 4548 aa4.59□□□□□ -1.67
SMARCA1-202ENST00000371122 MYCBP2O75592 4640 aa4.59□□□□□ -1.67
SMARCA1-202ENST00000371122 FAT1Q14517 4588 aa4.57□□□□□ -1.68
SMARCA1-202ENST00000371122 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
SMARCA1-202ENST00000371122 TNXBP22105 4242 aa4.53□□□□□ -1.68
SMARCA1-202ENST00000371122 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
SMARCA1-202ENST00000371122 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
SMARCA1-202ENST00000371122 TNP1P09430 55 aa4.51□□□□□ -1.69
SMARCA1-202ENST00000371122 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
SMARCA1-202ENST00000371122 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
SMARCA1-202ENST00000371122 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
SMARCA1-202ENST00000371122 PCLOQ9Y6V0 5065 aa4.46□□□□□ -1.7
SMARCA1-202ENST00000371122 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
SMARCA1-202ENST00000371122 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
SMARCA1-202ENST00000371122 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
SMARCA1-202ENST00000371122 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
SMARCA1-202ENST00000371122 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
SMARCA1-202ENST00000371122 KRTAP3-3Q9BYR6 98 aa4.3□□□□□ -1.72
SMARCA1-202ENST00000371122 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
SMARCA1-202ENST00000371122 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
SMARCA1-202ENST00000371122 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
SMARCA1-202ENST00000371122 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
SMARCA1-202ENST00000371122 HERC1Q15751 4861 aa4.23□□□□□ -1.73
SMARCA1-202ENST00000371122 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
SMARCA1-202ENST00000371122 LRP2P98164 4655 aa4.12□□□□□ -1.75
SMARCA1-202ENST00000371122 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
SMARCA1-202ENST00000371122 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.76
SMARCA1-202ENST00000371122 MUC2Q02817 5179 aa4.08□□□□□ -1.76
SMARCA1-202ENST00000371122 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
SMARCA1-202ENST00000371122 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
SMARCA1-202ENST00000371122 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
SMARCA1-202ENST00000371122 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
SMARCA1-202ENST00000371122 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
SMARCA1-202ENST00000371122 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SMARCA1-202ENST00000371122 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
SMARCA1-202ENST00000371122 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
SMARCA1-202ENST00000371122 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
SMARCA1-202ENST00000371122 LCE2CQ5TA81 110 aa3.81□□□□□ -1.8
SMARCA1-202ENST00000371122 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
SMARCA1-202ENST00000371122 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
SMARCA1-202ENST00000371122 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-202ENST00000371122 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
SMARCA1-202ENST00000371122 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SMARCA1-202ENST00000371122 MT1HP80294 61 aa3.74□□□□□ -1.81
SMARCA1-202ENST00000371122 MT2AP02795 61 aa3.71□□□□□ -1.81
SMARCA1-202ENST00000371122 MT1FP04733 61 aa3.71□□□□□ -1.82
SMARCA1-202ENST00000371122 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
SMARCA1-202ENST00000371122 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
SMARCA1-202ENST00000371122 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
SMARCA1-202ENST00000371122 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
SMARCA1-202ENST00000371122 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
SMARCA1-202ENST00000371122 KMT2DO14686 5537 aa3.47□□□□□ -1.85
SMARCA1-202ENST00000371122 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
SMARCA1-202ENST00000371122 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
SMARCA1-202ENST00000371122 KRTAP9-3Q9BYQ3 159 aa3.44□□□□□ -1.86
SMARCA1-202ENST00000371122 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
SMARCA1-202ENST00000371122 INE1O15225 51 aa3.43□□□□□ -1.86
SMARCA1-202ENST00000371122 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
SMARCA1-202ENST00000371122 MT1XP80297 61 aa3.39□□□□□ -1.87
SMARCA1-202ENST00000371122 MT1BP07438 61 aa3.39□□□□□ -1.87
SMARCA1-202ENST00000371122 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
SMARCA1-202ENST00000371122 USH2AO75445 5202 aa3.35□□□□□ -1.87
SMARCA1-202ENST00000371122 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-202ENST00000371122 LCE2BO14633 110 aa3.34□□□□□ -1.88
SMARCA1-202ENST00000371122 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SMARCA1-202ENST00000371122 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
SMARCA1-202ENST00000371122 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
SMARCA1-202ENST00000371122 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
SMARCA1-202ENST00000371122 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
SMARCA1-202ENST00000371122 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms