RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 KMT2CQ8NEZ4 4911 aaKnown RBP8.2□□□□□ -1.1
PHACTR3-204ENST00000371015 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
PHACTR3-204ENST00000371015 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
PHACTR3-204ENST00000371015 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
PHACTR3-204ENST00000371015 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
PHACTR3-204ENST00000371015 BIRC6Q9NR09 4857 aa8.16□□□□□ -1.1
PHACTR3-204ENST00000371015 RYR3Q15413 4870 aa8.15□□□□□ -1.11
PHACTR3-204ENST00000371015 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
PHACTR3-204ENST00000371015 LRP1BQ9NZR2 4599 aa8.09□□□□□ -1.11
PHACTR3-204ENST00000371015 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
PHACTR3-204ENST00000371015 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
PHACTR3-204ENST00000371015 DYNC1H1Q14204 4646 aaKnown RBP8.07□□□□□ -1.12
PHACTR3-204ENST00000371015 HYDINQ4G0P3 5121 aa8.05□□□□□ -1.12
PHACTR3-204ENST00000371015 PKD1P98161 4303 aa8.01□□□□□ -1.13
PHACTR3-204ENST00000371015 FAT2Q9NYQ8 4349 aa8□□□□□ -1.13
PHACTR3-204ENST00000371015 VPS13BQ7Z7G8 4022 aa7.99□□□□□ -1.13
PHACTR3-204ENST00000371015 M0QZ58 72 aa7.98□□□□□ -1.13
PHACTR3-204ENST00000371015 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
PHACTR3-204ENST00000371015 HERC2O95714 4834 aa7.88□□□□□ -1.15
PHACTR3-204ENST00000371015 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
PHACTR3-204ENST00000371015 EPPK1P58107 5090 aaKnown RBP7.83□□□□□ -1.16
PHACTR3-204ENST00000371015 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
PHACTR3-204ENST00000371015 Q5VSD8 79 aa7.79□□□□□ -1.16
PHACTR3-204ENST00000371015 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
PHACTR3-204ENST00000371015 RYR1P21817 5038 aa7.77□□□□□ -1.17
PHACTR3-204ENST00000371015 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
PHACTR3-204ENST00000371015 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
PHACTR3-204ENST00000371015 APOBP04114 4563 aaKnown RBP7.72□□□□□ -1.17
PHACTR3-204ENST00000371015 HSPG2P98160 4391 aa7.69□□□□□ -1.18
PHACTR3-204ENST00000371015 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
PHACTR3-204ENST00000371015 KRTAP10-8P60410 259 aa7.65□□□□□ -1.18
PHACTR3-204ENST00000371015 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
PHACTR3-204ENST00000371015 INE1O15225 51 aa7.57□□□□□ -1.2
PHACTR3-204ENST00000371015 FAT1Q14517 4588 aa7.56□□□□□ -1.2
PHACTR3-204ENST00000371015 J3QL48 77 aa7.56□□□□□ -1.2
PHACTR3-204ENST00000371015 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
PHACTR3-204ENST00000371015 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
PHACTR3-204ENST00000371015 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
PHACTR3-204ENST00000371015 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
PHACTR3-204ENST00000371015 R4GN34 69 aa7.43□□□□□ -1.22
PHACTR3-204ENST00000371015 PCLOQ9Y6V0 5065 aa7.42□□□□□ -1.22
PHACTR3-204ENST00000371015 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.23
PHACTR3-204ENST00000371015 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
PHACTR3-204ENST00000371015 LCE2DQ5TA82 110 aaPredicted RBP7.36□□□□□ -1.23
PHACTR3-204ENST00000371015 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
PHACTR3-204ENST00000371015 TNXBP22105 4242 aa7.34□□□□□ -1.23
PHACTR3-204ENST00000371015 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
PHACTR3-204ENST00000371015 MYCBP2O75592 4640 aa7.27□□□□□ -1.25
PHACTR3-204ENST00000371015 TNP1P09430 55 aa7.1□□□□□ -1.27
PHACTR3-204ENST00000371015 LPAP08519 4548 aa6.97□□□□□ -1.29
PHACTR3-204ENST00000371015 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
PHACTR3-204ENST00000371015 LRP2P98164 4655 aa6.93□□□□□ -1.3
PHACTR3-204ENST00000371015 HERC1Q15751 4861 aa6.92□□□□□ -1.3
PHACTR3-204ENST00000371015 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
PHACTR3-204ENST00000371015 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
PHACTR3-204ENST00000371015 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
PHACTR3-204ENST00000371015 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
PHACTR3-204ENST00000371015 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
PHACTR3-204ENST00000371015 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
PHACTR3-204ENST00000371015 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
PHACTR3-204ENST00000371015 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
PHACTR3-204ENST00000371015 LCE2BO14633 110 aa6.41□□□□□ -1.38
PHACTR3-204ENST00000371015 KRTAP10-10P60014 251 aa6.4□□□□□ -1.38
PHACTR3-204ENST00000371015 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
PHACTR3-204ENST00000371015 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
PHACTR3-204ENST00000371015 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
PHACTR3-204ENST00000371015 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
PHACTR3-204ENST00000371015 MT1HP80294 61 aa6.24□□□□□ -1.41
PHACTR3-204ENST00000371015 MUC2Q02817 5179 aa6.2□□□□□ -1.42
PHACTR3-204ENST00000371015 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
PHACTR3-204ENST00000371015 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
PHACTR3-204ENST00000371015 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
PHACTR3-204ENST00000371015 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
PHACTR3-204ENST00000371015 M0R2T5 61 aa6.1□□□□□ -1.43
PHACTR3-204ENST00000371015 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
PHACTR3-204ENST00000371015 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
PHACTR3-204ENST00000371015 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
PHACTR3-204ENST00000371015 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
PHACTR3-204ENST00000371015 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
PHACTR3-204ENST00000371015 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
PHACTR3-204ENST00000371015 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
PHACTR3-204ENST00000371015 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
PHACTR3-204ENST00000371015 MT2AP02795 61 aa5.88□□□□□ -1.47
PHACTR3-204ENST00000371015 MT1FP04733 61 aa5.88□□□□□ -1.47
PHACTR3-204ENST00000371015 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
PHACTR3-204ENST00000371015 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
PHACTR3-204ENST00000371015 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
PHACTR3-204ENST00000371015 MT1XP80297 61 aa5.75□□□□□ -1.49
PHACTR3-204ENST00000371015 MT1BP07438 61 aa5.74□□□□□ -1.49
PHACTR3-204ENST00000371015 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
PHACTR3-204ENST00000371015 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.51
PHACTR3-204ENST00000371015 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
PHACTR3-204ENST00000371015 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
PHACTR3-204ENST00000371015 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
PHACTR3-204ENST00000371015 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.47□□□□□ -1.53
PHACTR3-204ENST00000371015 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
PHACTR3-204ENST00000371015 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
PHACTR3-204ENST00000371015 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
PHACTR3-204ENST00000371015 USH2AO75445 5202 aa5.35□□□□□ -1.55
PHACTR3-204ENST00000371015 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms