RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 MT1HL1P0DM35 61 aa11.09□□□□□ -0.63
SOX3-201ENST00000370536 LINC01554Q52M75 96 aa11.09□□□□□ -0.63
SOX3-201ENST00000370536 KRTAP3-1Q9BYR8 98 aa11.02□□□□□ -0.64
SOX3-201ENST00000370536 XP32Q5T750 250 aa10.99□□□□□ -0.65
SOX3-201ENST00000370536 RPL37P61927 97 aaKnown RBP10.98□□□□□ -0.65
SOX3-201ENST00000370536 CSAG1Q6PB30 78 aa10.96□□□□□ -0.65
SOX3-201ENST00000370536 H0YAA0 97 aa10.89□□□□□ -0.67
SOX3-201ENST00000370536 COX6B2Q6YFQ2 88 aa10.89□□□□□ -0.67
SOX3-201ENST00000370536 KRTAP4-5Q9BYR2 181 aa10.87□□□□□ -0.67
SOX3-201ENST00000370536 A0A1B0GU33 70 aa10.84□□□□□ -0.67
SOX3-201ENST00000370536 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
SOX3-201ENST00000370536 TPRXLQ17RH7 258 aa10.72□□□□□ -0.69
SOX3-201ENST00000370536 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.7
SOX3-201ENST00000370536 LRP2P98164 4655 aa10.69□□□□□ -0.7
SOX3-201ENST00000370536 KRTAP25-1Q3LHN0 102 aa10.67□□□□□ -0.7
SOX3-201ENST00000370536 LPAP08519 4548 aa10.66□□□□□ -0.7
SOX3-201ENST00000370536 K7ERS5 55 aa10.61□□□□□ -0.71
SOX3-201ENST00000370536 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
SOX3-201ENST00000370536 HERC2O95714 4834 aa10.54□□□□□ -0.72
SOX3-201ENST00000370536 S4R3F8 94 aa10.54□□□□□ -0.72
SOX3-201ENST00000370536 J3QL48 77 aa10.49□□□□□ -0.73
SOX3-201ENST00000370536 BIRC6Q9NR09 4857 aa10.48□□□□□ -0.73
SOX3-201ENST00000370536 ROMO1P60602 79 aa10.4□□□□□ -0.74
SOX3-201ENST00000370536 H3BS24 57 aa10.39□□□□□ -0.75
SOX3-201ENST00000370536 KRTAP10-6P60371 365 aaPredicted RBP10.37□□□□□ -0.75
SOX3-201ENST00000370536 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
SOX3-201ENST00000370536 CRIPTQ9P021 101 aa10.34□□□□□ -0.75
SOX3-201ENST00000370536 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
SOX3-201ENST00000370536 MUC17Q685J3 4493 aa10.28□□□□□ -0.76
SOX3-201ENST00000370536 KRTAP13-4Q3LI77 160 aa10.28□□□□□ -0.76
SOX3-201ENST00000370536 P0C880 135 aa10.24□□□□□ -0.77
SOX3-201ENST00000370536 A0A0D9SG42 100 aa10.22□□□□□ -0.77
SOX3-201ENST00000370536 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.77
SOX3-201ENST00000370536 PCLOQ9Y6V0 5065 aa10.05□□□□□ -0.8
SOX3-201ENST00000370536 HERC1Q15751 4861 aa10.02□□□□□ -0.8
SOX3-201ENST00000370536 M0QZ58 72 aa9.98□□□□□ -0.81
SOX3-201ENST00000370536 KRTAP12-2P59991 146 aa9.98□□□□□ -0.81
SOX3-201ENST00000370536 SPINT4Q6UDR6 99 aa9.98□□□□□ -0.81
SOX3-201ENST00000370536 KRTAP19-2Q3LHN2 52 aa9.98□□□□□ -0.81
SOX3-201ENST00000370536 HMCN2Q8NDA2 5059 aa9.96□□□□□ -0.82
SOX3-201ENST00000370536 C10orf95Q9H7T3 257 aa9.95□□□□□ -0.82
SOX3-201ENST00000370536 KRTAP12-1P59990 96 aa9.92□□□□□ -0.82
SOX3-201ENST00000370536 MUC2Q02817 5179 aa9.89□□□□□ -0.83
SOX3-201ENST00000370536 KRTAP15-1Q3LI76 137 aa9.79□□□□□ -0.84
SOX3-201ENST00000370536 FLGP20930 4061 aaPredicted RBP9.78□□□□□ -0.84
SOX3-201ENST00000370536 R4GN34 69 aa9.74□□□□□ -0.85
SOX3-201ENST00000370536 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
SOX3-201ENST00000370536 NDUFAF8A1L188 74 aa9.6□□□□□ -0.87
SOX3-201ENST00000370536 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
SOX3-201ENST00000370536 RNF213Q63HN8 5207 aa9.49□□□□□ -0.89
SOX3-201ENST00000370536 FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
SOX3-201ENST00000370536 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.9
SOX3-201ENST00000370536 MT1HP80294 61 aa9.31□□□□□ -0.92
SOX3-201ENST00000370536 M0R2T5 61 aa9.28□□□□□ -0.92
SOX3-201ENST00000370536 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
SOX3-201ENST00000370536 CAMK2N1Q7Z7J9 78 aa9.21□□□□□ -0.94
SOX3-201ENST00000370536 PP632Q6XCG6 107 aa9.14□□□□□ -0.95
SOX3-201ENST00000370536 SPRR2GQ9BYE4 73 aa9.09□□□□□ -0.95
SOX3-201ENST00000370536 KRTAP19-1Q8IUB9 90 aa9.07□□□□□ -0.96
SOX3-201ENST00000370536 MT2AP02795 61 aa9.06□□□□□ -0.96
SOX3-201ENST00000370536 MT1FP04733 61 aa9.05□□□□□ -0.96
SOX3-201ENST00000370536 KRTAP9-8Q9BYQ0 159 aa9.04□□□□□ -0.96
SOX3-201ENST00000370536 KRTAP10-10P60014 251 aa9.02□□□□□ -0.96
SOX3-201ENST00000370536 LUZP6Q538Z0 58 aa8.91□□□□□ -0.98
SOX3-201ENST00000370536 TNP1P09430 55 aa8.88□□□□□ -0.99
SOX3-201ENST00000370536 A0A0A0MQY5 61 aa8.84□□□□□ -0.99
SOX3-201ENST00000370536 KRTAP23-1A1A580 65 aa8.81□□□□□ -1
SOX3-201ENST00000370536 KRTAP19-8Q3LI54 63 aa8.76□□□□□ -1.01
SOX3-201ENST00000370536 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
SOX3-201ENST00000370536 MT1BP07438 61 aa8.67□□□□□ -1.02
SOX3-201ENST00000370536 SPRR5A0A1B0GTR4 108 aa8.6□□□□□ -1.03
SOX3-201ENST00000370536 MT1XP80297 61 aa8.51□□□□□ -1.05
SOX3-201ENST00000370536 KRTAP10-5P60370 271 aa8.51□□□□□ -1.05
SOX3-201ENST00000370536 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
SOX3-201ENST00000370536 LCE3AQ5TA76 89 aa8.42□□□□□ -1.06
SOX3-201ENST00000370536 LCE2BO14633 110 aa8.39□□□□□ -1.07
SOX3-201ENST00000370536 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
SOX3-201ENST00000370536 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
SOX3-201ENST00000370536 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
SOX3-201ENST00000370536 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.09
SOX3-201ENST00000370536 USH2AO75445 5202 aa8.2□□□□□ -1.1
SOX3-201ENST00000370536 KRTAP12-3P60328 96 aa8.02□□□□□ -1.13
SOX3-201ENST00000370536 KMT2DO14686 5537 aa7.88□□□□□ -1.15
SOX3-201ENST00000370536 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.16
SOX3-201ENST00000370536 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
SOX3-201ENST00000370536 KRTAP4-8A0A0G2JLE6 195 aa7.82□□□□□ -1.16
SOX3-201ENST00000370536 INE1O15225 51 aa7.82□□□□□ -1.16
SOX3-201ENST00000370536 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
SOX3-201ENST00000370536 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
SOX3-201ENST00000370536 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
SOX3-201ENST00000370536 FSIP2Q5CZC0 6907 aa7.58□□□□□ -1.2
SOX3-201ENST00000370536 LCE3CQ5T5A8 94 aa7.53□□□□□ -1.2
SOX3-201ENST00000370536 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.21
SOX3-201ENST00000370536 MT1EP04732 61 aa7.4□□□□□ -1.23
SOX3-201ENST00000370536 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
SOX3-201ENST00000370536 FCGBPQ9Y6R7 5405 aaPredicted RBP7.35□□□□□ -1.23
SOX3-201ENST00000370536 MT1LQ93083 61 aa7.33□□□□□ -1.24
SOX3-201ENST00000370536 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
SOX3-201ENST00000370536 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
SOX3-201ENST00000370536 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms